RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 ZNF396Q96N95 335 aaPredicted RBP11.87□□□□□ -0.51
RFFL-212ENST00000584655 ZSCAN10Q96SZ4 725 aaPredicted RBP11.87□□□□□ -0.51
RFFL-212ENST00000584655 ZHX3Q9H4I2 956 aa11.87□□□□□ -0.51
RFFL-212ENST00000584655 DISP2A7MBM2 1401 aa11.87□□□□□ -0.51
RFFL-212ENST00000584655 XDHP47989 1333 aa11.87□□□□□ -0.51
RFFL-212ENST00000584655 AFDNP55196 1824 aaKnown RBP11.87□□□□□ -0.51
RFFL-212ENST00000584655 H0YIN7 160 aa11.87□□□□□ -0.51
RFFL-212ENST00000584655 SORBS3O60504 671 aa11.87□□□□□ -0.51
RFFL-212ENST00000584655 BAG3O95817 575 aa11.87□□□□□ -0.51
RFFL-212ENST00000584655 TM4SF1P30408 202 aa11.87□□□□□ -0.51
RFFL-212ENST00000584655 EARS2Q5JPH6 523 aaKnown RBP11.87□□□□□ -0.51
RFFL-212ENST00000584655 MYSM1Q5VVJ2 828 aa11.87□□□□□ -0.51
RFFL-212ENST00000584655 IGDCC4Q8TDY8 1250 aa11.87□□□□□ -0.51
RFFL-212ENST00000584655 CPLX3Q8WVH0 158 aa11.87□□□□□ -0.51
RFFL-212ENST00000584655 KRT23Q9C075 422 aa11.87□□□□□ -0.51
RFFL-212ENST00000584655 BLZF1Q9H2G9 400 aa11.87□□□□□ -0.51
RFFL-212ENST00000584655 PKD2L1Q9P0L9 805 aa11.87□□□□□ -0.51
RFFL-212ENST00000584655 MYH14Q7Z406 1995 aaKnown RBP11.86□□□□□ -0.51
RFFL-212ENST00000584655 USH1GQ495M9 461 aa11.86□□□□□ -0.51
RFFL-212ENST00000584655 LRRC37A3O60309 1634 aa11.86□□□□□ -0.51
RFFL-212ENST00000584655 R3HDM1Q15032 1099 aaKnown RBP11.86□□□□□ -0.51
RFFL-212ENST00000584655 C11orf57Q6ZUT1 292 aaPredicted RBP11.86□□□□□ -0.51
RFFL-212ENST00000584655 COA7Q96BR5 231 aa11.86□□□□□ -0.51
RFFL-212ENST00000584655 PHLPP1O60346 1717 aa11.86□□□□□ -0.51
RFFL-212ENST00000584655 SCN11AQ9UI33 1791 aa11.86□□□□□ -0.51
RFFL-212ENST00000584655 FSD2A1L4K1 749 aa11.86□□□□□ -0.51
RFFL-212ENST00000584655 UBXN2AP68543 259 aa11.86□□□□□ -0.51
RFFL-212ENST00000584655 DLK2Q6UY11 383 aa11.86□□□□□ -0.51
RFFL-212ENST00000584655 LARGE2Q8N3Y3 721 aa11.86□□□□□ -0.51
RFFL-212ENST00000584655 SLC3A2P08195 630 aaKnown RBP11.85□□□□□ -0.51
RFFL-212ENST00000584655 PNMA1Q8ND90 353 aa11.85□□□□□ -0.51
RFFL-212ENST00000584655 RNF41Q9H4P4 317 aaPredicted RBP11.85□□□□□ -0.51
RFFL-212ENST00000584655 WNT7AO00755 349 aa11.85□□□□□ -0.51
RFFL-212ENST00000584655 POLR2DO15514 142 aaKnown RBP11.85□□□□□ -0.51
RFFL-212ENST00000584655 NOC3LQ8WTT2 800 aaKnown RBP11.85□□□□□ -0.51
RFFL-212ENST00000584655 EYA3Q99504 573 aa11.85□□□□□ -0.51
RFFL-212ENST00000584655 RIOK1Q9BRS2 568 aaKnown RBP11.85□□□□□ -0.51
RFFL-212ENST00000584655 PP2D1A8MPX8 630 aa11.85□□□□□ -0.51
RFFL-212ENST00000584655 WDHD1O75717 1129 aaPredicted RBP11.85□□□□□ -0.51
RFFL-212ENST00000584655 EPSTI1Q96J88 318 aa11.85□□□□□ -0.51
RFFL-212ENST00000584655 SHTN1A0MZ66 631 aa11.84□□□□□ -0.51
RFFL-212ENST00000584655 LETM2Q2VYF4 491 aa11.84□□□□□ -0.51
RFFL-212ENST00000584655 ANO1Q5XXA6 986 aa11.84□□□□□ -0.51
RFFL-212ENST00000584655 CNNM3Q8NE01 707 aa11.84□□□□□ -0.51
RFFL-212ENST00000584655 BIN2Q9UBW5 565 aaPredicted RBP11.84□□□□□ -0.51
RFFL-212ENST00000584655 CDK11BP21127 795 aaKnown RBP11.84□□□□□ -0.51
RFFL-212ENST00000584655 PTGS1P23219 599 aa11.84□□□□□ -0.51
RFFL-212ENST00000584655 CDAN1Q8IWY9 1227 aa11.84□□□□□ -0.51
RFFL-212ENST00000584655 POLRMTO00411 1230 aaKnown RBP11.84□□□□□ -0.51
RFFL-212ENST00000584655 PTMSP20962 102 aa11.84□□□□□ -0.51
RFFL-212ENST00000584655 SYKP43405 635 aa11.84□□□□□ -0.51
RFFL-212ENST00000584655 KIF23Q02241 960 aaPredicted RBP11.84□□□□□ -0.51
RFFL-212ENST00000584655 TTBK2Q6IQ55 1244 aa11.84□□□□□ -0.51
RFFL-212ENST00000584655 FBXO33Q7Z6M2 555 aa11.84□□□□□ -0.51
RFFL-212ENST00000584655 CBX8Q9HC52 389 aa11.84□□□□□ -0.51
RFFL-212ENST00000584655 STK32BQ9NY57 414 aa11.84□□□□□ -0.51
RFFL-212ENST00000584655 ZNF274Q96GC6 653 aaPredicted RBP11.83□□□□□ -0.51
RFFL-212ENST00000584655 INF2Q27J81 1249 aa11.83□□□□□ -0.52
RFFL-212ENST00000584655 AP5Z1O43299 807 aa11.83□□□□□ -0.52
RFFL-212ENST00000584655 CDKL5O76039 1030 aa11.83□□□□□ -0.52
RFFL-212ENST00000584655 TBC1D10BQ4KMP7 808 aaPredicted RBP11.83□□□□□ -0.52
RFFL-212ENST00000584655 SRBD1Q8N5C6 995 aaKnown RBP11.83□□□□□ -0.52
RFFL-212ENST00000584655 HOMER2Q9NSB8 354 aa11.83□□□□□ -0.52
RFFL-212ENST00000584655 BMP2KQ9NSY1 1161 aaPredicted RBP11.83□□□□□ -0.52
RFFL-212ENST00000584655 CNTNAP4Q9C0A0 1308 aa11.83□□□□□ -0.52
RFFL-212ENST00000584655 TNNI2P48788 182 aa11.83□□□□□ -0.52
RFFL-212ENST00000584655 DPCR1Q3MIW9 517 aa11.83□□□□□ -0.52
RFFL-212ENST00000584655 CCDC186Q7Z3E2 898 aa11.83□□□□□ -0.52
RFFL-212ENST00000584655 NLGN1Q8N2Q7 840 aa11.83□□□□□ -0.52
RFFL-212ENST00000584655 CERS5Q8N5B7 392 aa11.83□□□□□ -0.52
RFFL-212ENST00000584655 WDR66Q8TBY9 1149 aa11.83□□□□□ -0.52
RFFL-212ENST00000584655 MRPS27Q92552 414 aaKnown RBP11.83□□□□□ -0.52
RFFL-212ENST00000584655 FAM217BQ9NTX9 383 aaPredicted RBP11.83□□□□□ -0.52
RFFL-212ENST00000584655 PFKFB1P16118 471 aa11.82□□□□□ -0.52
RFFL-212ENST00000584655 BAG6P46379 1132 aa11.82□□□□□ -0.52
RFFL-212ENST00000584655 CEP95Q96GE4 821 aa11.82□□□□□ -0.52
RFFL-212ENST00000584655 CNNM2Q9H8M5 875 aa11.82□□□□□ -0.52
RFFL-212ENST00000584655 USP17L5A8MUK1 530 aa11.82□□□□□ -0.52
RFFL-212ENST00000584655 ZNF202O95125 648 aa11.82□□□□□ -0.52
RFFL-212ENST00000584655 NAPAP54920 295 aa11.82□□□□□ -0.52
RFFL-212ENST00000584655 FCHSD1Q86WN1 690 aa11.82□□□□□ -0.52
RFFL-212ENST00000584655 DDX4Q9NQI0 724 aaKnown RBP11.82□□□□□ -0.52
RFFL-212ENST00000584655 SLIT2O94813 1529 aa11.82□□□□□ -0.52
RFFL-212ENST00000584655 AKR1B1P15121 316 aa11.82□□□□□ -0.52
RFFL-212ENST00000584655 DGKZQ13574 1117 aa11.82□□□□□ -0.52
RFFL-212ENST00000584655 FBXO3Q9UK99 471 aa11.82□□□□□ -0.52
RFFL-212ENST00000584655 COL4A1P02462 1669 aa11.82□□□□□ -0.52
RFFL-212ENST00000584655 ZMYM6O95789 1325 aa11.81□□□□□ -0.52
RFFL-212ENST00000584655 UBE2SQ16763 222 aa11.81□□□□□ -0.52
RFFL-212ENST00000584655 KIAA2012Q0VF49 1180 aa11.81□□□□□ -0.52
RFFL-212ENST00000584655 SPTY2D1Q68D10 685 aaPredicted RBP11.81□□□□□ -0.52
RFFL-212ENST00000584655 TMEM260Q9NX78 707 aa11.81□□□□□ -0.52
RFFL-212ENST00000584655 KLRF2D3W0D1 207 aa11.81□□□□□ -0.52
RFFL-212ENST00000584655 CDK8P49336 464 aa11.81□□□□□ -0.52
RFFL-212ENST00000584655 TMEM87BQ96K49 555 aa11.81□□□□□ -0.52
RFFL-212ENST00000584655 DAGLAQ9Y4D2 1042 aa11.81□□□□□ -0.52
RFFL-212ENST00000584655 CCDC194A0A1B0GVG4 234 aa11.8□□□□□ -0.52
RFFL-212ENST00000584655 GNAT2P19087 354 aa11.8□□□□□ -0.52
RFFL-212ENST00000584655 TPD52L1Q16890 204 aaPredicted RBP11.8□□□□□ -0.52
RFFL-212ENST00000584655 LONRF3Q496Y0 759 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms