RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 TRIM60Q495X7 471 aa14.23□□□□□ -0.13
NUP85-224ENST00000583948 MORN1Q5T089 497 aa14.23□□□□□ -0.13
NUP85-224ENST00000583948 GPR142Q7Z601 462 aa14.23□□□□□ -0.13
NUP85-224ENST00000583948 ZNF384Q8TF68 577 aa14.23□□□□□ -0.13
NUP85-224ENST00000583948 FERMT2Q96AC1 680 aa14.23□□□□□ -0.13
NUP85-224ENST00000583948 SRCIN1Q9C0H9 1055 aa14.23□□□□□ -0.13
NUP85-224ENST00000583948 CACNA1FO60840 1977 aa14.23□□□□□ -0.13
NUP85-224ENST00000583948 HOXD11P31277 338 aaPredicted RBP14.22□□□□□ -0.13
NUP85-224ENST00000583948 HERVK_113P62684 666 aa14.22□□□□□ -0.13
NUP85-224ENST00000583948 SMAD3P84022 425 aaKnown RBP14.22□□□□□ -0.13
NUP85-224ENST00000583948 ADAMTS19Q8TE59 1207 aa14.22□□□□□ -0.13
NUP85-224ENST00000583948 SIL1Q9H173 461 aa14.22□□□□□ -0.13
NUP85-224ENST00000583948 PRKAG2Q9UGJ0 569 aa14.22□□□□□ -0.13
NUP85-224ENST00000583948 XRCC5P13010 732 aaKnown RBP14.21□□□□□ -0.13
NUP85-224ENST00000583948 SLC5A1P13866 664 aa14.21□□□□□ -0.13
NUP85-224ENST00000583948 IRX3P78415 501 aaPredicted RBP14.21□□□□□ -0.13
NUP85-224ENST00000583948 RABL6Q3YEC7 729 aaPredicted RBP14.21□□□□□ -0.13
NUP85-224ENST00000583948 SLC39A5Q6ZMH5 540 aa14.21□□□□□ -0.13
NUP85-224ENST00000583948 ATG9AQ7Z3C6 839 aa14.21□□□□□ -0.13
NUP85-224ENST00000583948 GPRC5AQ8NFJ5 357 aa14.21□□□□□ -0.13
NUP85-224ENST00000583948 NPLOC4Q8TAT6 608 aa14.21□□□□□ -0.13
NUP85-224ENST00000583948 PDLIM7Q9NR12 457 aa14.21□□□□□ -0.13
NUP85-224ENST00000583948 MYO9BQ13459 2157 aa14.2□□□□□ -0.14
NUP85-224ENST00000583948 SIPA1L1O43166 1804 aa14.2□□□□□ -0.14
NUP85-224ENST00000583948 GAKO14976 1311 aa14.2□□□□□ -0.14
NUP85-224ENST00000583948 GRXCR1A8MXD5 290 aa14.2□□□□□ -0.14
NUP85-224ENST00000583948 CNMDO75829 334 aa14.2□□□□□ -0.14
NUP85-224ENST00000583948 RFX5P48382 616 aaPredicted RBP14.2□□□□□ -0.14
NUP85-224ENST00000583948 RHBDL3P58872 404 aa14.2□□□□□ -0.14
NUP85-224ENST00000583948 ERVK-9P63128 1117 aa14.2□□□□□ -0.14
NUP85-224ENST00000583948 ERVK-24P63145 666 aa14.2□□□□□ -0.14
NUP85-224ENST00000583948 PLEKHH3Q7Z736 793 aa14.2□□□□□ -0.14
NUP85-224ENST00000583948 ABCF2Q9UG63 623 aa14.2□□□□□ -0.14
NUP85-224ENST00000583948 DDX20Q9UHI6 824 aaKnown RBP14.2□□□□□ -0.14
NUP85-224ENST00000583948 CHD7Q9P2D1 2997 aa14.19□□□□□ -0.14
NUP85-224ENST00000583948 USP17L5A8MUK1 530 aa14.19□□□□□ -0.14
NUP85-224ENST00000583948 ALDH1L1O75891 902 aa14.19□□□□□ -0.14
NUP85-224ENST00000583948 CT47B1P0C2W7 299 aaPredicted RBP14.19□□□□□ -0.14
NUP85-224ENST00000583948 CAP2P40123 477 aa14.19□□□□□ -0.14
NUP85-224ENST00000583948 PBX2P40425 430 aa14.19□□□□□ -0.14
NUP85-224ENST00000583948 RGS2P41220 211 aa14.19□□□□□ -0.14
NUP85-224ENST00000583948 SH3D19Q5HYK7 790 aa14.19□□□□□ -0.14
NUP85-224ENST00000583948 PRAMEF19Q5SWL8 479 aa14.19□□□□□ -0.14
NUP85-224ENST00000583948 WDR78Q5VTH9 848 aa14.19□□□□□ -0.14
NUP85-224ENST00000583948 LPIN2Q92539 896 aa14.19□□□□□ -0.14
NUP85-224ENST00000583948 RNPC3Q96LT9 517 aaKnown RBP14.19□□□□□ -0.14
NUP85-224ENST00000583948 BCAR3O75815 825 aa14.18□□□□□ -0.14
NUP85-224ENST00000583948 GDF11O95390 407 aa14.18□□□□□ -0.14
NUP85-224ENST00000583948 DNAJB2P25686 324 aa14.18□□□□□ -0.14
NUP85-224ENST00000583948 ADCYAP1R1P41586 468 aa14.18□□□□□ -0.14
NUP85-224ENST00000583948 RARSP54136 660 aaKnown RBP14.18□□□□□ -0.14
NUP85-224ENST00000583948 ZYXQ15942 572 aaKnown RBP14.18□□□□□ -0.14
NUP85-224ENST00000583948 SOCS4Q8WXH5 440 aa14.18□□□□□ -0.14
NUP85-224ENST00000583948 EDC3Q96F86 508 aaKnown RBP14.18□□□□□ -0.14
NUP85-224ENST00000583948 UHRF1Q96T88 793 aaPredicted RBP14.18□□□□□ -0.14
NUP85-224ENST00000583948 APBA2Q99767 749 aa14.18□□□□□ -0.14
NUP85-224ENST00000583948 PRDM12Q9H4Q4 367 aa14.18□□□□□ -0.14
NUP85-224ENST00000583948 PLXNA1Q9UIW2 1896 aa14.18□□□□□ -0.14
NUP85-224ENST00000583948 UTYO14607 1347 aa14.17□□□□□ -0.14
NUP85-224ENST00000583948 EYA2O00167 538 aa14.17□□□□□ -0.14
NUP85-224ENST00000583948 MAP2K5Q13163 448 aa14.17□□□□□ -0.14
NUP85-224ENST00000583948 PABPC4Q13310 644 aaKnown RBP eCLIP14.17□□□□□ -0.14
NUP85-224ENST00000583948 ADGRE1Q14246 886 aa14.17□□□□□ -0.14
NUP85-224ENST00000583948 ATP2B3Q16720 1220 aa14.17□□□□□ -0.14
NUP85-224ENST00000583948 PI16Q6UXB8 463 aa14.17□□□□□ -0.14
NUP85-224ENST00000583948 DZIP1Q86YF9 867 aaKnown RBP14.17□□□□□ -0.14
NUP85-224ENST00000583948 CCAR1Q8IX12 1150 aaKnown RBP14.17□□□□□ -0.14
NUP85-224ENST00000583948 LPAR1Q92633 364 aa14.17□□□□□ -0.14
NUP85-224ENST00000583948 ASB2Q96Q27 587 aa14.17□□□□□ -0.14
NUP85-224ENST00000583948 OSBPL5Q9H0X9 879 aaPredicted RBP14.17□□□□□ -0.14
NUP85-224ENST00000583948 ZNF576Q9H609 170 aa14.17□□□□□ -0.14
NUP85-224ENST00000583948 NCOR1O75376 2440 aa14.17□□□□□ -0.14
NUP85-224ENST00000583948 DNM1LO00429 736 aa14.16□□□□□ -0.14
NUP85-224ENST00000583948 TBC1D12O60347 775 aa14.16□□□□□ -0.14
NUP85-224ENST00000583948 MAPK4P31152 587 aa14.16□□□□□ -0.14
NUP85-224ENST00000583948 BACE1P56817 501 aa14.16□□□□□ -0.14
NUP85-224ENST00000583948 MECOMQ03112 1051 aa14.16□□□□□ -0.14
NUP85-224ENST00000583948 TLE2Q04725 743 aa14.16□□□□□ -0.14
NUP85-224ENST00000583948 RASGRF1Q13972 1273 aa14.16□□□□□ -0.14
NUP85-224ENST00000583948 TBC1D9Q6ZT07 1266 aa14.16□□□□□ -0.14
NUP85-224ENST00000583948 DNAJC18Q9H819 358 aa14.16□□□□□ -0.14
NUP85-224ENST00000583948 EMILIN3Q9NT22 766 aa14.16□□□□□ -0.14
NUP85-224ENST00000583948 SMC4Q9NTJ3 1288 aa14.16□□□□□ -0.14
NUP85-224ENST00000583948 PA2G4Q9UQ80 394 aaKnown RBP14.16□□□□□ -0.14
NUP85-224ENST00000583948 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.16□□□□□ -0.14
NUP85-224ENST00000583948 MROH7-TTC4A0A0A0MT08 1334 aa14.15□□□□□ -0.14
NUP85-224ENST00000583948 KIF16BQ96L93 1317 aa14.15□□□□□ -0.14
NUP85-224ENST00000583948 HOXA7P31268 230 aaPredicted RBP14.15□□□□□ -0.14
NUP85-224ENST00000583948 TFF2Q03403 129 aa14.15□□□□□ -0.14
NUP85-224ENST00000583948 MFSD14CQ5VZR4 134 aa14.15□□□□□ -0.14
NUP85-224ENST00000583948 FRAT1Q92837 279 aaPredicted RBP14.15□□□□□ -0.14
NUP85-224ENST00000583948 EPHX3Q9H6B9 360 aa14.15□□□□□ -0.14
NUP85-224ENST00000583948 CWC22Q9HCG8 908 aaKnown RBP14.15□□□□□ -0.14
NUP85-224ENST00000583948 TMOD4Q9NZQ9 345 aa14.15□□□□□ -0.14
NUP85-224ENST00000583948 BTBD7Q9P203 1132 aa14.15□□□□□ -0.14
NUP85-224ENST00000583948 SALL1Q9NSC2 1324 aa14.15□□□□□ -0.15
NUP85-224ENST00000583948 TIMM10P62072 90 aa14.14□□□□□ -0.15
NUP85-224ENST00000583948 ATP2B2Q01814 1243 aa14.14□□□□□ -0.15
NUP85-224ENST00000583948 ERICH6BQ5W0A0 696 aa14.14□□□□□ -0.15
NUP85-224ENST00000583948 CCDC102BQ68D86 513 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms