RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 FAM198AQ9UFP1 575 aa9.72□□□□□ -0.85
SMCHD1-210ENST00000583800 ZNF112Q9UJU3 913 aa9.72□□□□□ -0.85
SMCHD1-210ENST00000583800 KCNH4Q9UQ05 1017 aa9.72□□□□□ -0.85
SMCHD1-210ENST00000583800 GNRH1P01148 92 aa9.71□□□□□ -0.86
SMCHD1-210ENST00000583800 PRMT2P55345 433 aa9.71□□□□□ -0.86
SMCHD1-210ENST00000583800 ATP2B3Q16720 1220 aa9.71□□□□□ -0.86
SMCHD1-210ENST00000583800 NOL9Q5SY16 702 aaKnown RBP9.71□□□□□ -0.86
SMCHD1-210ENST00000583800 TRAF7Q6Q0C0 670 aa9.71□□□□□ -0.86
SMCHD1-210ENST00000583800 ZFPM1Q8IX07 1006 aa9.71□□□□□ -0.86
SMCHD1-210ENST00000583800 KCTD17Q8N5Z5 321 aa9.71□□□□□ -0.86
SMCHD1-210ENST00000583800 TRIM47Q96LD4 638 aa9.71□□□□□ -0.86
SMCHD1-210ENST00000583800 USP40Q9NVE5 1235 aa9.71□□□□□ -0.86
SMCHD1-210ENST00000583800 SRRDQ9UH36 339 aa9.71□□□□□ -0.86
SMCHD1-210ENST00000583800 SEPT9Q9UHD8 586 aaPredicted RBP9.71□□□□□ -0.86
SMCHD1-210ENST00000583800 MYPNQ86TC9 1320 aa9.71□□□□□ -0.86
SMCHD1-210ENST00000583800 ATRNL1Q5VV63 1379 aa9.71□□□□□ -0.86
SMCHD1-210ENST00000583800 ALPK3Q96L96 1907 aa9.7□□□□□ -0.86
SMCHD1-210ENST00000583800 E9PSI1 815 aa9.7□□□□□ -0.86
SMCHD1-210ENST00000583800 H0YGN5 161 aa9.7□□□□□ -0.86
SMCHD1-210ENST00000583800 GFRA3O60609 400 aa9.7□□□□□ -0.86
SMCHD1-210ENST00000583800 FMNL1O95466 1100 aaPredicted RBP9.7□□□□□ -0.86
SMCHD1-210ENST00000583800 LDHBP07195 334 aaKnown RBP9.7□□□□□ -0.86
SMCHD1-210ENST00000583800 SLURP2P0DP57 97 aa9.7□□□□□ -0.86
SMCHD1-210ENST00000583800 CYP2C8P10632 490 aa9.7□□□□□ -0.86
SMCHD1-210ENST00000583800 GRK4P32298 578 aa9.7□□□□□ -0.86
SMCHD1-210ENST00000583800 PHKA1P46020 1223 aa9.7□□□□□ -0.86
SMCHD1-210ENST00000583800 RAET1EQ8TD07 263 aa9.7□□□□□ -0.86
SMCHD1-210ENST00000583800 PARK7Q99497 189 aaKnown RBP9.7□□□□□ -0.86
SMCHD1-210ENST00000583800 RFX7Q2KHR2 1363 aa9.7□□□□□ -0.86
SMCHD1-210ENST00000583800 LOC285556D6RIA3 1793 aa9.69□□□□□ -0.86
SMCHD1-210ENST00000583800 CIAO1O76071 339 aa9.69□□□□□ -0.86
SMCHD1-210ENST00000583800 UBTFL1P0CB47 393 aaPredicted RBP9.69□□□□□ -0.86
SMCHD1-210ENST00000583800 BCRP11274 1271 aa9.69□□□□□ -0.86
SMCHD1-210ENST00000583800 HOXD10P28358 340 aa9.69□□□□□ -0.86
SMCHD1-210ENST00000583800 ADORA1P30542 326 aa9.69□□□□□ -0.86
SMCHD1-210ENST00000583800 RGS3P49796 1198 aa9.69□□□□□ -0.86
SMCHD1-210ENST00000583800 PRKCZQ05513 592 aa9.69□□□□□ -0.86
SMCHD1-210ENST00000583800 SLFN5Q08AF3 891 aa9.69□□□□□ -0.86
SMCHD1-210ENST00000583800 GPAT2Q6NUI2 795 aa9.69□□□□□ -0.86
SMCHD1-210ENST00000583800 SCYL3Q8IZE3 742 aa9.69□□□□□ -0.86
SMCHD1-210ENST00000583800 PCMTD1Q96MG8 357 aaPredicted RBP9.69□□□□□ -0.86
SMCHD1-210ENST00000583800 SALL1Q9NSC2 1324 aa9.69□□□□□ -0.86
SMCHD1-210ENST00000583800 SMC4Q9NTJ3 1288 aa9.69□□□□□ -0.86
SMCHD1-210ENST00000583800 CEP126Q9P2H0 1117 aa9.69□□□□□ -0.86
SMCHD1-210ENST00000583800 TSR3Q9UJK0 312 aaKnown RBP9.69□□□□□ -0.86
SMCHD1-210ENST00000583800 PA2G4Q9UQ80 394 aaKnown RBP9.69□□□□□ -0.86
SMCHD1-210ENST00000583800 GAKO14976 1311 aa9.68□□□□□ -0.86
SMCHD1-210ENST00000583800 PHF20L1A8MW92 1017 aa9.68□□□□□ -0.86
SMCHD1-210ENST00000583800 CCL5P13501 91 aa9.68□□□□□ -0.86
SMCHD1-210ENST00000583800 FCGRTP55899 365 aa9.68□□□□□ -0.86
SMCHD1-210ENST00000583800 MCM6Q14566 821 aa9.68□□□□□ -0.86
SMCHD1-210ENST00000583800 ALDH1L2Q3SY69 923 aa9.68□□□□□ -0.86
SMCHD1-210ENST00000583800 C6orf132Q5T0Z8 1188 aa9.68□□□□□ -0.86
SMCHD1-210ENST00000583800 SH3BP5LQ7L8J4 393 aa9.68□□□□□ -0.86
SMCHD1-210ENST00000583800 DPF3Q92784 378 aa9.68□□□□□ -0.86
SMCHD1-210ENST00000583800 CDCA7LQ96GN5 454 aa9.68□□□□□ -0.86
SMCHD1-210ENST00000583800 GNL3LQ9NVN8 582 aaKnown RBP9.68□□□□□ -0.86
SMCHD1-210ENST00000583800 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.68□□□□□ -0.86
SMCHD1-210ENST00000583800 DENND2AQ9ULE3 1009 aa9.68□□□□□ -0.86
SMCHD1-210ENST00000583800 GABRQQ9UN88 632 aa9.68□□□□□ -0.86
SMCHD1-210ENST00000583800 LRRFIP2Q9Y608 721 aaKnown RBP9.68□□□□□ -0.86
SMCHD1-210ENST00000583800 CDK5RAP2Q96SN8 1893 aa9.68□□□□□ -0.86
SMCHD1-210ENST00000583800 A0A0G2JLL6 359 aaPredicted RBP9.67□□□□□ -0.86
SMCHD1-210ENST00000583800 DDTLA6NHG4 134 aaPredicted RBP9.67□□□□□ -0.86
SMCHD1-210ENST00000583800 TRIM6-TRIM34B2RNG4 842 aa9.67□□□□□ -0.86
SMCHD1-210ENST00000583800 CXCL11O14625 94 aa9.67□□□□□ -0.86
SMCHD1-210ENST00000583800 PTPRAP18433 802 aa9.67□□□□□ -0.86
SMCHD1-210ENST00000583800 IL15P40933 162 aaPredicted RBP9.67□□□□□ -0.86
SMCHD1-210ENST00000583800 GJA8P48165 433 aa9.67□□□□□ -0.86
SMCHD1-210ENST00000583800 UBXN2AP68543 259 aa9.67□□□□□ -0.86
SMCHD1-210ENST00000583800 PICALMQ13492 652 aa9.67□□□□□ -0.86
SMCHD1-210ENST00000583800 RASGRF1Q13972 1273 aa9.67□□□□□ -0.86
SMCHD1-210ENST00000583800 CCDC102BQ68D86 513 aa9.67□□□□□ -0.86
SMCHD1-210ENST00000583800 GADL1Q6ZQY3 521 aa9.67□□□□□ -0.86
SMCHD1-210ENST00000583800 PRRT2Q7Z6L0 340 aaPredicted RBP9.67□□□□□ -0.86
SMCHD1-210ENST00000583800 CCDC84Q86UT8 332 aaPredicted RBP9.67□□□□□ -0.86
SMCHD1-210ENST00000583800 DZIP1Q86YF9 867 aaKnown RBP9.67□□□□□ -0.86
SMCHD1-210ENST00000583800 ZSCAN29Q8IWY8 852 aaPredicted RBP9.67□□□□□ -0.86
SMCHD1-210ENST00000583800 NKX2-3Q8TAU0 364 aa9.67□□□□□ -0.86
SMCHD1-210ENST00000583800 IDI2Q9BXS1 227 aa9.67□□□□□ -0.86
SMCHD1-210ENST00000583800 RNF208Q9H0X6 261 aa9.67□□□□□ -0.86
SMCHD1-210ENST00000583800 DDX4Q9NQI0 724 aaKnown RBP9.67□□□□□ -0.86
SMCHD1-210ENST00000583800 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.67□□□□□ -0.86
SMCHD1-210ENST00000583800 BIN2Q9UBW5 565 aaPredicted RBP9.67□□□□□ -0.86
SMCHD1-210ENST00000583800 ABCF2Q9UG63 623 aa9.67□□□□□ -0.86
SMCHD1-210ENST00000583800 ZHX2Q9Y6X8 837 aa9.67□□□□□ -0.86
SMCHD1-210ENST00000583800 MYO5AQ9Y4I1 1855 aaKnown RBP9.67□□□□□ -0.86
SMCHD1-210ENST00000583800 SIPA1L1O43166 1804 aa9.67□□□□□ -0.86
SMCHD1-210ENST00000583800 MAST2Q6P0Q8 1798 aa9.66□□□□□ -0.86
SMCHD1-210ENST00000583800 SZT2Q5T011 3432 aa9.66□□□□□ -0.86
SMCHD1-210ENST00000583800 GRXCR2A6NFK2 248 aa9.66□□□□□ -0.86
SMCHD1-210ENST00000583800 ENTPD3O75355 529 aa9.66□□□□□ -0.86
SMCHD1-210ENST00000583800 GJB1P08034 283 aa9.66□□□□□ -0.86
SMCHD1-210ENST00000583800 BTDP43251 543 aa9.66□□□□□ -0.86
SMCHD1-210ENST00000583800 UBE2Q1Q7Z7E8 422 aa9.66□□□□□ -0.86
SMCHD1-210ENST00000583800 ZGPATQ8N5A5 531 aaKnown RBP9.66□□□□□ -0.86
SMCHD1-210ENST00000583800 MEIS3Q99687 375 aa9.66□□□□□ -0.86
SMCHD1-210ENST00000583800 UNC93B1Q9H1C4 597 aa9.66□□□□□ -0.86
SMCHD1-210ENST00000583800 PICK1Q9NRD5 415 aa9.66□□□□□ -0.86
SMCHD1-210ENST00000583800 RBM27Q9P2N5 1060 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms