RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 DIS3LQ8TF46 1054 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-226ENST00000585026 GPR108Q9NPR9 543 aa13.13□□□□□ -0.31
CSNK1D-226ENST00000585026 AATFQ9NY61 560 aaKnown RBP eCLIP13.13□□□□□ -0.31
CSNK1D-226ENST00000585026 OGDHLQ9ULD0 1010 aa13.13□□□□□ -0.31
CSNK1D-226ENST00000585026 ZMYND8Q9ULU4 1186 aaPredicted RBP13.13□□□□□ -0.31
CSNK1D-226ENST00000585026 DLL1O00548 723 aa13.12□□□□□ -0.31
CSNK1D-226ENST00000585026 GLRX3O76003 335 aaKnown RBP13.12□□□□□ -0.31
CSNK1D-226ENST00000585026 NEFLP07196 543 aa13.12□□□□□ -0.31
CSNK1D-226ENST00000585026 PRKAR2AP13861 404 aaKnown RBP13.12□□□□□ -0.31
CSNK1D-226ENST00000585026 ZKSCAN1P17029 563 aaPredicted RBP13.12□□□□□ -0.31
CSNK1D-226ENST00000585026 RGS2P41220 211 aa13.12□□□□□ -0.31
CSNK1D-226ENST00000585026 OS9Q13438 667 aaPredicted RBP13.12□□□□□ -0.31
CSNK1D-226ENST00000585026 CERS3Q8IU89 383 aa13.12□□□□□ -0.31
CSNK1D-226ENST00000585026 MAPKAPK5Q8IW41 473 aa13.12□□□□□ -0.31
CSNK1D-226ENST00000585026 TGFBRAP1Q8WUH2 860 aa13.12□□□□□ -0.31
CSNK1D-226ENST00000585026 TRIB2Q92519 343 aa13.12□□□□□ -0.31
CSNK1D-226ENST00000585026 P2RX7Q99572 595 aaKnown RBP13.12□□□□□ -0.31
CSNK1D-226ENST00000585026 SOX1O00570 391 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-226ENST00000585026 RRP1P56182 461 aaKnown RBP13.11□□□□□ -0.31
CSNK1D-226ENST00000585026 CCNA1P78396 465 aa13.11□□□□□ -0.31
CSNK1D-226ENST00000585026 RRP1BQ14684 758 aaKnown RBP13.11□□□□□ -0.31
CSNK1D-226ENST00000585026 MAP3K21Q5TCX8 1036 aa13.11□□□□□ -0.31
CSNK1D-226ENST00000585026 USP17L2Q6R6M4 530 aa13.11□□□□□ -0.31
CSNK1D-226ENST00000585026 METTL16Q86W50 562 aaKnown RBP13.11□□□□□ -0.31
CSNK1D-226ENST00000585026 LRCH3Q96II8 777 aa13.11□□□□□ -0.31
CSNK1D-226ENST00000585026 ERVK-9P63128 1117 aa13.1□□□□□ -0.31
CSNK1D-226ENST00000585026 ERVK-24P63145 666 aa13.1□□□□□ -0.31
CSNK1D-226ENST00000585026 TRIM32Q13049 653 aa13.1□□□□□ -0.31
CSNK1D-226ENST00000585026 LRIT3Q3SXY7 679 aa13.1□□□□□ -0.31
CSNK1D-226ENST00000585026 PLEKHH3Q7Z736 793 aa13.1□□□□□ -0.31
CSNK1D-226ENST00000585026 TDHQ8IZJ6 230 aa13.1□□□□□ -0.31
CSNK1D-226ENST00000585026 FRAT1Q92837 279 aaPredicted RBP13.1□□□□□ -0.31
CSNK1D-226ENST00000585026 ZNF512BQ96KM6 892 aaPredicted RBP13.1□□□□□ -0.31
CSNK1D-226ENST00000585026 UBE2OQ9C0C9 1292 aaKnown RBP13.1□□□□□ -0.31
CSNK1D-226ENST00000585026 SNRKQ9NRH2 765 aa13.1□□□□□ -0.31
CSNK1D-226ENST00000585026 ZBTB21Q9ULJ3 1066 aa13.1□□□□□ -0.31
CSNK1D-226ENST00000585026 FLT1P17948 1338 aa13.1□□□□□ -0.31
CSNK1D-226ENST00000585026 PTPRFP10586 1907 aa13.09□□□□□ -0.31
CSNK1D-226ENST00000585026 PNMA6EA0A0J9YXQ4 647 aa13.09□□□□□ -0.31
CSNK1D-226ENST00000585026 TRIM27P14373 513 aa13.09□□□□□ -0.31
CSNK1D-226ENST00000585026 MAGEA10P43363 369 aaPredicted RBP13.09□□□□□ -0.31
CSNK1D-226ENST00000585026 USP14P54578 494 aa13.09□□□□□ -0.31
CSNK1D-226ENST00000585026 TNNI3KQ59H18 835 aa13.09□□□□□ -0.31
CSNK1D-226ENST00000585026 MFSD14CQ5VZR4 134 aa13.09□□□□□ -0.31
CSNK1D-226ENST00000585026 TMED8Q6PL24 325 aaPredicted RBP13.09□□□□□ -0.31
CSNK1D-226ENST00000585026 GPR142Q7Z601 462 aa13.09□□□□□ -0.31
CSNK1D-226ENST00000585026 DEFB123Q8N688 67 aa13.09□□□□□ -0.31
CSNK1D-226ENST00000585026 FEZ1Q99689 392 aa13.09□□□□□ -0.31
CSNK1D-226ENST00000585026 APBA2Q99767 749 aa13.09□□□□□ -0.31
CSNK1D-226ENST00000585026 PAGR1Q9BTK6 254 aa13.09□□□□□ -0.31
CSNK1D-226ENST00000585026 RBPJLQ9UBG7 517 aa13.09□□□□□ -0.31
CSNK1D-226ENST00000585026 PALD1Q9ULE6 856 aa13.09□□□□□ -0.31
CSNK1D-226ENST00000585026 RABGAP1Q9Y3P9 1069 aa13.09□□□□□ -0.31
CSNK1D-226ENST00000585026 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.09□□□□□ -0.31
CSNK1D-226ENST00000585026 FPGT-TNNI3KV9GXZ4 949 aa13.09□□□□□ -0.31
CSNK1D-226ENST00000585026 PHIPQ8WWQ0 1821 aa13.09□□□□□ -0.31
CSNK1D-226ENST00000585026 USP17L15C9J2P7 530 aa13.08□□□□□ -0.32
CSNK1D-226ENST00000585026 USP17L13C9JLJ4 530 aa13.08□□□□□ -0.32
CSNK1D-226ENST00000585026 USP17L11C9JVI0 530 aa13.08□□□□□ -0.32
CSNK1D-226ENST00000585026 USP17L18D6R9N7 530 aa13.08□□□□□ -0.32
CSNK1D-226ENST00000585026 USP17L22D6RA61 530 aa13.08□□□□□ -0.32
CSNK1D-226ENST00000585026 USP17L17D6RBQ6 530 aa13.08□□□□□ -0.32
CSNK1D-226ENST00000585026 USP17L19D6RCP7 530 aa13.08□□□□□ -0.32
CSNK1D-226ENST00000585026 USP17L20D6RJB6 530 aa13.08□□□□□ -0.32
CSNK1D-226ENST00000585026 BCAR3O75815 825 aa13.08□□□□□ -0.32
CSNK1D-226ENST00000585026 GDF11O95390 407 aa13.08□□□□□ -0.32
CSNK1D-226ENST00000585026 SYN1P17600 705 aa13.08□□□□□ -0.32
CSNK1D-226ENST00000585026 CYP7A1P22680 504 aa13.08□□□□□ -0.32
CSNK1D-226ENST00000585026 CACNB2Q08289 660 aaPredicted RBP13.08□□□□□ -0.32
CSNK1D-226ENST00000585026 USP17L24Q0WX57 530 aa13.08□□□□□ -0.32
CSNK1D-226ENST00000585026 TTC6Q86TZ1 520 aa13.08□□□□□ -0.32
CSNK1D-226ENST00000585026 DBNDD2Q9BQY9 259 aa13.08□□□□□ -0.32
CSNK1D-226ENST00000585026 TXNRD2Q9NNW7 524 aa13.08□□□□□ -0.32
CSNK1D-226ENST00000585026 IVNS1ABPQ9Y6Y0 642 aa13.08□□□□□ -0.32
CSNK1D-226ENST00000585026 LOC285556D6RIA3 1793 aa13.07□□□□□ -0.32
CSNK1D-226ENST00000585026 MSCO60682 206 aa13.07□□□□□ -0.32
CSNK1D-226ENST00000585026 SURF6O75683 361 aaKnown RBP13.07□□□□□ -0.32
CSNK1D-226ENST00000585026 CYP2E1P05181 493 aaPredicted RBP13.07□□□□□ -0.32
CSNK1D-226ENST00000585026 USP5P45974 858 aa13.07□□□□□ -0.32
CSNK1D-226ENST00000585026 MNX1P50219 401 aaPredicted RBP13.07□□□□□ -0.32
CSNK1D-226ENST00000585026 MAP2K5Q13163 448 aa13.07□□□□□ -0.32
CSNK1D-226ENST00000585026 MORN1Q5T089 497 aa13.07□□□□□ -0.32
CSNK1D-226ENST00000585026 USP6NLQ92738 828 aa13.07□□□□□ -0.32
CSNK1D-226ENST00000585026 EDC3Q96F86 508 aaKnown RBP13.07□□□□□ -0.32
CSNK1D-226ENST00000585026 C12orf42Q96LP6 360 aa13.07□□□□□ -0.32
CSNK1D-226ENST00000585026 DNAJC18Q9H819 358 aa13.07□□□□□ -0.32
CSNK1D-226ENST00000585026 CABP5Q9NP86 173 aa13.07□□□□□ -0.32
CSNK1D-226ENST00000585026 SAP30BPQ9UHR5 308 aaKnown RBP13.07□□□□□ -0.32
CSNK1D-226ENST00000585026 DOCK3Q8IZD9 2030 aa13.06□□□□□ -0.32
CSNK1D-226ENST00000585026 RANBP2P49792 3224 aaKnown RBP13.06□□□□□ -0.32
CSNK1D-226ENST00000585026 GH2P01242 217 aa13.06□□□□□ -0.32
CSNK1D-226ENST00000585026 COL6A1P12109 1028 aa13.06□□□□□ -0.32
CSNK1D-226ENST00000585026 ZAP70P43403 619 aa13.06□□□□□ -0.32
CSNK1D-226ENST00000585026 ATP8B2P98198 1209 aa13.06□□□□□ -0.32
CSNK1D-226ENST00000585026 POLA2Q14181 598 aa13.06□□□□□ -0.32
CSNK1D-226ENST00000585026 Q3C1V9 767 aa13.06□□□□□ -0.32
CSNK1D-226ENST00000585026 WDR78Q5VTH9 848 aa13.06□□□□□ -0.32
CSNK1D-226ENST00000585026 ZKSCAN2Q63HK3 967 aa13.06□□□□□ -0.32
CSNK1D-226ENST00000585026 CLUAP1Q96AJ1 413 aa13.06□□□□□ -0.32
CSNK1D-226ENST00000585026 PORCNQ9H237 461 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms