RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 MAPKAPK5Q8IW41 473 aa25.08■■□□□ 1.6
SRSF1-206ENST00000583741 TRIB2Q92519 343 aa25.08■■□□□ 1.6
SRSF1-206ENST00000583741 LRCH3Q96II8 777 aa25.08■■□□□ 1.6
SRSF1-206ENST00000583741 DHX36Q9H2U1 1008 aaKnown RBP25.08■■□□□ 1.6
SRSF1-206ENST00000583741 FLT1P17948 1338 aa25.07■■□□□ 1.6
SRSF1-206ENST00000583741 MS4A1P11836 297 aa25.07■■□□□ 1.6
SRSF1-206ENST00000583741 BACE1P56817 501 aa25.07■■□□□ 1.6
SRSF1-206ENST00000583741 ANKLE1Q8NAG6 615 aa25.07■■□□□ 1.6
SRSF1-206ENST00000583741 TGFBRAP1Q8WUH2 860 aa25.07■■□□□ 1.6
SRSF1-206ENST00000583741 CLUAP1Q96AJ1 413 aa25.07■■□□□ 1.6
SRSF1-206ENST00000583741 NOL10Q9BSC4 688 aaKnown RBP25.07■■□□□ 1.6
SRSF1-206ENST00000583741 TXNRD2Q9NNW7 524 aa25.07■■□□□ 1.6
SRSF1-206ENST00000583741 HMX1Q9NP08 348 aaPredicted RBP25.07■■□□□ 1.6
SRSF1-206ENST00000583741 ASNSP08243 561 aa25.06■■□□□ 1.6
SRSF1-206ENST00000583741 IRX3P78415 501 aaPredicted RBP25.06■■□□□ 1.6
SRSF1-206ENST00000583741 C7orf61Q8IZ16 206 aa25.06■■□□□ 1.6
SRSF1-206ENST00000583741 P2RX7Q99572 595 aaKnown RBP25.06■■□□□ 1.6
SRSF1-206ENST00000583741 BAG3O95817 575 aa25.05■■□□□ 1.6
SRSF1-206ENST00000583741 PPP4CP60510 307 aa25.05■■□□□ 1.6
SRSF1-206ENST00000583741 METTL16Q86W50 562 aaKnown RBP25.05■■□□□ 1.6
SRSF1-206ENST00000583741 DBNDD2Q9BQY9 259 aa25.05■■□□□ 1.6
SRSF1-206ENST00000583741 GDF11O95390 407 aa25.04■■□□□ 1.6
SRSF1-206ENST00000583741 CYP2E1P05181 493 aaPredicted RBP25.04■■□□□ 1.6
SRSF1-206ENST00000583741 CYP2B6P20813 491 aa25.04■■□□□ 1.6
SRSF1-206ENST00000583741 HOXA7P31268 230 aaPredicted RBP25.04■■□□□ 1.6
SRSF1-206ENST00000583741 TNNI3KQ59H18 835 aa25.04■■□□□ 1.6
SRSF1-206ENST00000583741 TTC39AQ5SRH9 613 aa25.04■■□□□ 1.6
SRSF1-206ENST00000583741 FTSJ3Q8IY81 847 aaKnown RBP25.04■■□□□ 1.6
SRSF1-206ENST00000583741 TMOD4Q9NZQ9 345 aa25.04■■□□□ 1.6
SRSF1-206ENST00000583741 PALD1Q9ULE6 856 aa25.04■■□□□ 1.6
SRSF1-206ENST00000583741 FPGT-TNNI3KV9GXZ4 949 aa25.04■■□□□ 1.6
SRSF1-206ENST00000583741 DNAH12Q6ZR08 3092 aa25.04■■□□□ 1.6
SRSF1-206ENST00000583741 PLCG2P16885 1265 aa25.03■■□□□ 1.6
SRSF1-206ENST00000583741 HERVK_113P62684 666 aa25.03■■□□□ 1.6
SRSF1-206ENST00000583741 MAP3K21Q5TCX8 1036 aa25.03■■□□□ 1.6
SRSF1-206ENST00000583741 PANK1Q8TE04 598 aa25.03■■□□□ 1.6
SRSF1-206ENST00000583741 GDF15Q99988 308 aa25.03■■□□□ 1.6
SRSF1-206ENST00000583741 ZMYND8Q9ULU4 1186 aaPredicted RBP25.03■■□□□ 1.6
SRSF1-206ENST00000583741 PRKAR2AP13861 404 aaKnown RBP25.02■■□□□ 1.6
SRSF1-206ENST00000583741 POLA2Q14181 598 aa25.02■■□□□ 1.6
SRSF1-206ENST00000583741 NBPF3Q9H094 633 aa25.02■■□□□ 1.6
SRSF1-206ENST00000583741 GPR108Q9NPR9 543 aa25.02■■□□□ 1.6
SRSF1-206ENST00000583741 ZBTB21Q9ULJ3 1066 aa25.02■■□□□ 1.6
SRSF1-206ENST00000583741 MYH1P12882 1939 aa25.02■■□□□ 1.6
SRSF1-206ENST00000583741 ERICH6BQ5W0A0 696 aa25.02■■□□□ 1.6
SRSF1-206ENST00000583741 POTEEQ6S8J3 1075 aa25.02■■□□□ 1.6
SRSF1-206ENST00000583741 CRACR2BQ8N4Y2 399 aaPredicted RBP25.02■■□□□ 1.6
SRSF1-206ENST00000583741 GPRC5AQ8NFJ5 357 aa25.02■■□□□ 1.6
SRSF1-206ENST00000583741 CRBNQ96SW2 442 aa25.02■■□□□ 1.6
SRSF1-206ENST00000583741 RBPJLQ9UBG7 517 aa25.02■■□□□ 1.6
SRSF1-206ENST00000583741 SAP30BPQ9UHR5 308 aaKnown RBP25.02■■□□□ 1.6
SRSF1-206ENST00000583741 OGDHLQ9ULD0 1010 aa25.02■■□□□ 1.6
SRSF1-206ENST00000583741 C19orf81C9J6K1 198 aa25.01■■□□□ 1.59
SRSF1-206ENST00000583741 USP17L10C9JJH3 530 aa25.01■■□□□ 1.59
SRSF1-206ENST00000583741 RLBP1P12271 317 aa25.01■■□□□ 1.59
SRSF1-206ENST00000583741 CCDC158Q5M9N0 1113 aa25.01■■□□□ 1.59
SRSF1-206ENST00000583741 FOXP4Q8IVH2 680 aaPredicted RBP25.01■■□□□ 1.59
SRSF1-206ENST00000583741 TMEM57Q8N5G2 664 aa25.01■■□□□ 1.59
SRSF1-206ENST00000583741 C11orf49Q9H6J7 331 aa25.01■■□□□ 1.59
SRSF1-206ENST00000583741 PIH1D3Q9NQM4 214 aaKnown RBP25.01■■□□□ 1.59
SRSF1-206ENST00000583741 BMP8BP34820 402 aa25■■□□□ 1.59
SRSF1-206ENST00000583741 ZAP70P43403 619 aa25■■□□□ 1.59
SRSF1-206ENST00000583741 Q3C1V9 767 aa25■■□□□ 1.59
SRSF1-206ENST00000583741 SOCS4Q8WXH5 440 aa25■■□□□ 1.59
SRSF1-206ENST00000583741 NUDT12Q9BQG2 462 aa25■■□□□ 1.59
SRSF1-206ENST00000583741 PORCNQ9H237 461 aa25■■□□□ 1.59
SRSF1-206ENST00000583741 LAMA2P24043 3122 aaKnown RBP25■■□□□ 1.59
SRSF1-206ENST00000583741 PFASO15067 1338 aa25■■□□□ 1.59
SRSF1-206ENST00000583741 XRCC5P13010 732 aaKnown RBP24.99■■□□□ 1.59
SRSF1-206ENST00000583741 SYN1P17600 705 aa24.99■■□□□ 1.59
SRSF1-206ENST00000583741 DYNLL1P63167 89 aaKnown RBP24.99■■□□□ 1.59
SRSF1-206ENST00000583741 SSH3Q8TE77 659 aa24.99■■□□□ 1.59
SRSF1-206ENST00000583741 TRIM34Q9BYJ4 488 aa24.99■■□□□ 1.59
SRSF1-206ENST00000583741 EMILIN3Q9NT22 766 aa24.99■■□□□ 1.59
SRSF1-206ENST00000583741 OS9Q13438 667 aaPredicted RBP24.98■■□□□ 1.59
SRSF1-206ENST00000583741 EXOC6Q8TAG9 804 aa24.98■■□□□ 1.59
SRSF1-206ENST00000583741 USP6NLQ92738 828 aa24.98■■□□□ 1.59
SRSF1-206ENST00000583741 GINM1Q9NU53 330 aa24.98■■□□□ 1.59
SRSF1-206ENST00000583741 TLR7Q9NYK1 1049 aaKnown RBP24.98■■□□□ 1.59
SRSF1-206ENST00000583741 FRMPD3Q5JV73 1810 aa24.98■■□□□ 1.59
SRSF1-206ENST00000583741 ERVK-9P63128 1117 aa24.97■■□□□ 1.59
SRSF1-206ENST00000583741 ERVK-24P63145 666 aa24.97■■□□□ 1.59
SRSF1-206ENST00000583741 ZNF512BQ96KM6 892 aaPredicted RBP24.97■■□□□ 1.59
SRSF1-206ENST00000583741 PAGR1Q9BTK6 254 aa24.97■■□□□ 1.59
SRSF1-206ENST00000583741 DBNLQ9UJU6 430 aaKnown RBP24.97■■□□□ 1.59
SRSF1-206ENST00000583741 COG6Q9Y2V7 657 aa24.97■■□□□ 1.59
SRSF1-206ENST00000583741 ZKSCAN1P17029 563 aaPredicted RBP24.96■■□□□ 1.59
SRSF1-206ENST00000583741 MAPK4P31152 587 aa24.96■■□□□ 1.59
SRSF1-206ENST00000583741 CACNB2Q08289 660 aaPredicted RBP24.96■■□□□ 1.59
SRSF1-206ENST00000583741 CCL14Q16627 93 aa24.96■■□□□ 1.59
SRSF1-206ENST00000583741 C1orf115Q9H7X2 142 aa24.96■■□□□ 1.59
SRSF1-206ENST00000583741 SURF6O75683 361 aaKnown RBP24.96■■□□□ 1.59
SRSF1-206ENST00000583741 MAGEA10P43363 369 aaPredicted RBP24.96■■□□□ 1.59
SRSF1-206ENST00000583741 ATP8B2P98198 1209 aa24.96■■□□□ 1.59
SRSF1-206ENST00000583741 GPR142Q7Z601 462 aa24.96■■□□□ 1.59
SRSF1-206ENST00000583741 CUL9Q8IWT3 2517 aa24.95■■□□□ 1.59
SRSF1-206ENST00000583741 GH2P01242 217 aa24.95■■□□□ 1.58
SRSF1-206ENST00000583741 HLA-DOAP06340 250 aa24.95■■□□□ 1.58
SRSF1-206ENST00000583741 MORN1Q5T089 497 aa24.95■■□□□ 1.58
SRSF1-206ENST00000583741 SLC17A8Q8NDX2 589 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms