RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 RBPJLQ9UBG7 517 aa12.63□□□□□ -0.39
GGA3-219ENST00000584550 ATP11BQ9Y2G3 1177 aa12.63□□□□□ -0.39
GGA3-219ENST00000584550 ZBED9Q6R2W3 1325 aa12.62□□□□□ -0.39
GGA3-219ENST00000584550 FRMPD3Q5JV73 1810 aa12.62□□□□□ -0.39
GGA3-219ENST00000584550 MAST2Q6P0Q8 1798 aa12.62□□□□□ -0.39
GGA3-219ENST00000584550 GPR75-ASB3A0A0A6YYF3 556 aa12.62□□□□□ -0.39
GGA3-219ENST00000584550 CT47B1P0C2W7 299 aaPredicted RBP12.62□□□□□ -0.39
GGA3-219ENST00000584550 MAPK4P31152 587 aa12.62□□□□□ -0.39
GGA3-219ENST00000584550 RTP1P59025 263 aa12.62□□□□□ -0.39
GGA3-219ENST00000584550 TIMM10P62072 90 aa12.62□□□□□ -0.39
GGA3-219ENST00000584550 RASGRF1Q13972 1273 aa12.62□□□□□ -0.39
GGA3-219ENST00000584550 ALDH1L2Q3SY69 923 aa12.62□□□□□ -0.39
GGA3-219ENST00000584550 MORN1Q5T089 497 aa12.62□□□□□ -0.39
GGA3-219ENST00000584550 PLEKHH3Q7Z736 793 aa12.62□□□□□ -0.39
GGA3-219ENST00000584550 SYMPKQ92797 1274 aaKnown RBP12.62□□□□□ -0.39
GGA3-219ENST00000584550 FAM163AQ96GL9 167 aaPredicted RBP12.62□□□□□ -0.39
GGA3-219ENST00000584550 TBC1D2Q9BYX2 928 aa12.62□□□□□ -0.39
GGA3-219ENST00000584550 PRDM5Q9NQX1 630 aaPredicted RBP12.62□□□□□ -0.39
GGA3-219ENST00000584550 FLRT1Q9NZU1 646 aa12.62□□□□□ -0.39
GGA3-219ENST00000584550 LTBP2Q14767 1821 aa12.61□□□□□ -0.39
GGA3-219ENST00000584550 BACE1P56817 501 aa12.61□□□□□ -0.39
GGA3-219ENST00000584550 ERVK-9P63128 1117 aa12.61□□□□□ -0.39
GGA3-219ENST00000584550 ERVK-24P63145 666 aa12.61□□□□□ -0.39
GGA3-219ENST00000584550 JAG1P78504 1218 aa12.61□□□□□ -0.39
GGA3-219ENST00000584550 SHROOM1Q2M3G4 852 aaPredicted RBP12.61□□□□□ -0.39
GGA3-219ENST00000584550 WDR78Q5VTH9 848 aa12.61□□□□□ -0.39
GGA3-219ENST00000584550 SPTY2D1Q68D10 685 aaPredicted RBP12.61□□□□□ -0.39
GGA3-219ENST00000584550 POTEEQ6S8J3 1075 aa12.61□□□□□ -0.39
GGA3-219ENST00000584550 ERICH6Q7L0X2 663 aa12.61□□□□□ -0.39
GGA3-219ENST00000584550 ZNF384Q8TF68 577 aa12.61□□□□□ -0.39
GGA3-219ENST00000584550 BADQ92934 168 aa12.61□□□□□ -0.39
GGA3-219ENST00000584550 MYCNP04198 464 aaPredicted RBP12.6□□□□□ -0.39
GGA3-219ENST00000584550 HOXA7P31268 230 aaPredicted RBP12.6□□□□□ -0.39
GGA3-219ENST00000584550 RARSP54136 660 aaKnown RBP12.6□□□□□ -0.39
GGA3-219ENST00000584550 GJC2Q5T442 439 aaPredicted RBP12.6□□□□□ -0.39
GGA3-219ENST00000584550 TBC1D9Q6ZT07 1266 aa12.6□□□□□ -0.39
GGA3-219ENST00000584550 EDC3Q96F86 508 aaKnown RBP12.6□□□□□ -0.39
GGA3-219ENST00000584550 APBA2Q99767 749 aa12.6□□□□□ -0.39
GGA3-219ENST00000584550 WDR18Q9BV38 432 aa12.6□□□□□ -0.39
GGA3-219ENST00000584550 DDX20Q9UHI6 824 aaKnown RBP12.6□□□□□ -0.39
GGA3-219ENST00000584550 NOB1Q9ULX3 412 aaKnown RBP12.6□□□□□ -0.39
GGA3-219ENST00000584550 PA2G4Q9UQ80 394 aaKnown RBP12.6□□□□□ -0.39
GGA3-219ENST00000584550 TNFRSF10AO00220 468 aa12.59□□□□□ -0.39
GGA3-219ENST00000584550 CIAO1O76071 339 aa12.59□□□□□ -0.39
GGA3-219ENST00000584550 GDF11O95390 407 aa12.59□□□□□ -0.39
GGA3-219ENST00000584550 MAP2K5Q13163 448 aa12.59□□□□□ -0.39
GGA3-219ENST00000584550 MFSD14CQ5VZR4 134 aa12.59□□□□□ -0.39
GGA3-219ENST00000584550 ANO1Q5XXA6 986 aa12.59□□□□□ -0.39
GGA3-219ENST00000584550 LPAR1Q92633 364 aa12.59□□□□□ -0.39
GGA3-219ENST00000584550 YTHDC1Q96MU7 727 aaKnown RBP12.59□□□□□ -0.39
GGA3-219ENST00000584550 PTPRCP08575 1304 aa12.59□□□□□ -0.39
GGA3-219ENST00000584550 USP17L10C9JJH3 530 aa12.58□□□□□ -0.4
GGA3-219ENST00000584550 DNM1LO00429 736 aa12.58□□□□□ -0.4
GGA3-219ENST00000584550 NPM3O75607 178 aaKnown RBP12.58□□□□□ -0.4
GGA3-219ENST00000584550 CYP2C19P33261 490 aa12.58□□□□□ -0.4
GGA3-219ENST00000584550 IL15P40933 162 aaPredicted RBP12.58□□□□□ -0.4
GGA3-219ENST00000584550 ATP2B2Q01814 1243 aa12.58□□□□□ -0.4
GGA3-219ENST00000584550 PI16Q6UXB8 463 aa12.58□□□□□ -0.4
GGA3-219ENST00000584550 SLC39A5Q6ZMH5 540 aa12.58□□□□□ -0.4
GGA3-219ENST00000584550 SH3RF1Q7Z6J0 888 aa12.58□□□□□ -0.4
GGA3-219ENST00000584550 TEX11Q8IYF3 940 aa12.58□□□□□ -0.4
GGA3-219ENST00000584550 USP38Q8NB14 1042 aa12.58□□□□□ -0.4
GGA3-219ENST00000584550 TRPV1Q8NER1 839 aa12.58□□□□□ -0.4
GGA3-219ENST00000584550 SH3RF3Q8TEJ3 882 aaPredicted RBP12.58□□□□□ -0.4
GGA3-219ENST00000584550 RAI14Q9P0K7 980 aa12.58□□□□□ -0.4
GGA3-219ENST00000584550 HERC5Q9UII4 1024 aaKnown RBP12.58□□□□□ -0.4
GGA3-219ENST00000584550 C19orf81C9J6K1 198 aa12.57□□□□□ -0.4
GGA3-219ENST00000584550 BCAR3O75815 825 aa12.57□□□□□ -0.4
GGA3-219ENST00000584550 ASNSP08243 561 aa12.57□□□□□ -0.4
GGA3-219ENST00000584550 SMAD3P84022 425 aaKnown RBP12.57□□□□□ -0.4
GGA3-219ENST00000584550 ZYXQ15942 572 aaKnown RBP12.57□□□□□ -0.4
GGA3-219ENST00000584550 TRIM60Q495X7 471 aa12.57□□□□□ -0.4
GGA3-219ENST00000584550 TJAP1Q5JTD0 557 aa12.57□□□□□ -0.4
GGA3-219ENST00000584550 PPM1EQ8WY54 764 aa12.57□□□□□ -0.4
GGA3-219ENST00000584550 FRAT1Q92837 279 aaPredicted RBP12.57□□□□□ -0.4
GGA3-219ENST00000584550 NSUN4Q96CB9 384 aaKnown RBP12.57□□□□□ -0.4
GGA3-219ENST00000584550 XAGE2Q96GT9 111 aa12.57□□□□□ -0.4
GGA3-219ENST00000584550 EMILIN3Q9NT22 766 aa12.57□□□□□ -0.4
GGA3-219ENST00000584550 PI4KBQ9UBF8 816 aa12.57□□□□□ -0.4
GGA3-219ENST00000584550 TTC28Q96AY4 2481 aa12.56□□□□□ -0.4
GGA3-219ENST00000584550 A0A1B0GUL7 405 aa12.56□□□□□ -0.4
GGA3-219ENST00000584550 TRIM43BA6NCK2 446 aa12.56□□□□□ -0.4
GGA3-219ENST00000584550 CNMDO75829 334 aa12.56□□□□□ -0.4
GGA3-219ENST00000584550 LDHCP07864 332 aa12.56□□□□□ -0.4
GGA3-219ENST00000584550 GSTO1P78417 241 aa12.56□□□□□ -0.4
GGA3-219ENST00000584550 GRIN2CQ14957 1233 aa12.56□□□□□ -0.4
GGA3-219ENST00000584550 CRACR2BQ8N4Y2 399 aaPredicted RBP12.56□□□□□ -0.4
GGA3-219ENST00000584550 NPLOC4Q8TAT6 608 aa12.56□□□□□ -0.4
GGA3-219ENST00000584550 FERMT2Q96AC1 680 aa12.56□□□□□ -0.4
GGA3-219ENST00000584550 TRIM43Q96BQ3 446 aaPredicted RBP12.56□□□□□ -0.4
GGA3-219ENST00000584550 NEUROD6Q96NK8 337 aa12.56□□□□□ -0.4
GGA3-219ENST00000584550 TRIM34Q9BYJ4 488 aa12.56□□□□□ -0.4
GGA3-219ENST00000584550 HMG20BQ9P0W2 317 aa12.56□□□□□ -0.4
GGA3-219ENST00000584550 FBXO3Q9UK99 471 aa12.56□□□□□ -0.4
GGA3-219ENST00000584550 RLFQ13129 1914 aa12.56□□□□□ -0.4
GGA3-219ENST00000584550 SIPA1L1O43166 1804 aa12.55□□□□□ -0.4
GGA3-219ENST00000584550 TMEM265A0A087WTH1 108 aa12.55□□□□□ -0.4
GGA3-219ENST00000584550 MSCO60682 206 aa12.55□□□□□ -0.4
GGA3-219ENST00000584550 GLRX3O76003 335 aaKnown RBP12.55□□□□□ -0.4
GGA3-219ENST00000584550 UBTFL1P0CB47 393 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms