RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 DDX60LQ5H9U9 1706 aaKnown RBP16.43■□□□□ 0.22
COPS3-218ENST00000584216 GLRX3O76003 335 aaKnown RBP16.43■□□□□ 0.22
COPS3-218ENST00000584216 COL6A1P12109 1028 aa16.43■□□□□ 0.22
COPS3-218ENST00000584216 CACNB2Q08289 660 aaPredicted RBP16.43■□□□□ 0.22
COPS3-218ENST00000584216 MTX1Q13505 466 aa16.43■□□□□ 0.22
COPS3-218ENST00000584216 ATF7IPQ6VMQ6 1270 aa16.43■□□□□ 0.22
COPS3-218ENST00000584216 FOXP4Q8IVH2 680 aaPredicted RBP16.43■□□□□ 0.22
COPS3-218ENST00000584216 IGSF3O75054 1194 aa16.42■□□□□ 0.22
COPS3-218ENST00000584216 ERVK-9P63128 1117 aa16.42■□□□□ 0.22
COPS3-218ENST00000584216 ERVK-24P63145 666 aa16.42■□□□□ 0.22
COPS3-218ENST00000584216 RRP1BQ14684 758 aaKnown RBP16.42■□□□□ 0.22
COPS3-218ENST00000584216 TBC1D9Q6ZT07 1266 aa16.42■□□□□ 0.22
COPS3-218ENST00000584216 GPR142Q7Z601 462 aa16.42■□□□□ 0.22
COPS3-218ENST00000584216 PLEKHH3Q7Z736 793 aa16.42■□□□□ 0.22
COPS3-218ENST00000584216 SH3RF3Q8TEJ3 882 aaPredicted RBP16.42■□□□□ 0.22
COPS3-218ENST00000584216 ALPK3Q96L96 1907 aa16.42■□□□□ 0.22
COPS3-218ENST00000584216 HLA-DOAP06340 250 aa16.41■□□□□ 0.22
COPS3-218ENST00000584216 CCNA1P78396 465 aa16.41■□□□□ 0.22
COPS3-218ENST00000584216 FAM109BQ6ICB4 259 aaPredicted RBP16.41■□□□□ 0.22
COPS3-218ENST00000584216 NAA16Q6N069 864 aaPredicted RBP16.41■□□□□ 0.22
COPS3-218ENST00000584216 PI16Q6UXB8 463 aa16.41■□□□□ 0.22
COPS3-218ENST00000584216 LBHD1Q9BQE6 289 aaPredicted RBP16.41■□□□□ 0.22
COPS3-218ENST00000584216 TXNRD2Q9NNW7 524 aa16.41■□□□□ 0.22
COPS3-218ENST00000584216 MSCO60682 206 aa16.4■□□□□ 0.22
COPS3-218ENST00000584216 G3BP1Q13283 466 aaKnown RBP eCLIP16.4■□□□□ 0.22
COPS3-218ENST00000584216 LRRC26Q2I0M4 334 aa16.4■□□□□ 0.22
COPS3-218ENST00000584216 MORN1Q5T089 497 aa16.4■□□□□ 0.22
COPS3-218ENST00000584216 MFSD14CQ5VZR4 134 aa16.4■□□□□ 0.22
COPS3-218ENST00000584216 LHX8Q68G74 356 aa16.4■□□□□ 0.22
COPS3-218ENST00000584216 USP17L2Q6R6M4 530 aa16.4■□□□□ 0.22
COPS3-218ENST00000584216 METTL16Q86W50 562 aaKnown RBP16.4■□□□□ 0.22
COPS3-218ENST00000584216 USP6NLQ92738 828 aa16.4■□□□□ 0.22
COPS3-218ENST00000584216 PAGR1Q9BTK6 254 aa16.4■□□□□ 0.22
COPS3-218ENST00000584216 AATFQ9NY61 560 aaKnown RBP eCLIP16.4■□□□□ 0.22
COPS3-218ENST00000584216 RBPJLQ9UBG7 517 aa16.4■□□□□ 0.22
COPS3-218ENST00000584216 PRKAG2Q9UGJ0 569 aa16.4■□□□□ 0.22
COPS3-218ENST00000584216 ZBTB21Q9ULJ3 1066 aa16.4■□□□□ 0.22
COPS3-218ENST00000584216 FLT1P17948 1338 aa16.4■□□□□ 0.22
COPS3-218ENST00000584216 CCND3P30281 292 aaPredicted RBP16.39■□□□□ 0.21
COPS3-218ENST00000584216 MCAMP43121 646 aa16.39■□□□□ 0.21
COPS3-218ENST00000584216 PPP4CP60510 307 aa16.39■□□□□ 0.21
COPS3-218ENST00000584216 MDM2Q00987 491 aaPredicted RBP16.39■□□□□ 0.21
COPS3-218ENST00000584216 TGFBRAP1Q8WUH2 860 aa16.39■□□□□ 0.21
COPS3-218ENST00000584216 ARHGAP45Q92619 1136 aa16.39■□□□□ 0.21
COPS3-218ENST00000584216 RABGAP1Q9Y3P9 1069 aa16.39■□□□□ 0.21
COPS3-218ENST00000584216 A0A0C4DFX4 3053 aa16.38■□□□□ 0.21
COPS3-218ENST00000584216 MAP2K5Q13163 448 aa16.38■□□□□ 0.21
COPS3-218ENST00000584216 CCDC158Q5M9N0 1113 aa16.38■□□□□ 0.21
COPS3-218ENST00000584216 CERS3Q8IU89 383 aa16.38■□□□□ 0.21
COPS3-218ENST00000584216 MAPKAPK5Q8IW41 473 aa16.38■□□□□ 0.21
COPS3-218ENST00000584216 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.38■□□□□ 0.21
COPS3-218ENST00000584216 EDC3Q96F86 508 aaKnown RBP16.38■□□□□ 0.21
COPS3-218ENST00000584216 PORCNQ9H237 461 aa16.38■□□□□ 0.21
COPS3-218ENST00000584216 ATAD5Q96QE3 1844 aa16.38■□□□□ 0.21
COPS3-218ENST00000584216 DOCK3Q8IZD9 2030 aa16.37■□□□□ 0.21
COPS3-218ENST00000584216 ZNF316A6NFI3 1004 aaPredicted RBP16.37■□□□□ 0.21
COPS3-218ENST00000584216 GDF11O95390 407 aa16.37■□□□□ 0.21
COPS3-218ENST00000584216 GNAI2P04899 355 aa16.37■□□□□ 0.21
COPS3-218ENST00000584216 USP14P54578 494 aa16.37■□□□□ 0.21
COPS3-218ENST00000584216 CCL14Q16627 93 aa16.37■□□□□ 0.21
COPS3-218ENST00000584216 Q3C1V9 767 aa16.37■□□□□ 0.21
COPS3-218ENST00000584216 TTC39AQ5SRH9 613 aa16.37■□□□□ 0.21
COPS3-218ENST00000584216 FEZ1Q99689 392 aa16.37■□□□□ 0.21
COPS3-218ENST00000584216 DNAJC18Q9H819 358 aa16.37■□□□□ 0.21
COPS3-218ENST00000584216 IVNS1ABPQ9Y6Y0 642 aa16.37■□□□□ 0.21
COPS3-218ENST00000584216 PLXNB2O15031 1838 aa16.36■□□□□ 0.21
COPS3-218ENST00000584216 SLC15A5A6NIM6 579 aa16.36■□□□□ 0.21
COPS3-218ENST00000584216 USP17L15C9J2P7 530 aa16.36■□□□□ 0.21
COPS3-218ENST00000584216 USP17L13C9JLJ4 530 aa16.36■□□□□ 0.21
COPS3-218ENST00000584216 USP17L11C9JVI0 530 aa16.36■□□□□ 0.21
COPS3-218ENST00000584216 USP17L18D6R9N7 530 aa16.36■□□□□ 0.21
COPS3-218ENST00000584216 USP17L22D6RA61 530 aa16.36■□□□□ 0.21
COPS3-218ENST00000584216 USP17L17D6RBQ6 530 aa16.36■□□□□ 0.21
COPS3-218ENST00000584216 USP17L19D6RCP7 530 aa16.36■□□□□ 0.21
COPS3-218ENST00000584216 USP17L20D6RJB6 530 aa16.36■□□□□ 0.21
COPS3-218ENST00000584216 POTEB2H3BUK9 544 aa16.36■□□□□ 0.21
COPS3-218ENST00000584216 USP17L24Q0WX57 530 aa16.36■□□□□ 0.21
COPS3-218ENST00000584216 TRMT2AQ8IZ69 625 aaKnown RBP16.36■□□□□ 0.21
COPS3-218ENST00000584216 CDCA7LQ96GN5 454 aa16.36■□□□□ 0.21
COPS3-218ENST00000584216 C12orf42Q96LP6 360 aa16.36■□□□□ 0.21
COPS3-218ENST00000584216 SENP6Q9GZR1 1112 aaPredicted RBP16.36■□□□□ 0.21
COPS3-218ENST00000584216 EMILIN3Q9NT22 766 aa16.36■□□□□ 0.21
COPS3-218ENST00000584216 DDX20Q9UHI6 824 aaKnown RBP16.36■□□□□ 0.21
COPS3-218ENST00000584216 PALD1Q9ULE6 856 aa16.36■□□□□ 0.21
COPS3-218ENST00000584216 DNM1LO00429 736 aa16.35■□□□□ 0.21
COPS3-218ENST00000584216 IPO8O15397 1037 aaKnown RBP16.35■□□□□ 0.21
COPS3-218ENST00000584216 PEX10O60683 326 aa16.35■□□□□ 0.21
COPS3-218ENST00000584216 ATP2B2Q01814 1243 aa16.35■□□□□ 0.21
COPS3-218ENST00000584216 ZNF697Q5TEC3 545 aa16.35■□□□□ 0.21
COPS3-218ENST00000584216 WDR78Q5VTH9 848 aa16.35■□□□□ 0.21
COPS3-218ENST00000584216 LPAR1Q92633 364 aa16.35■□□□□ 0.21
COPS3-218ENST00000584216 COL25A1Q9BXS0 654 aaPredicted RBP16.35■□□□□ 0.21
COPS3-218ENST00000584216 GPR108Q9NPR9 543 aa16.35■□□□□ 0.21
COPS3-218ENST00000584216 GH2P01242 217 aa16.34■□□□□ 0.21
COPS3-218ENST00000584216 CNGA1P29973 690 aa16.34■□□□□ 0.21
COPS3-218ENST00000584216 JAG1P78504 1218 aa16.34■□□□□ 0.21
COPS3-218ENST00000584216 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.34■□□□□ 0.21
COPS3-218ENST00000584216 HOXC6P09630 235 aa16.33■□□□□ 0.2
COPS3-218ENST00000584216 PTPREP23469 700 aa16.33■□□□□ 0.2
COPS3-218ENST00000584216 RARSP54136 660 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms