RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 UNC93B1Q9H1C4 597 aa10.61□□□□□ -0.71
CDK5RAP3-229ENST00000583697 DNAJC18Q9H819 358 aa10.61□□□□□ -0.71
CDK5RAP3-229ENST00000583697 GINM1Q9NU53 330 aa10.61□□□□□ -0.71
CDK5RAP3-229ENST00000583697 SAP30BPQ9UHR5 308 aaKnown RBP10.61□□□□□ -0.71
CDK5RAP3-229ENST00000583697 PALD1Q9ULE6 856 aa10.61□□□□□ -0.71
CDK5RAP3-229ENST00000583697 ZBTB21Q9ULJ3 1066 aa10.61□□□□□ -0.71
CDK5RAP3-229ENST00000583697 EXOC6BQ9Y2D4 811 aa10.61□□□□□ -0.71
CDK5RAP3-229ENST00000583697 MYH8P13535 1937 aa10.6□□□□□ -0.71
CDK5RAP3-229ENST00000583697 FARP2O94887 1054 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-229ENST00000583697 BACE1P56817 501 aa10.6□□□□□ -0.71
CDK5RAP3-229ENST00000583697 DYNLL1P63167 89 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-229ENST00000583697 RRP1BQ14684 758 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-229ENST00000583697 TMED8Q6PL24 325 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-229ENST00000583697 FOXP4Q8IVH2 680 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-229ENST00000583697 FEZ1Q99689 392 aa10.6□□□□□ -0.71
CDK5RAP3-229ENST00000583697 WDR18Q9BV38 432 aa10.6□□□□□ -0.71
CDK5RAP3-229ENST00000583697 ASCC2Q9H1I8 757 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-229ENST00000583697 PLXNB2O15031 1838 aa10.6□□□□□ -0.71
CDK5RAP3-229ENST00000583697 C19orf81C9J6K1 198 aa10.59□□□□□ -0.71
CDK5RAP3-229ENST00000583697 USP17L10C9JJH3 530 aa10.59□□□□□ -0.71
CDK5RAP3-229ENST00000583697 HMMRO75330 724 aa10.59□□□□□ -0.71
CDK5RAP3-229ENST00000583697 SGPL1O95470 568 aa10.59□□□□□ -0.71
CDK5RAP3-229ENST00000583697 HMGCRP04035 888 aa10.59□□□□□ -0.71
CDK5RAP3-229ENST00000583697 CAPN2P17655 700 aa10.59□□□□□ -0.71
CDK5RAP3-229ENST00000583697 TTF1Q15361 905 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-229ENST00000583697 CCAR1Q8IX12 1150 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-229ENST00000583697 PANK1Q8TE04 598 aa10.59□□□□□ -0.71
CDK5RAP3-229ENST00000583697 SOCS4Q8WXH5 440 aa10.59□□□□□ -0.71
CDK5RAP3-229ENST00000583697 DEFB118Q96PH6 123 aa10.59□□□□□ -0.71
CDK5RAP3-229ENST00000583697 CWC22Q9HCG8 908 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-229ENST00000583697 IL1RAPL2Q9NP60 686 aa10.59□□□□□ -0.71
CDK5RAP3-229ENST00000583697 NDUFB9Q9Y6M9 179 aa10.59□□□□□ -0.71
CDK5RAP3-229ENST00000583697 H0YGN5 161 aa10.58□□□□□ -0.72
CDK5RAP3-229ENST00000583697 TFRCP02786 760 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-229ENST00000583697 HERVK_113P62684 666 aa10.58□□□□□ -0.72
CDK5RAP3-229ENST00000583697 PDE3AQ14432 1141 aa10.58□□□□□ -0.72
CDK5RAP3-229ENST00000583697 ZYXQ15942 572 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-229ENST00000583697 CHRDL2Q6WN34 429 aa10.58□□□□□ -0.72
CDK5RAP3-229ENST00000583697 TTC6Q86TZ1 520 aa10.58□□□□□ -0.72
CDK5RAP3-229ENST00000583697 METTL16Q86W50 562 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-229ENST00000583697 CLASRPQ8N2M8 674 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-229ENST00000583697 GTF3C2Q8WUA4 911 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-229ENST00000583697 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.58□□□□□ -0.72
CDK5RAP3-229ENST00000583697 EHD4Q9H223 541 aa10.58□□□□□ -0.72
CDK5RAP3-229ENST00000583697 ANTXR1Q9H6X2 564 aa10.58□□□□□ -0.72
CDK5RAP3-229ENST00000583697 MORF4L1Q9UBU8 362 aa10.58□□□□□ -0.72
CDK5RAP3-229ENST00000583697 SERPINB13Q9UIV8 391 aa10.58□□□□□ -0.72
CDK5RAP3-229ENST00000583697 DDX19BQ9UMR2 479 aa10.58□□□□□ -0.72
CDK5RAP3-229ENST00000583697 COLQQ9Y215 455 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-229ENST00000583697 NR2E3Q9Y5X4 410 aa10.58□□□□□ -0.72
CDK5RAP3-229ENST00000583697 KIAA0100Q14667 2235 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-229ENST00000583697 MYH7P12883 1935 aa10.58□□□□□ -0.72
CDK5RAP3-229ENST00000583697 FRMPD3Q5JV73 1810 aa10.58□□□□□ -0.72
CDK5RAP3-229ENST00000583697 APBB1O00213 710 aa10.57□□□□□ -0.72
CDK5RAP3-229ENST00000583697 GH2P01242 217 aa10.57□□□□□ -0.72
CDK5RAP3-229ENST00000583697 IFIT2P09913 472 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP3-229ENST00000583697 HOXA7P31268 230 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP3-229ENST00000583697 RAB3GAP1Q15042 981 aa10.57□□□□□ -0.72
CDK5RAP3-229ENST00000583697 SHROOM1Q2M3G4 852 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP3-229ENST00000583697 USP17L2Q6R6M4 530 aa10.57□□□□□ -0.72
CDK5RAP3-229ENST00000583697 RHPN1Q8TCX5 695 aa10.57□□□□□ -0.72
CDK5RAP3-229ENST00000583697 KIF1BPQ96EK5 621 aa10.57□□□□□ -0.72
CDK5RAP3-229ENST00000583697 DNAJC2Q99543 621 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP3-229ENST00000583697 PAGR1Q9BTK6 254 aa10.57□□□□□ -0.72
CDK5RAP3-229ENST00000583697 BCL11AQ9H165 835 aa10.57□□□□□ -0.72
CDK5RAP3-229ENST00000583697 CHMP4BQ9H444 224 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP3-229ENST00000583697 HMX1Q9NP08 348 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP3-229ENST00000583697 PAK6Q9NQU5 681 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP3-229ENST00000583697 A0A0G2JMZ2 1700 aa10.56□□□□□ -0.72
CDK5RAP3-229ENST00000583697 MAGEB6P1A0A0J9YX57 407 aa10.56□□□□□ -0.72
CDK5RAP3-229ENST00000583697 EVI5O60447 810 aa10.56□□□□□ -0.72
CDK5RAP3-229ENST00000583697 POLR3DP05423 398 aaPredicted RBP10.56□□□□□ -0.72
CDK5RAP3-229ENST00000583697 MAPK4P31152 587 aa10.56□□□□□ -0.72
CDK5RAP3-229ENST00000583697 FXR1P51114 621 aaKnown RBP eCLIP10.56□□□□□ -0.72
CDK5RAP3-229ENST00000583697 USP14P54578 494 aa10.56□□□□□ -0.72
CDK5RAP3-229ENST00000583697 JAG1P78504 1218 aa10.56□□□□□ -0.72
CDK5RAP3-229ENST00000583697 CERKLQ49MI3 558 aaPredicted RBP10.56□□□□□ -0.72
CDK5RAP3-229ENST00000583697 TATDN1Q6P1N9 297 aa10.56□□□□□ -0.72
CDK5RAP3-229ENST00000583697 UBE2Q1Q7Z7E8 422 aa10.56□□□□□ -0.72
CDK5RAP3-229ENST00000583697 RPAP2Q8IXW5 612 aaPredicted RBP10.56□□□□□ -0.72
CDK5RAP3-229ENST00000583697 GPRC5AQ8NFJ5 357 aa10.56□□□□□ -0.72
CDK5RAP3-229ENST00000583697 NUDT12Q9BQG2 462 aa10.56□□□□□ -0.72
CDK5RAP3-229ENST00000583697 CRNKL1Q9BZJ0 848 aaKnown RBP10.56□□□□□ -0.72
CDK5RAP3-229ENST00000583697 CABP5Q9NP86 173 aa10.56□□□□□ -0.72
CDK5RAP3-229ENST00000583697 ALPK3Q96L96 1907 aa10.55□□□□□ -0.72
CDK5RAP3-229ENST00000583697 GOLIM4O00461 696 aa10.55□□□□□ -0.72
CDK5RAP3-229ENST00000583697 ZKSCAN1P17029 563 aaPredicted RBP10.55□□□□□ -0.72
CDK5RAP3-229ENST00000583697 CYP2B6P20813 491 aa10.55□□□□□ -0.72
CDK5RAP3-229ENST00000583697 ERVK-9P63128 1117 aa10.55□□□□□ -0.72
CDK5RAP3-229ENST00000583697 ERVK-24P63145 666 aa10.55□□□□□ -0.72
CDK5RAP3-229ENST00000583697 ABCB5Q2M3G0 1257 aa10.55□□□□□ -0.72
CDK5RAP3-229ENST00000583697 SLC9C2Q5TAH2 1124 aa10.55□□□□□ -0.72
CDK5RAP3-229ENST00000583697 NECAB2Q7Z6G3 386 aa10.55□□□□□ -0.72
CDK5RAP3-229ENST00000583697 ANKLE1Q8NAG6 615 aa10.55□□□□□ -0.72
CDK5RAP3-229ENST00000583697 TRIB2Q92519 343 aa10.55□□□□□ -0.72
CDK5RAP3-229ENST00000583697 C12orf42Q96LP6 360 aa10.55□□□□□ -0.72
CDK5RAP3-229ENST00000583697 RIOK1Q9BRS2 568 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-229ENST00000583697 COG6Q9Y2V7 657 aa10.55□□□□□ -0.72
CDK5RAP3-229ENST00000583697 RPTORQ8N122 1335 aa10.55□□□□□ -0.72
CDK5RAP3-229ENST00000583697 ZNF236Q9UL36 1845 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms