RNA–Protein interactions for RNA: ENST00000584913.1

CSNK1D-225, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 295 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-225ENST00000584913 CCDC85CA6NKD9 419 aa20.2■□□□□ 0.82
CSNK1D-225ENST00000584913 PI4K2BQ8TCG2 481 aa20.2■□□□□ 0.82
CSNK1D-225ENST00000584913 DDRGK1Q96HY6 314 aa20.2■□□□□ 0.82
CSNK1D-225ENST00000584913 PTPN22Q9Y2R2 807 aa20.2■□□□□ 0.82
CSNK1D-225ENST00000584913 MBD4O95243 580 aa20.19■□□□□ 0.82
CSNK1D-225ENST00000584913 POLR3DP05423 398 aaPredicted RBP20.19■□□□□ 0.82
CSNK1D-225ENST00000584913 BCRP11274 1271 aa20.19■□□□□ 0.82
CSNK1D-225ENST00000584913 MX1P20591 662 aa20.19■□□□□ 0.82
CSNK1D-225ENST00000584913 BACE1P56817 501 aa20.19■□□□□ 0.82
CSNK1D-225ENST00000584913 SPP2Q13103 211 aa20.19■□□□□ 0.82
CSNK1D-225ENST00000584913 GIMAP6Q6P9H5 292 aa20.19■□□□□ 0.82
CSNK1D-225ENST00000584913 GADL1Q6ZQY3 521 aa20.19■□□□□ 0.82
CSNK1D-225ENST00000584913 AMOTL1Q8IY63 956 aa20.19■□□□□ 0.82
CSNK1D-225ENST00000584913 APPBP2Q92624 585 aa20.19■□□□□ 0.82
CSNK1D-225ENST00000584913 MCM9Q9NXL9 1143 aa20.19■□□□□ 0.82
CSNK1D-225ENST00000584913 RWDD1Q9H446 243 aaPredicted RBP20.18■□□□□ 0.82
CSNK1D-225ENST00000584913 ARMT1Q9H993 441 aa20.18■□□□□ 0.82
CSNK1D-225ENST00000584913 STAP2Q9UGK3 403 aa20.18■□□□□ 0.82
CSNK1D-225ENST00000584913 HOXA7P31268 230 aaPredicted RBP20.17■□□□□ 0.82
CSNK1D-225ENST00000584913 SMC5Q8IY18 1101 aa20.17■□□□□ 0.82
CSNK1D-225ENST00000584913 SDR42E1Q8WUS8 393 aa20.17■□□□□ 0.82
CSNK1D-225ENST00000584913 C12orf42Q96LP6 360 aa20.17■□□□□ 0.82
CSNK1D-225ENST00000584913 USP17L10C9JJH3 530 aa20.16■□□□□ 0.82
CSNK1D-225ENST00000584913 RNF113AO15541 343 aaKnown RBP20.16■□□□□ 0.82
CSNK1D-225ENST00000584913 GNAT2P19087 354 aa20.16■□□□□ 0.82
CSNK1D-225ENST00000584913 SHMT1P34896 483 aa20.16■□□□□ 0.82
CSNK1D-225ENST00000584913 GCLCP48506 637 aaPredicted RBP20.16■□□□□ 0.82
CSNK1D-225ENST00000584913 PLCD1P51178 756 aa20.16■□□□□ 0.82
CSNK1D-225ENST00000584913 CERKLQ49MI3 558 aaPredicted RBP20.16■□□□□ 0.82
CSNK1D-225ENST00000584913 ARMC5Q96C12 935 aa20.16■□□□□ 0.82
CSNK1D-225ENST00000584913 BCL11AQ9H165 835 aa20.16■□□□□ 0.82
CSNK1D-225ENST00000584913 CABP5Q9NP86 173 aa20.16■□□□□ 0.82
CSNK1D-225ENST00000584913 TMOD4Q9NZQ9 345 aa20.16■□□□□ 0.82
CSNK1D-225ENST00000584913 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.16■□□□□ 0.82
CSNK1D-225ENST00000584913 ARPP21Q9UBL0 812 aaPredicted RBP20.16■□□□□ 0.82
CSNK1D-225ENST00000584913 GDF11O95390 407 aa20.15■□□□□ 0.82
CSNK1D-225ENST00000584913 HOXD10P28358 340 aa20.15■□□□□ 0.82
CSNK1D-225ENST00000584913 USP14P54578 494 aa20.15■□□□□ 0.82
CSNK1D-225ENST00000584913 HMGCS2P54868 508 aa20.15■□□□□ 0.82
CSNK1D-225ENST00000584913 FAM110CQ1W6H9 321 aa20.15■□□□□ 0.82
CSNK1D-225ENST00000584913 ABCB5Q2M3G0 1257 aa20.15■□□□□ 0.82
CSNK1D-225ENST00000584913 SMCR8Q8TEV9 937 aaPredicted RBP20.15■□□□□ 0.82
CSNK1D-225ENST00000584913 GTF3C2Q8WUA4 911 aaPredicted RBP20.15■□□□□ 0.82
CSNK1D-225ENST00000584913 PUS7LQ9H0K6 701 aaKnown RBP20.15■□□□□ 0.82
CSNK1D-225ENST00000584913 CPA4Q9UI42 421 aa20.15■□□□□ 0.82
CSNK1D-225ENST00000584913 RBBP6Q7Z6E9 1792 aaKnown RBP20.15■□□□□ 0.82
CSNK1D-225ENST00000584913 GH2P01242 217 aa20.14■□□□□ 0.81
CSNK1D-225ENST00000584913 CYP2C8P10632 490 aa20.14■□□□□ 0.81
CSNK1D-225ENST00000584913 OSBPP22059 807 aa20.14■□□□□ 0.81
CSNK1D-225ENST00000584913 JAG1P78504 1218 aa20.14■□□□□ 0.81
CSNK1D-225ENST00000584913 MTMR2Q13614 643 aa20.14■□□□□ 0.81
CSNK1D-225ENST00000584913 ANKRD45Q5TZF3 282 aa20.14■□□□□ 0.81
CSNK1D-225ENST00000584913 C12orf60Q5U649 245 aa20.14■□□□□ 0.81
CSNK1D-225ENST00000584913 CCDC84Q86UT8 332 aaPredicted RBP20.14■□□□□ 0.81
CSNK1D-225ENST00000584913 CCDC17Q96LX7 622 aa20.14■□□□□ 0.81
CSNK1D-225ENST00000584913 STRBPQ96SI9 672 aaKnown RBP20.14■□□□□ 0.81
CSNK1D-225ENST00000584913 KIAA1683Q9H0B3 1180 aa20.14■□□□□ 0.81
CSNK1D-225ENST00000584913 ROBO3Q96MS0 1386 aa20.13■□□□□ 0.81
CSNK1D-225ENST00000584913 HTTP42858 3142 aa20.13■□□□□ 0.81
CSNK1D-225ENST00000584913 SBK1Q52WX2 424 aa20.13■□□□□ 0.81
CSNK1D-225ENST00000584913 TREML2Q5T2D2 321 aa20.13■□□□□ 0.81
CSNK1D-225ENST00000584913 USP17L2Q6R6M4 530 aa20.13■□□□□ 0.81
CSNK1D-225ENST00000584913 SLC4A4Q9Y6R1 1079 aa20.13■□□□□ 0.81
CSNK1D-225ENST00000584913 FCGRTP55899 365 aa20.12■□□□□ 0.81
CSNK1D-225ENST00000584913 CAP1Q01518 475 aa20.12■□□□□ 0.81
CSNK1D-225ENST00000584913 TSHZ3Q63HK5 1081 aa20.12■□□□□ 0.81
CSNK1D-225ENST00000584913 TMEM179Q6ZVK1 233 aa20.12■□□□□ 0.81
CSNK1D-225ENST00000584913 C16orf86Q6ZW13 317 aa20.12■□□□□ 0.81
CSNK1D-225ENST00000584913 OSBP2Q969R2 916 aa20.12■□□□□ 0.81
CSNK1D-225ENST00000584913 SRRDQ9UH36 339 aa20.12■□□□□ 0.81
CSNK1D-225ENST00000584913 PRKAB2O43741 272 aa20.11■□□□□ 0.81
CSNK1D-225ENST00000584913 PSMC4P43686 418 aa20.11■□□□□ 0.81
CSNK1D-225ENST00000584913 PDE1AP54750 535 aa20.11■□□□□ 0.81
CSNK1D-225ENST00000584913 NBPF11Q86T75 865 aa20.11■□□□□ 0.81
CSNK1D-225ENST00000584913 OTUD7AQ8TE49 926 aaPredicted RBP20.11■□□□□ 0.81
CSNK1D-225ENST00000584913 EVI5LQ96CN4 794 aa20.11■□□□□ 0.81
CSNK1D-225ENST00000584913 TRIM47Q96LD4 638 aa20.11■□□□□ 0.81
CSNK1D-225ENST00000584913 MORF4L1Q9UBU8 362 aa20.11■□□□□ 0.81
CSNK1D-225ENST00000584913 MYH8P13535 1937 aa20.1■□□□□ 0.81
CSNK1D-225ENST00000584913 GPAA1O43292 621 aa20.1■□□□□ 0.81
CSNK1D-225ENST00000584913 SLC4A8Q2Y0W8 1093 aa20.1■□□□□ 0.81
CSNK1D-225ENST00000584913 EXOC6Q8TAG9 804 aa20.1■□□□□ 0.81
CSNK1D-225ENST00000584913 ASCC2Q9H1I8 757 aaPredicted RBP20.1■□□□□ 0.81
CSNK1D-225ENST00000584913 BAZ2AQ9UIF9 1905 aaKnown RBP20.1■□□□□ 0.81
CSNK1D-225ENST00000584913 MGAMO43451 1857 aa20.09■□□□□ 0.81
CSNK1D-225ENST00000584913 GSG1L2A8MUP6 293 aa20.09■□□□□ 0.81
CSNK1D-225ENST00000584913 USP17L12C9JPN9 530 aa20.09■□□□□ 0.81
CSNK1D-225ENST00000584913 USP17L21D6R901 530 aa20.09■□□□□ 0.81
CSNK1D-225ENST00000584913 IRX3P78415 501 aaPredicted RBP20.09■□□□□ 0.81
CSNK1D-225ENST00000584913 SLFNL1Q499Z3 407 aa20.09■□□□□ 0.81
CSNK1D-225ENST00000584913 ZMYM1Q5SVZ6 1142 aa20.09■□□□□ 0.81
CSNK1D-225ENST00000584913 CTR9Q6PD62 1173 aa20.09■□□□□ 0.81
CSNK1D-225ENST00000584913 FSD1Q9BTV5 496 aa20.09■□□□□ 0.81
CSNK1D-225ENST00000584913 ARHGAP39Q9C0H5 1083 aa20.09■□□□□ 0.81
CSNK1D-225ENST00000584913 OSBPL3Q9H4L5 887 aa20.09■□□□□ 0.81
CSNK1D-225ENST00000584913 EMILIN3Q9NT22 766 aa20.09■□□□□ 0.81
CSNK1D-225ENST00000584913 SUPT16HQ9Y5B9 1047 aaKnown RBP20.09■□□□□ 0.81
CSNK1D-225ENST00000584913 PTCH2Q9Y6C5 1203 aa20.09■□□□□ 0.81
CSNK1D-225ENST00000584913 FMNL1O95466 1100 aaPredicted RBP20.08■□□□□ 0.81
CSNK1D-225ENST00000584913 CHGBP05060 677 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms