RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	MORF4L1	Q9UBU8	362 aa		20	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	NDUFB9	Q9Y6M9	179 aa		20	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	USP17L10	C9JJH3	530 aa		19.99	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	IDH1	O75874	414 aa	Known RBP	19.99	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	GDF11	O95390	407 aa		19.99	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	CAPN2	P17655	700 aa		19.99	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	TRIM34	Q9BYJ4	488 aa		19.99	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	ANTXR1	Q9H6X2	564 aa		19.99	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	PHIP	Q8WWQ0	1821 aa		19.98	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	IRX3	P78415	501 aa	Predicted RBP	19.98	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	MIGA1	Q8NAN2	632 aa		19.98	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	TXNRD2	Q9NNW7	524 aa		19.98	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	RBM27	Q9P2N5	1060 aa	Known RBP	19.98	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	RBPJL	Q9UBG7	517 aa		19.98	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	ZBTB21	Q9ULJ3	1066 aa		19.98	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	NR2E3	Q9Y5X4	410 aa		19.98	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	DOCK1	Q14185	1865 aa		19.97	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	HLA-DOA	P06340	250 aa		19.97	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	TRIM32	Q13049	653 aa		19.97	■□□□□ 0.79
PRKAR1A-206	ENST00000585460		Q3C1V9	767 aa		19.97	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	MAGEB6	Q8N7X4	407 aa		19.97	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	PANK1	Q8TE04	598 aa		19.97	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	EMILIN3	Q9NT22	766 aa		19.97	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	EXOC6B	Q9Y2D4	811 aa		19.97	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	HERVK_113	P62684	666 aa		19.96	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	TATDN1	Q6P1N9	297 aa		19.96	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	POTEE	Q6S8J3	1075 aa		19.96	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	GPRC5A	Q8NFJ5	357 aa		19.96	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	19.96	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	PRO3102	Q9H379	93 aa		19.96	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	GH2	P01242	217 aa		19.95	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	HMGCR	P04035	888 aa		19.95	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	USP5	P45974	858 aa		19.95	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	AACS	Q86V21	672 aa		19.95	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	PAWR	Q96IZ0	340 aa	Known RBP	19.95	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	CYP2B6	P20813	491 aa		19.94	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	MAP3K12	Q12852	859 aa		19.94	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	USP17L2	Q6R6M4	530 aa		19.94	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	CERS3	Q8IU89	383 aa		19.94	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	ERC1	Q8IUD2	1116 aa		19.94	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	TRIOBP	Q9H2D6	2365 aa		19.94	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	RPTOR	Q8N122	1335 aa		19.94	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	EVI5	O60447	810 aa		19.93	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	DIS3L	Q8TF46	1054 aa	Known RBP	19.93	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	TRIB2	Q92519	343 aa		19.93	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	HMX1	Q9NP08	348 aa	Predicted RBP	19.93	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	SERPINB13	Q9UIV8	391 aa		19.93	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	PTPRF	P10586	1907 aa		19.93	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	PLCD1	P51178	756 aa		19.92	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	TMED8	Q6PL24	325 aa	Predicted RBP	19.92	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	NECAB2	Q7Z6G3	386 aa		19.92	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	TTC6	Q86TZ1	520 aa		19.92	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	RHPN1	Q8TCX5	695 aa		19.92	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	USP6NL	Q92738	828 aa		19.92	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	NUDT12	Q9BQG2	462 aa		19.92	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	RIOK1	Q9BRS2	568 aa	Known RBP	19.92	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	EHD4	Q9H223	541 aa		19.92	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	IL1RAPL2	Q9NP60	686 aa		19.92	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	MGAM	O43451	1857 aa		19.91	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	XRCC5	P13010	732 aa	Known RBP	19.91	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	MNX1	P50219	401 aa	Predicted RBP	19.91	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	ERVK-9	P63128	1117 aa		19.91	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	ERVK-24	P63145	666 aa		19.91	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	CERKL	Q49MI3	558 aa	Predicted RBP	19.91	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	MAP3K21	Q5TCX8	1036 aa		19.91	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	PORCN	Q9H237	461 aa		19.91	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	MAPK4	P31152	587 aa		19.9	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	HSP90AB4P	Q58FF6	505 aa		19.9	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	ANKLE1	Q8NAG6	615 aa		19.9	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	ACER1	Q8TDN7	264 aa		19.9	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	C12orf42	Q96LP6	360 aa		19.9	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	DOCK3	Q8IZD9	2030 aa		19.9	■□□□□ 0.78
PRKAR1A-206	ENST00000585460	USP17L15	C9J2P7	530 aa		19.89	■□□□□ 0.77
PRKAR1A-206	ENST00000585460	USP17L13	C9JLJ4	530 aa		19.89	■□□□□ 0.77
PRKAR1A-206	ENST00000585460	USP17L11	C9JVI0	530 aa		19.89	■□□□□ 0.77
PRKAR1A-206	ENST00000585460	USP17L18	D6R9N7	530 aa		19.89	■□□□□ 0.77
PRKAR1A-206	ENST00000585460	USP17L22	D6RA61	530 aa		19.89	■□□□□ 0.77
PRKAR1A-206	ENST00000585460	USP17L17	D6RBQ6	530 aa		19.89	■□□□□ 0.77
PRKAR1A-206	ENST00000585460	USP17L19	D6RCP7	530 aa		19.89	■□□□□ 0.77
PRKAR1A-206	ENST00000585460	USP17L20	D6RJB6	530 aa		19.89	■□□□□ 0.77
PRKAR1A-206	ENST00000585460	SHMT1	P34896	483 aa		19.89	■□□□□ 0.77
PRKAR1A-206	ENST00000585460	USP17L24	Q0WX57	530 aa		19.89	■□□□□ 0.77
PRKAR1A-206	ENST00000585460	RAB3GAP1	Q15042	981 aa		19.89	■□□□□ 0.77
PRKAR1A-206	ENST00000585460	ZYX	Q15942	572 aa	Known RBP	19.89	■□□□□ 0.77
PRKAR1A-206	ENST00000585460	ABCB5	Q2M3G0	1257 aa		19.89	■□□□□ 0.77
PRKAR1A-206	ENST00000585460	MORN1	Q5T089	497 aa		19.89	■□□□□ 0.77
PRKAR1A-206	ENST00000585460	DIEXF	Q68CQ4	756 aa	Known RBP	19.89	■□□□□ 0.77
PRKAR1A-206	ENST00000585460	CATSPERG	Q6ZRH7	1159 aa		19.89	■□□□□ 0.77
PRKAR1A-206	ENST00000585460	SIRT2	Q8IXJ6	389 aa		19.89	■□□□□ 0.77
PRKAR1A-206	ENST00000585460	GTF3C2	Q8WUA4	911 aa	Predicted RBP	19.89	■□□□□ 0.77
PRKAR1A-206	ENST00000585460	PAGR1	Q9BTK6	254 aa		19.89	■□□□□ 0.77
PRKAR1A-206	ENST00000585460	STAP2	Q9UGK3	403 aa		19.89	■□□□□ 0.77
PRKAR1A-206	ENST00000585460	OGDHL	Q9ULD0	1010 aa		19.89	■□□□□ 0.77
PRKAR1A-206	ENST00000585460	SIPA1L1	O43166	1804 aa		19.88	■□□□□ 0.77
PRKAR1A-206	ENST00000585460	MAGEB6P1	A0A0J9YX57	407 aa		19.88	■□□□□ 0.77
PRKAR1A-206	ENST00000585460	CNMD	O75829	334 aa		19.88	■□□□□ 0.77
PRKAR1A-206	ENST00000585460	GUCY1A2	P33402	732 aa		19.88	■□□□□ 0.77
PRKAR1A-206	ENST00000585460	TTF1	Q15361	905 aa	Predicted RBP	19.88	■□□□□ 0.77
PRKAR1A-206	ENST00000585460	SLC9C2	Q5TAH2	1124 aa		19.88	■□□□□ 0.77
PRKAR1A-206	ENST00000585460	GPR142	Q7Z601	462 aa		19.88	■□□□□ 0.77

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms