RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 HSPA4P34932 840 aa11.02□□□□□ -0.65
UBBP4-201ENST00000583708 CREB3L3Q68CJ9 461 aa11.02□□□□□ -0.65
UBBP4-201ENST00000583708 RGMBQ6NW40 437 aa11.02□□□□□ -0.65
UBBP4-201ENST00000583708 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.02□□□□□ -0.65
UBBP4-201ENST00000583708 NEDD1Q8NHV4 660 aa11.02□□□□□ -0.65
UBBP4-201ENST00000583708 IL25Q9H293 177 aa11.02□□□□□ -0.65
UBBP4-201ENST00000583708 SH2D4AQ9H788 454 aa11.02□□□□□ -0.65
UBBP4-201ENST00000583708 ZNF408Q9H9D4 720 aa11.02□□□□□ -0.65
UBBP4-201ENST00000583708 SPDYE5A6NIY4 337 aa11.01□□□□□ -0.65
UBBP4-201ENST00000583708 C19orf81C9J6K1 198 aa11.01□□□□□ -0.65
UBBP4-201ENST00000583708 SLC27A2O14975 620 aa11.01□□□□□ -0.65
UBBP4-201ENST00000583708 CYP21A2P08686 494 aa11.01□□□□□ -0.65
UBBP4-201ENST00000583708 CYP2D6P10635 497 aa11.01□□□□□ -0.65
UBBP4-201ENST00000583708 RASA1P20936 1047 aa11.01□□□□□ -0.65
UBBP4-201ENST00000583708 PSMA5P28066 241 aa11.01□□□□□ -0.65
UBBP4-201ENST00000583708 PPIL2Q13356 520 aa11.01□□□□□ -0.65
UBBP4-201ENST00000583708 DEFB115Q30KQ5 88 aa11.01□□□□□ -0.65
UBBP4-201ENST00000583708 C8orf34Q49A92 452 aa11.01□□□□□ -0.65
UBBP4-201ENST00000583708 RALYLQ86SE5 291 aaKnown RBP11.01□□□□□ -0.65
UBBP4-201ENST00000583708 IQCA1Q86XH1 822 aa11.01□□□□□ -0.65
UBBP4-201ENST00000583708 CDAN1Q8IWY9 1227 aa11.01□□□□□ -0.65
UBBP4-201ENST00000583708 TMTC2Q8N394 836 aa11.01□□□□□ -0.65
UBBP4-201ENST00000583708 NCOA7Q8NI08 942 aa11.01□□□□□ -0.65
UBBP4-201ENST00000583708 IL17RAQ96F46 866 aa11.01□□□□□ -0.65
UBBP4-201ENST00000583708 TM6SF1Q9BZW5 370 aa11.01□□□□□ -0.65
UBBP4-201ENST00000583708 DNAJC18Q9H819 358 aa11.01□□□□□ -0.65
UBBP4-201ENST00000583708 SCAF8Q9UPN6 1271 aaKnown RBP11.01□□□□□ -0.65
UBBP4-201ENST00000583708 SSC5DA1L4H1 1573 aa11.01□□□□□ -0.65
UBBP4-201ENST00000583708 TRPM7Q96QT4 1865 aa11.01□□□□□ -0.65
UBBP4-201ENST00000583708 WDR19Q8NEZ3 1342 aa11.01□□□□□ -0.65
UBBP4-201ENST00000583708 MYH1P12882 1939 aa11.01□□□□□ -0.65
UBBP4-201ENST00000583708 CYP2D7A0A087X1C5 515 aa11□□□□□ -0.65
UBBP4-201ENST00000583708 TSPY3P0CV98 308 aa11□□□□□ -0.65
UBBP4-201ENST00000583708 TSPY8P0CW00 308 aa11□□□□□ -0.65
UBBP4-201ENST00000583708 PTPRAP18433 802 aa11□□□□□ -0.65
UBBP4-201ENST00000583708 MAP2K2P36507 400 aa11□□□□□ -0.65
UBBP4-201ENST00000583708 NOVP48745 357 aa11□□□□□ -0.65
UBBP4-201ENST00000583708 ZNF157P51786 506 aaPredicted RBP11□□□□□ -0.65
UBBP4-201ENST00000583708 USP14P54578 494 aa11□□□□□ -0.65
UBBP4-201ENST00000583708 NOGQ13253 232 aa11□□□□□ -0.65
UBBP4-201ENST00000583708 VGLL4Q14135 290 aa11□□□□□ -0.65
UBBP4-201ENST00000583708 SART3Q15020 963 aaKnown RBP11□□□□□ -0.65
UBBP4-201ENST00000583708 DGKHQ86XP1 1220 aa11□□□□□ -0.65
UBBP4-201ENST00000583708 ANKS1AQ92625 1134 aa11□□□□□ -0.65
UBBP4-201ENST00000583708 MKL1Q969V6 931 aa11□□□□□ -0.65
UBBP4-201ENST00000583708 DYNLL2Q96FJ2 89 aa11□□□□□ -0.65
UBBP4-201ENST00000583708 ZCCHC17Q9NP64 241 aaKnown RBP11□□□□□ -0.65
UBBP4-201ENST00000583708 NYAP2Q9P242 653 aa11□□□□□ -0.65
UBBP4-201ENST00000583708 ZBTB21Q9ULJ3 1066 aa11□□□□□ -0.65
UBBP4-201ENST00000583708 ABT1Q9ULW3 272 aaKnown RBP11□□□□□ -0.65
UBBP4-201ENST00000583708 PLIN4Q96Q06 1357 aa11□□□□□ -0.65
UBBP4-201ENST00000583708 CDK5RAP2Q96SN8 1893 aa11□□□□□ -0.65
UBBP4-201ENST00000583708 DDX60LQ5H9U9 1706 aaKnown RBP10.99□□□□□ -0.65
UBBP4-201ENST00000583708 MANSC4A6NHS7 340 aaPredicted RBP10.99□□□□□ -0.65
UBBP4-201ENST00000583708 TSPY2A6NKD2 308 aa10.99□□□□□ -0.65
UBBP4-201ENST00000583708 E7EWF7 191 aa10.99□□□□□ -0.65
UBBP4-201ENST00000583708 RANBP6O60518 1105 aaKnown RBP10.99□□□□□ -0.65
UBBP4-201ENST00000583708 GH2P01242 217 aa10.99□□□□□ -0.65
UBBP4-201ENST00000583708 INPP5BP32019 993 aa10.99□□□□□ -0.65
UBBP4-201ENST00000583708 MCM5P33992 734 aa10.99□□□□□ -0.65
UBBP4-201ENST00000583708 GTF2A2P52657 109 aa10.99□□□□□ -0.65
UBBP4-201ENST00000583708 TFAP4Q01664 338 aa10.99□□□□□ -0.65
UBBP4-201ENST00000583708 CTDSPL2Q05D32 466 aa10.99□□□□□ -0.65
UBBP4-201ENST00000583708 DLK2Q6UY11 383 aa10.99□□□□□ -0.65
UBBP4-201ENST00000583708 FASTKD5Q7L8L6 764 aaKnown RBP10.99□□□□□ -0.65
UBBP4-201ENST00000583708 FBXL16Q8N461 479 aa10.99□□□□□ -0.65
UBBP4-201ENST00000583708 ZNF280CQ8ND82 737 aa10.99□□□□□ -0.65
UBBP4-201ENST00000583708 ZKSCAN4Q969J2 545 aaPredicted RBP10.99□□□□□ -0.65
UBBP4-201ENST00000583708 NEK1Q96PY6 1258 aa10.99□□□□□ -0.65
UBBP4-201ENST00000583708 BACH2Q9BYV9 841 aa10.99□□□□□ -0.65
UBBP4-201ENST00000583708 KIAA1683Q9H0B3 1180 aa10.99□□□□□ -0.65
UBBP4-201ENST00000583708 ARHGEF10LQ9HCE6 1279 aa10.99□□□□□ -0.65
UBBP4-201ENST00000583708 KCNH4Q9UQ05 1017 aa10.99□□□□□ -0.65
UBBP4-201ENST00000583708 SNCAIPQ9Y6H5 919 aa10.99□□□□□ -0.65
UBBP4-201ENST00000583708 NAV1Q8NEY1 1877 aa10.99□□□□□ -0.65
UBBP4-201ENST00000583708 IGKV6D-41A0A0C4DH26 115 aa10.98□□□□□ -0.65
UBBP4-201ENST00000583708 ERICH2A1L162 156 aa10.98□□□□□ -0.65
UBBP4-201ENST00000583708 TESPA1A2RU30 521 aaPredicted RBP10.98□□□□□ -0.65
UBBP4-201ENST00000583708 TTLL1O95922 423 aa10.98□□□□□ -0.65
UBBP4-201ENST00000583708 SLC10A3P09131 477 aa10.98□□□□□ -0.65
UBBP4-201ENST00000583708 CETPP11597 493 aa10.98□□□□□ -0.65
UBBP4-201ENST00000583708 HAND2P61296 217 aa10.98□□□□□ -0.65
UBBP4-201ENST00000583708 FMR1Q06787 632 aaKnown RBP eCLIP10.98□□□□□ -0.65
UBBP4-201ENST00000583708 SNAPC2Q13487 334 aa10.98□□□□□ -0.65
UBBP4-201ENST00000583708 PRKG1Q13976 671 aa10.98□□□□□ -0.65
UBBP4-201ENST00000583708 SH3D19Q5HYK7 790 aa10.98□□□□□ -0.65
UBBP4-201ENST00000583708 SPRYD7Q5W111 196 aa10.98□□□□□ -0.65
UBBP4-201ENST00000583708 OTUD7BQ6GQQ9 843 aa10.98□□□□□ -0.65
UBBP4-201ENST00000583708 RCSD1Q6JBY9 416 aa10.98□□□□□ -0.65
UBBP4-201ENST00000583708 LPAR1Q92633 364 aa10.98□□□□□ -0.65
UBBP4-201ENST00000583708 WNK4Q96J92 1243 aa10.98□□□□□ -0.65
UBBP4-201ENST00000583708 TMEM87BQ96K49 555 aa10.98□□□□□ -0.65
UBBP4-201ENST00000583708 TOMM22Q9NS69 142 aa10.98□□□□□ -0.65
UBBP4-201ENST00000583708 MTMR4Q9NYA4 1195 aa10.98□□□□□ -0.65
UBBP4-201ENST00000583708 ZSWIM5Q9P217 1185 aa10.98□□□□□ -0.65
UBBP4-201ENST00000583708 AFG3L2Q9Y4W6 797 aa10.98□□□□□ -0.65
UBBP4-201ENST00000583708 ZHX2Q9Y6X8 837 aa10.98□□□□□ -0.65
UBBP4-201ENST00000583708 USP17L10C9JJH3 530 aa10.97□□□□□ -0.65
UBBP4-201ENST00000583708 MPHOSPH10O00566 681 aaKnown RBP10.97□□□□□ -0.65
UBBP4-201ENST00000583708 AKR1B1P15121 316 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 641.4 ms