RNA–Protein interactions for RNA: ENST00000586190.1

CACNA1A-207, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 459 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-207ENST00000586190 MAP3K12Q12852 859 aa22.42■■□□□ 1.18
CACNA1A-207ENST00000586190 AACSQ86V21 672 aa22.42■■□□□ 1.18
CACNA1A-207ENST00000586190 TRIM34Q9BYJ4 488 aa22.42■■□□□ 1.18
CACNA1A-207ENST00000586190 JAG1P78504 1218 aa22.41■■□□□ 1.18
CACNA1A-207ENST00000586190 MTMR2Q13614 643 aa22.41■■□□□ 1.18
CACNA1A-207ENST00000586190 RPAP2Q8IXW5 612 aaPredicted RBP22.41■■□□□ 1.18
CACNA1A-207ENST00000586190 MAGEB6Q8N7X4 407 aa22.41■■□□□ 1.18
CACNA1A-207ENST00000586190 MORF4L1Q9UBU8 362 aa22.41■■□□□ 1.18
CACNA1A-207ENST00000586190 ZBTB21Q9ULJ3 1066 aa22.41■■□□□ 1.18
CACNA1A-207ENST00000586190 USP17L10C9JJH3 530 aa22.4■■□□□ 1.18
CACNA1A-207ENST00000586190 RHPN1Q8TCX5 695 aa22.4■■□□□ 1.18
CACNA1A-207ENST00000586190 U2AF1L4Q8WU68 220 aaKnown RBP22.4■■□□□ 1.18
CACNA1A-207ENST00000586190 EHD4Q9H223 541 aa22.4■■□□□ 1.18
CACNA1A-207ENST00000586190 ANTXR1Q9H6X2 564 aa22.4■■□□□ 1.18
CACNA1A-207ENST00000586190 TMOD4Q9NZQ9 345 aa22.4■■□□□ 1.18
CACNA1A-207ENST00000586190 SGPL1O95470 568 aa22.39■■□□□ 1.17
CACNA1A-207ENST00000586190 INHAP05111 366 aa22.39■■□□□ 1.17
CACNA1A-207ENST00000586190 ELNP15502 786 aa22.39■■□□□ 1.17
CACNA1A-207ENST00000586190 TTF1Q15361 905 aaPredicted RBP22.39■■□□□ 1.17
CACNA1A-207ENST00000586190 TATDN1Q6P1N9 297 aa22.39■■□□□ 1.17
CACNA1A-207ENST00000586190 MIGA1Q8NAN2 632 aa22.39■■□□□ 1.17
CACNA1A-207ENST00000586190 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.39■■□□□ 1.17
CACNA1A-207ENST00000586190 UNC93B1Q9H1C4 597 aa22.39■■□□□ 1.17
CACNA1A-207ENST00000586190 SAP30BPQ9UHR5 308 aaKnown RBP22.39■■□□□ 1.17
CACNA1A-207ENST00000586190 DDX19BQ9UMR2 479 aa22.39■■□□□ 1.17
CACNA1A-207ENST00000586190 GDF11O95390 407 aa22.38■■□□□ 1.17
CACNA1A-207ENST00000586190 USP5P45974 858 aa22.38■■□□□ 1.17
CACNA1A-207ENST00000586190 KIF1BPQ96EK5 621 aa22.38■■□□□ 1.17
CACNA1A-207ENST00000586190 ZBTB40Q9NUA8 1239 aa22.38■■□□□ 1.17
CACNA1A-207ENST00000586190 NDUFB9Q9Y6M9 179 aa22.38■■□□□ 1.17
CACNA1A-207ENST00000586190 HMMRO75330 724 aa22.37■■□□□ 1.17
CACNA1A-207ENST00000586190 IRX3P78415 501 aaPredicted RBP22.37■■□□□ 1.17
CACNA1A-207ENST00000586190 TTC6Q86TZ1 520 aa22.37■■□□□ 1.17
CACNA1A-207ENST00000586190 CLASRPQ8N2M8 674 aaKnown RBP22.37■■□□□ 1.17
CACNA1A-207ENST00000586190 RIOK1Q9BRS2 568 aaKnown RBP22.37■■□□□ 1.17
CACNA1A-207ENST00000586190 IL1RAPL2Q9NP60 686 aa22.37■■□□□ 1.17
CACNA1A-207ENST00000586190 PAK6Q9NQU5 681 aaPredicted RBP22.37■■□□□ 1.17
CACNA1A-207ENST00000586190 SERPINB13Q9UIV8 391 aa22.37■■□□□ 1.17
CACNA1A-207ENST00000586190 GJD2Q9UKL4 321 aa22.37■■□□□ 1.17
CACNA1A-207ENST00000586190 PLXNB2O15031 1838 aa22.36■■□□□ 1.17
CACNA1A-207ENST00000586190 SHROOM1Q2M3G4 852 aaPredicted RBP22.36■■□□□ 1.17
CACNA1A-207ENST00000586190 GTF3C2Q8WUA4 911 aaPredicted RBP22.36■■□□□ 1.17
CACNA1A-207ENST00000586190 P2RX7Q99572 595 aaKnown RBP22.36■■□□□ 1.17
CACNA1A-207ENST00000586190 HTATIP2Q9BUP3 242 aa22.36■■□□□ 1.17
CACNA1A-207ENST00000586190 CHMP4BQ9H444 224 aaKnown RBP22.36■■□□□ 1.17
CACNA1A-207ENST00000586190 DDX60LQ5H9U9 1706 aaKnown RBP22.36■■□□□ 1.17
CACNA1A-207ENST00000586190 H0YGN5 161 aa22.35■■□□□ 1.17
CACNA1A-207ENST00000586190 HERVK_113P62684 666 aa22.35■■□□□ 1.17
CACNA1A-207ENST00000586190 USP17L2Q6R6M4 530 aa22.35■■□□□ 1.17
CACNA1A-207ENST00000586190 SIRT2Q8IXJ6 389 aa22.35■■□□□ 1.17
CACNA1A-207ENST00000586190 C12orf42Q96LP6 360 aa22.35■■□□□ 1.17
CACNA1A-207ENST00000586190 CRISPLD2Q9H0B8 497 aa22.35■■□□□ 1.17
CACNA1A-207ENST00000586190 RAB11FIP3O75154 756 aa22.34■■□□□ 1.17
CACNA1A-207ENST00000586190 FARP2O94887 1054 aaPredicted RBP22.34■■□□□ 1.17
CACNA1A-207ENST00000586190 GH2P01242 217 aa22.34■■□□□ 1.17
CACNA1A-207ENST00000586190 EMILIN3Q9NT22 766 aa22.34■■□□□ 1.17
CACNA1A-207ENST00000586190 HMGCRP04035 888 aa22.33■■□□□ 1.17
CACNA1A-207ENST00000586190 GPRC5AQ8NFJ5 357 aa22.33■■□□□ 1.17
CACNA1A-207ENST00000586190 DPF3Q92784 378 aa22.33■■□□□ 1.17
CACNA1A-207ENST00000586190 NAV1Q8NEY1 1877 aa22.32■■□□□ 1.16
CACNA1A-207ENST00000586190 MAGEB6P1A0A0J9YX57 407 aa22.32■■□□□ 1.16
CACNA1A-207ENST00000586190 PDE6AP16499 860 aa22.32■■□□□ 1.16
CACNA1A-207ENST00000586190 CERKLQ49MI3 558 aaPredicted RBP22.32■■□□□ 1.16
CACNA1A-207ENST00000586190 SLC9C2Q5TAH2 1124 aa22.32■■□□□ 1.16
CACNA1A-207ENST00000586190 DEFB118Q96PH6 123 aa22.32■■□□□ 1.16
CACNA1A-207ENST00000586190 TXNRD2Q9NNW7 524 aa22.32■■□□□ 1.16
CACNA1A-207ENST00000586190 RBPJLQ9UBG7 517 aa22.32■■□□□ 1.16
CACNA1A-207ENST00000586190 TAOK2Q9UL54 1235 aa22.32■■□□□ 1.16
CACNA1A-207ENST00000586190 COLQQ9Y215 455 aaPredicted RBP22.32■■□□□ 1.16
CACNA1A-207ENST00000586190 COG6Q9Y2V7 657 aa22.32■■□□□ 1.16
CACNA1A-207ENST00000586190 IFIT2P09913 472 aaKnown RBP22.31■■□□□ 1.16
CACNA1A-207ENST00000586190 XRCC5P13010 732 aaKnown RBP22.31■■□□□ 1.16
CACNA1A-207ENST00000586190 USP14P54578 494 aa22.31■■□□□ 1.16
CACNA1A-207ENST00000586190 GABPAQ06546 454 aa22.31■■□□□ 1.16
CACNA1A-207ENST00000586190 TCRBV5S4A2TA0A5A2 114 aa22.3■■□□□ 1.16
CACNA1A-207ENST00000586190 TFRCP02786 760 aaKnown RBP22.3■■□□□ 1.16
CACNA1A-207ENST00000586190 MAPK4P31152 587 aa22.3■■□□□ 1.16
CACNA1A-207ENST00000586190 SHMT1P34896 483 aa22.3■■□□□ 1.16
CACNA1A-207ENST00000586190 PLCD1P51178 756 aa22.3■■□□□ 1.16
CACNA1A-207ENST00000586190 ABCB5Q2M3G0 1257 aa22.3■■□□□ 1.16
CACNA1A-207ENST00000586190 SOCS4Q8WXH5 440 aa22.3■■□□□ 1.16
CACNA1A-207ENST00000586190 CRNKL1Q9BZJ0 848 aaKnown RBP22.3■■□□□ 1.16
CACNA1A-207ENST00000586190 KIAA1683Q9H0B3 1180 aa22.3■■□□□ 1.16
CACNA1A-207ENST00000586190 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.3■■□□□ 1.16
CACNA1A-207ENST00000586190 RPTORQ8N122 1335 aa22.3■■□□□ 1.16
CACNA1A-207ENST00000586190 FXR1P51114 621 aaKnown RBP eCLIP22.29■■□□□ 1.16
CACNA1A-207ENST00000586190 ERVK-9P63128 1117 aa22.29■■□□□ 1.16
CACNA1A-207ENST00000586190 ERVK-24P63145 666 aa22.29■■□□□ 1.16
CACNA1A-207ENST00000586190 ANKLE1Q8NAG6 615 aa22.29■■□□□ 1.16
CACNA1A-207ENST00000586190 NUDT12Q9BQG2 462 aa22.29■■□□□ 1.16
CACNA1A-207ENST00000586190 CABP5Q9NP86 173 aa22.29■■□□□ 1.16
CACNA1A-207ENST00000586190 RCAN3Q9UKA8 241 aa22.29■■□□□ 1.16
CACNA1A-207ENST00000586190 ZNF532Q9HCE3 1301 aa22.29■■□□□ 1.16
CACNA1A-207ENST00000586190 TRIOBPQ9H2D6 2365 aa22.28■■□□□ 1.16
CACNA1A-207ENST00000586190 USP17L15C9J2P7 530 aa22.28■■□□□ 1.16
CACNA1A-207ENST00000586190 USP17L13C9JLJ4 530 aa22.28■■□□□ 1.16
CACNA1A-207ENST00000586190 USP17L11C9JVI0 530 aa22.28■■□□□ 1.16
CACNA1A-207ENST00000586190 USP17L18D6R9N7 530 aa22.28■■□□□ 1.16
CACNA1A-207ENST00000586190 USP17L22D6RA61 530 aa22.28■■□□□ 1.16
CACNA1A-207ENST00000586190 USP17L17D6RBQ6 530 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms