RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-222ENST00000585867 SLC3A2P08195 630 aaKnown RBP21.02■□□□□ 0.95
RBFOX1-222ENST00000585867 PCP11498 1178 aaKnown RBP21.02■□□□□ 0.95
RBFOX1-222ENST00000585867 GABPAQ06546 454 aa21.02■□□□□ 0.95
RBFOX1-222ENST00000585867 USP2O75604 605 aaPredicted RBP21.01■□□□□ 0.95
RBFOX1-222ENST00000585867 MCM5P33992 734 aa21.01■□□□□ 0.95
RBFOX1-222ENST00000585867 FGD1P98174 961 aa21.01■□□□□ 0.95
RBFOX1-222ENST00000585867 TTLL12Q14166 644 aaPredicted RBP21.01■□□□□ 0.95
RBFOX1-222ENST00000585867 ZNF341Q9BYN7 854 aa21.01■□□□□ 0.95
RBFOX1-222ENST00000585867 DNAJC18Q9H819 358 aa21.01■□□□□ 0.95
RBFOX1-222ENST00000585867 CDK8P49336 464 aa21■□□□□ 0.95
RBFOX1-222ENST00000585867 CUL4AQ13619 759 aa21■□□□□ 0.95
RBFOX1-222ENST00000585867 AKNAD1Q5T1N1 836 aa21■□□□□ 0.95
RBFOX1-222ENST00000585867 CST9Q5W186 159 aa21■□□□□ 0.95
RBFOX1-222ENST00000585867 C16orf86Q6ZW13 317 aa21■□□□□ 0.95
RBFOX1-222ENST00000585867 SLC44A5Q8NCS7 719 aa21■□□□□ 0.95
RBFOX1-222ENST00000585867 STAG1Q8WVM7 1258 aa21■□□□□ 0.95
RBFOX1-222ENST00000585867 INTS4Q96HW7 963 aaKnown RBP21■□□□□ 0.95
RBFOX1-222ENST00000585867 KRT23Q9C075 422 aa21■□□□□ 0.95
RBFOX1-222ENST00000585867 SWAP70Q9UH65 585 aa21■□□□□ 0.95
RBFOX1-222ENST00000585867 ANGEL1Q9UNK9 670 aaKnown RBP21■□□□□ 0.95
RBFOX1-222ENST00000585867 EXOSC10Q01780 885 aaKnown RBP20.99■□□□□ 0.95
RBFOX1-222ENST00000585867 MFSD6Q6ZSS7 791 aa20.99■□□□□ 0.95
RBFOX1-222ENST00000585867 NOL8Q76FK4 1167 aaKnown RBP20.99■□□□□ 0.95
RBFOX1-222ENST00000585867 TBC1D10CQ8IV04 446 aa20.99■□□□□ 0.95
RBFOX1-222ENST00000585867 FBXL16Q8N461 479 aa20.99■□□□□ 0.95
RBFOX1-222ENST00000585867 SPRYD3Q8NCJ5 442 aa20.99■□□□□ 0.95
RBFOX1-222ENST00000585867 NBPF3Q9H094 633 aa20.99■□□□□ 0.95
RBFOX1-222ENST00000585867 SLKQ9H2G2 1235 aaPredicted RBP20.99■□□□□ 0.95
RBFOX1-222ENST00000585867 GBA2Q9HCG7 927 aaPredicted RBP20.99■□□□□ 0.95
RBFOX1-222ENST00000585867 CWC22Q9HCG8 908 aaKnown RBP20.99■□□□□ 0.95
RBFOX1-222ENST00000585867 CIZ1Q9ULV3 898 aaPredicted RBP20.99■□□□□ 0.95
RBFOX1-222ENST00000585867 ROBO3Q96MS0 1386 aa20.99■□□□□ 0.95
RBFOX1-222ENST00000585867 TRPM7Q96QT4 1865 aa20.98■□□□□ 0.95
RBFOX1-222ENST00000585867 SHMT1P34896 483 aa20.98■□□□□ 0.95
RBFOX1-222ENST00000585867 PDE4BQ07343 736 aa20.98■□□□□ 0.95
RBFOX1-222ENST00000585867 Q6ZUG5 572 aa20.98■□□□□ 0.95
RBFOX1-222ENST00000585867 MOB2Q70IA6 237 aa20.98■□□□□ 0.95
RBFOX1-222ENST00000585867 ARMC9Q7Z3E5 817 aa20.98■□□□□ 0.95
RBFOX1-222ENST00000585867 MB21D2Q8IYB1 491 aaPredicted RBP20.98■□□□□ 0.95
RBFOX1-222ENST00000585867 C2orf69Q8N8R5 385 aa20.98■□□□□ 0.95
RBFOX1-222ENST00000585867 KLRG1Q96E93 195 aa20.98■□□□□ 0.95
RBFOX1-222ENST00000585867 INCENPQ9NQS7 918 aa20.98■□□□□ 0.95
RBFOX1-222ENST00000585867 TAOK2Q9UL54 1235 aa20.98■□□□□ 0.95
RBFOX1-222ENST00000585867 NT5C2P49902 561 aa20.97■□□□□ 0.95
RBFOX1-222ENST00000585867 TATDN1Q6P1N9 297 aa20.97■□□□□ 0.95
RBFOX1-222ENST00000585867 AGXT2Q9BYV1 514 aa20.97■□□□□ 0.95
RBFOX1-222ENST00000585867 MKNK2Q9HBH9 465 aa20.97■□□□□ 0.95
RBFOX1-222ENST00000585867 ZNF287Q9HBT7 754 aa20.97■□□□□ 0.95
RBFOX1-222ENST00000585867 TACC3Q9Y6A5 838 aa20.97■□□□□ 0.95
RBFOX1-222ENST00000585867 PHF20L1A8MW92 1017 aa20.97■□□□□ 0.95
RBFOX1-222ENST00000585867 IREB2P48200 963 aaKnown RBP20.97■□□□□ 0.95
RBFOX1-222ENST00000585867 TOB2Q14106 344 aaPredicted RBP20.97■□□□□ 0.95
RBFOX1-222ENST00000585867 WRNIP1Q96S55 665 aa20.97■□□□□ 0.95
RBFOX1-222ENST00000585867 CHMP5Q9NZZ3 219 aa20.97■□□□□ 0.95
RBFOX1-222ENST00000585867 ZNF112Q9UJU3 913 aa20.97■□□□□ 0.95
RBFOX1-222ENST00000585867 UBE2Q2LH0YL09 131 aa20.96■□□□□ 0.95
RBFOX1-222ENST00000585867 PRDM1O75626 825 aa20.96■□□□□ 0.95
RBFOX1-222ENST00000585867 FKBP1BP68106 108 aa20.96■□□□□ 0.95
RBFOX1-222ENST00000585867 RRP1BQ14684 758 aaKnown RBP20.96■□□□□ 0.95
RBFOX1-222ENST00000585867 MAP3K11Q16584 847 aa20.96■□□□□ 0.95
RBFOX1-222ENST00000585867 CERKLQ49MI3 558 aaPredicted RBP20.96■□□□□ 0.95
RBFOX1-222ENST00000585867 ZNF444Q8N0Y2 327 aaPredicted RBP20.96■□□□□ 0.95
RBFOX1-222ENST00000585867 TOMM22Q9NS69 142 aa20.96■□□□□ 0.95
RBFOX1-222ENST00000585867 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.96■□□□□ 0.95
RBFOX1-222ENST00000585867 PRC1O43663 620 aa20.95■□□□□ 0.94
RBFOX1-222ENST00000585867 FGRP09769 529 aa20.95■□□□□ 0.94
RBFOX1-222ENST00000585867 INPP5BP32019 993 aa20.95■□□□□ 0.94
RBFOX1-222ENST00000585867 MAP3K9P80192 1104 aa20.95■□□□□ 0.94
RBFOX1-222ENST00000585867 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.95■□□□□ 0.94
RBFOX1-222ENST00000585867 CHMP4CQ96CF2 233 aa20.95■□□□□ 0.94
RBFOX1-222ENST00000585867 TCEANC2Q96MN5 208 aa20.95■□□□□ 0.94
RBFOX1-222ENST00000585867 MTA3Q9BTC8 594 aa20.95■□□□□ 0.94
RBFOX1-222ENST00000585867 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.95■□□□□ 0.94
RBFOX1-222ENST00000585867 NEDD4P46934 1319 aa20.95■□□□□ 0.94
RBFOX1-222ENST00000585867 RASA1P20936 1047 aa20.94■□□□□ 0.94
RBFOX1-222ENST00000585867 CAP2P40123 477 aa20.94■□□□□ 0.94
RBFOX1-222ENST00000585867 RRP12Q5JTH9 1297 aaKnown RBP20.94■□□□□ 0.94
RBFOX1-222ENST00000585867 ZKSCAN4Q969J2 545 aaPredicted RBP20.94■□□□□ 0.94
RBFOX1-222ENST00000585867 TMEM87BQ96K49 555 aa20.94■□□□□ 0.94
RBFOX1-222ENST00000585867 TPCN1Q9ULQ1 816 aa20.94■□□□□ 0.94
RBFOX1-222ENST00000585867 ORC4O43929 436 aa20.93■□□□□ 0.94
RBFOX1-222ENST00000585867 CTNND1O60716 968 aaKnown RBP20.93■□□□□ 0.94
RBFOX1-222ENST00000585867 GDF11O95390 407 aa20.93■□□□□ 0.94
RBFOX1-222ENST00000585867 DDIT3P35638 169 aa20.93■□□□□ 0.94
RBFOX1-222ENST00000585867 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.93■□□□□ 0.94
RBFOX1-222ENST00000585867 BRF1Q92994 677 aa20.93■□□□□ 0.94
RBFOX1-222ENST00000585867 CCDC17Q96LX7 622 aa20.93■□□□□ 0.94
RBFOX1-222ENST00000585867 FOXD4L1Q9NU39 408 aa20.93■□□□□ 0.94
RBFOX1-222ENST00000585867 PAPPA2Q9BXP8 1791 aa20.93■□□□□ 0.94
RBFOX1-222ENST00000585867 TMEM88BA6NKF7 163 aa20.93■□□□□ 0.94
RBFOX1-222ENST00000585867 B4E1Z4 1266 aa20.93■□□□□ 0.94
RBFOX1-222ENST00000585867 SART3Q15020 963 aaKnown RBP20.93■□□□□ 0.94
RBFOX1-222ENST00000585867 LDLRAD1Q5T700 205 aa20.93■□□□□ 0.94
RBFOX1-222ENST00000585867 ANKRD13AQ8IZ07 590 aa20.93■□□□□ 0.94
RBFOX1-222ENST00000585867 ESR2Q92731 530 aa20.93■□□□□ 0.94
RBFOX1-222ENST00000585867 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.93■□□□□ 0.94
RBFOX1-222ENST00000585867 MYH8P13535 1937 aa20.92■□□□□ 0.94
RBFOX1-222ENST00000585867 RANBP6O60518 1105 aaKnown RBP20.92■□□□□ 0.94
RBFOX1-222ENST00000585867 AKR1B1P15121 316 aa20.92■□□□□ 0.94
RBFOX1-222ENST00000585867 COL9A3Q14050 684 aaPredicted RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms