RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 TRIM34Q9BYJ4 488 aa25.83■■□□□ 1.73
TSEN54-208ENST00000583173 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.83■■□□□ 1.73
TSEN54-208ENST00000583173 ZMYM6O95789 1325 aa25.83■■□□□ 1.73
TSEN54-208ENST00000583173 ROBO3Q96MS0 1386 aa25.82■■□□□ 1.72
TSEN54-208ENST00000583173 IRF6O14896 467 aa25.82■■□□□ 1.72
TSEN54-208ENST00000583173 GUCY1A2P33402 732 aa25.82■■□□□ 1.72
TSEN54-208ENST00000583173 PPARAQ07869 468 aa25.82■■□□□ 1.72
TSEN54-208ENST00000583173 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.82■■□□□ 1.72
TSEN54-208ENST00000583173 KCNH4Q9UQ05 1017 aa25.82■■□□□ 1.72
TSEN54-208ENST00000583173 AFG3L2Q9Y4W6 797 aa25.82■■□□□ 1.72
TSEN54-208ENST00000583173 TACC3Q9Y6A5 838 aa25.82■■□□□ 1.72
TSEN54-208ENST00000583173 FGRP09769 529 aa25.81■■□□□ 1.72
TSEN54-208ENST00000583173 MKRN3Q13064 507 aaKnown RBP25.81■■□□□ 1.72
TSEN54-208ENST00000583173 PICK1Q9NRD5 415 aa25.81■■□□□ 1.72
TSEN54-208ENST00000583173 ZHX2Q9Y6X8 837 aa25.81■■□□□ 1.72
TSEN54-208ENST00000583173 PCNTO95613 3336 aa25.81■■□□□ 1.72
TSEN54-208ENST00000583173 GDF11O95390 407 aa25.8■■□□□ 1.72
TSEN54-208ENST00000583173 ASNSP08243 561 aa25.8■■□□□ 1.72
TSEN54-208ENST00000583173 REM2Q8IYK8 340 aaPredicted RBP25.8■■□□□ 1.72
TSEN54-208ENST00000583173 OTUD5Q96G74 571 aa25.8■■□□□ 1.72
TSEN54-208ENST00000583173 ESYT1Q9BSJ8 1104 aa25.8■■□□□ 1.72
TSEN54-208ENST00000583173 CXCL11O14625 94 aa25.79■■□□□ 1.72
TSEN54-208ENST00000583173 PTH1RQ03431 593 aa25.79■■□□□ 1.72
TSEN54-208ENST00000583173 CCDC84Q86UT8 332 aaPredicted RBP25.79■■□□□ 1.72
TSEN54-208ENST00000583173 WDR18Q9BV38 432 aa25.79■■□□□ 1.72
TSEN54-208ENST00000583173 WBP1LQ9NX94 342 aa25.79■■□□□ 1.72
TSEN54-208ENST00000583173 ZBTB21Q9ULJ3 1066 aa25.79■■□□□ 1.72
TSEN54-208ENST00000583173 THSD7BQ9C0I4 1608 aa25.78■■□□□ 1.72
TSEN54-208ENST00000583173 MANSC4A6NHS7 340 aaPredicted RBP25.78■■□□□ 1.72
TSEN54-208ENST00000583173 USP17L5A8MUK1 530 aa25.78■■□□□ 1.72
TSEN54-208ENST00000583173 GH2P01242 217 aa25.78■■□□□ 1.72
TSEN54-208ENST00000583173 RASA1P20936 1047 aa25.78■■□□□ 1.72
TSEN54-208ENST00000583173 INHBEP58166 350 aa25.78■■□□□ 1.72
TSEN54-208ENST00000583173 MOGSQ13724 837 aa25.78■■□□□ 1.72
TSEN54-208ENST00000583173 ABCB5Q2M3G0 1257 aa25.78■■□□□ 1.72
TSEN54-208ENST00000583173 CCDC17Q96LX7 622 aa25.78■■□□□ 1.72
TSEN54-208ENST00000583173 PTPN18Q99952 460 aa25.78■■□□□ 1.72
TSEN54-208ENST00000583173 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.78■■□□□ 1.72
TSEN54-208ENST00000583173 CDC45O75419 566 aa25.77■■□□□ 1.72
TSEN54-208ENST00000583173 AKR1B1P15121 316 aa25.77■■□□□ 1.72
TSEN54-208ENST00000583173 GTF2A2P52657 109 aa25.77■■□□□ 1.72
TSEN54-208ENST00000583173 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.77■■□□□ 1.72
TSEN54-208ENST00000583173 TBC1D2Q9BYX2 928 aa25.77■■□□□ 1.72
TSEN54-208ENST00000583173 NBPF3Q9H094 633 aa25.77■■□□□ 1.72
TSEN54-208ENST00000583173 INCENPQ9NQS7 918 aa25.77■■□□□ 1.72
TSEN54-208ENST00000583173 CTDSPL2Q05D32 466 aa25.76■■□□□ 1.71
TSEN54-208ENST00000583173 SIAH1Q8IUQ4 282 aa25.76■■□□□ 1.71
TSEN54-208ENST00000583173 BRI3BPQ8WY22 251 aa25.76■■□□□ 1.71
TSEN54-208ENST00000583173 MAP4K1Q92918 833 aa25.76■■□□□ 1.71
TSEN54-208ENST00000583173 MAP2K1Q02750 393 aaPredicted RBP25.75■■□□□ 1.71
TSEN54-208ENST00000583173 STK11IPQ8N1F8 1099 aa25.75■■□□□ 1.71
TSEN54-208ENST00000583173 ZNF280CQ8ND82 737 aa25.75■■□□□ 1.71
TSEN54-208ENST00000583173 LSG1Q9H089 658 aaKnown RBP25.75■■□□□ 1.71
TSEN54-208ENST00000583173 SPP2Q13103 211 aa25.74■■□□□ 1.71
TSEN54-208ENST00000583173 SNAPC2Q13487 334 aa25.74■■□□□ 1.71
TSEN54-208ENST00000583173 CABP5Q9NP86 173 aa25.74■■□□□ 1.71
TSEN54-208ENST00000583173 DOCK1Q14185 1865 aa25.74■■□□□ 1.71
TSEN54-208ENST00000583173 PHIPQ8WWQ0 1821 aa25.73■■□□□ 1.71
TSEN54-208ENST00000583173 A0A0G2JLL6 359 aaPredicted RBP25.73■■□□□ 1.71
TSEN54-208ENST00000583173 CETPP11597 493 aa25.73■■□□□ 1.71
TSEN54-208ENST00000583173 PDE4BQ07343 736 aa25.73■■□□□ 1.71
TSEN54-208ENST00000583173 SREBF2Q12772 1141 aa25.73■■□□□ 1.71
TSEN54-208ENST00000583173 SEPT2Q15019 361 aa25.73■■□□□ 1.71
TSEN54-208ENST00000583173 TMEM179Q6ZVK1 233 aa25.73■■□□□ 1.71
TSEN54-208ENST00000583173 PRRT2Q7Z6L0 340 aaPredicted RBP25.73■■□□□ 1.71
TSEN54-208ENST00000583173 MKNK2Q9HBH9 465 aa25.73■■□□□ 1.71
TSEN54-208ENST00000583173 CTNNA3Q9UI47 895 aa25.73■■□□□ 1.71
TSEN54-208ENST00000583173 IGF2BP3O00425 579 aaKnown RBP eCLIP25.72■■□□□ 1.71
TSEN54-208ENST00000583173 ORC4O43929 436 aa25.72■■□□□ 1.71
TSEN54-208ENST00000583173 PRDM1O75626 825 aa25.72■■□□□ 1.71
TSEN54-208ENST00000583173 SLC3A2P08195 630 aaKnown RBP25.72■■□□□ 1.71
TSEN54-208ENST00000583173 SH3D19Q5HYK7 790 aa25.72■■□□□ 1.71
TSEN54-208ENST00000583173 IFNL1Q8IU54 200 aa25.72■■□□□ 1.71
TSEN54-208ENST00000583173 ZNF287Q9HBT7 754 aa25.72■■□□□ 1.71
TSEN54-208ENST00000583173 CCL15-CCL14A0A0B4J2E2 113 aa25.71■■□□□ 1.71
TSEN54-208ENST00000583173 IGKV6D-41A0A0C4DH26 115 aa25.71■■□□□ 1.71
TSEN54-208ENST00000583173 ZNF213O14771 459 aa25.71■■□□□ 1.71
TSEN54-208ENST00000583173 HAND2P61296 217 aa25.71■■□□□ 1.71
TSEN54-208ENST00000583173 CCL15Q16663 113 aa25.71■■□□□ 1.71
TSEN54-208ENST00000583173 GPAT2Q6NUI2 795 aa25.71■■□□□ 1.71
TSEN54-208ENST00000583173 ZNF444Q8N0Y2 327 aaPredicted RBP25.71■■□□□ 1.71
TSEN54-208ENST00000583173 AS3MTQ9HBK9 375 aa25.71■■□□□ 1.71
TSEN54-208ENST00000583173 RNF186Q9NXI6 227 aa25.71■■□□□ 1.71
TSEN54-208ENST00000583173 GTF3C3Q9Y5Q9 886 aa25.71■■□□□ 1.71
TSEN54-208ENST00000583173 LAMB1P07942 1786 aa25.71■■□□□ 1.71
TSEN54-208ENST00000583173 BACE1P56817 501 aa25.7■■□□□ 1.7
TSEN54-208ENST00000583173 RAB3GAP1Q15042 981 aa25.7■■□□□ 1.7
TSEN54-208ENST00000583173 AKNAD1Q5T1N1 836 aa25.7■■□□□ 1.7
TSEN54-208ENST00000583173 TBC1D10CQ8IV04 446 aa25.7■■□□□ 1.7
TSEN54-208ENST00000583173 NKX2-3Q8TAU0 364 aa25.7■■□□□ 1.7
TSEN54-208ENST00000583173 ACER1Q8TDN7 264 aa25.7■■□□□ 1.7
TSEN54-208ENST00000583173 STAG1Q8WVM7 1258 aa25.7■■□□□ 1.7
TSEN54-208ENST00000583173 A0A1W2PRG0 241 aa25.69■■□□□ 1.7
TSEN54-208ENST00000583173 TRIM75PA6NK02 468 aa25.69■■□□□ 1.7
TSEN54-208ENST00000583173 PCP11498 1178 aaKnown RBP25.69■■□□□ 1.7
TSEN54-208ENST00000583173 NEDD1Q8NHV4 660 aa25.69■■□□□ 1.7
TSEN54-208ENST00000583173 U3KPZ7 1027 aaPredicted RBP25.69■■□□□ 1.7
TSEN54-208ENST00000583173 BTBD19C9JJ37 291 aa25.68■■□□□ 1.7
TSEN54-208ENST00000583173 USP17L10C9JJH3 530 aa25.68■■□□□ 1.7
TSEN54-208ENST00000583173 MPHOSPH10O00566 681 aaKnown RBP25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms