RNA–Protein interactions for RNA: ENST00000582565.1

NCOR1-222, Transcript of nuclear receptor corepressor 1, human

TSL 4

Gene NCOR1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCOR1-222	ENST00000582565	ECE2	O60344	883 aa		13.46	□□□□□ -0.25
NCOR1-222	ENST00000582565	DKK1	O94907	266 aa		13.46	□□□□□ -0.25
NCOR1-222	ENST00000582565	RPS8	P62241	208 aa	Known RBP	13.46	□□□□□ -0.25
NCOR1-222	ENST00000582565	STK32A	Q8WU08	396 aa		13.46	□□□□□ -0.25
NCOR1-222	ENST00000582565	ZFP42	Q96MM3	310 aa		13.46	□□□□□ -0.25
NCOR1-222	ENST00000582565	ASTN2	O75129	1339 aa	Predicted RBP	13.45	□□□□□ -0.26
NCOR1-222	ENST00000582565	FAM155A	B1AL88	458 aa	Predicted RBP	13.45	□□□□□ -0.26
NCOR1-222	ENST00000582565	ADM5	C9JUS6	153 aa		13.45	□□□□□ -0.26
NCOR1-222	ENST00000582565	BACH1	O14867	736 aa		13.45	□□□□□ -0.26
NCOR1-222	ENST00000582565	WDR43	Q15061	677 aa	Known RBP eCLIP	13.45	□□□□□ -0.26
NCOR1-222	ENST00000582565	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.45	□□□□□ -0.26
NCOR1-222	ENST00000582565	JARID2	Q92833	1246 aa	Predicted RBP	13.45	□□□□□ -0.26
NCOR1-222	ENST00000582565	CCDC85C	A6NKD9	419 aa		13.44	□□□□□ -0.26
NCOR1-222	ENST00000582565	ELL2	O00472	640 aa	Predicted RBP	13.44	□□□□□ -0.26
NCOR1-222	ENST00000582565	VIL1	P09327	827 aa	Known RBP	13.44	□□□□□ -0.26
NCOR1-222	ENST00000582565	CTSO	P43234	321 aa	Predicted RBP	13.44	□□□□□ -0.26
NCOR1-222	ENST00000582565	HUNK	P57058	714 aa		13.44	□□□□□ -0.26
NCOR1-222	ENST00000582565	TLR1	Q15399	786 aa		13.44	□□□□□ -0.26
NCOR1-222	ENST00000582565	KRT26	Q7Z3Y9	468 aa		13.44	□□□□□ -0.26
NCOR1-222	ENST00000582565	PODXL2	Q9NZ53	605 aa		13.44	□□□□□ -0.26
NCOR1-222	ENST00000582565	LCE2B	O14633	110 aa		13.43	□□□□□ -0.26
NCOR1-222	ENST00000582565	CA12	O43570	354 aa		13.43	□□□□□ -0.26
NCOR1-222	ENST00000582565	RPS12	P25398	132 aa	Known RBP	13.43	□□□□□ -0.26
NCOR1-222	ENST00000582565	RGS19	P49795	217 aa		13.43	□□□□□ -0.26
NCOR1-222	ENST00000582565	C8orf58	Q8NAV2	365 aa		13.43	□□□□□ -0.26
NCOR1-222	ENST00000582565	MYD88	Q99836	296 aa		13.43	□□□□□ -0.26
NCOR1-222	ENST00000582565	MCOLN1	Q9GZU1	580 aa		13.43	□□□□□ -0.26
NCOR1-222	ENST00000582565	PSME4	Q14997	1843 aa		13.43	□□□□□ -0.26
NCOR1-222	ENST00000582565	WTIP	A6NIX2	430 aa	Predicted RBP	13.42	□□□□□ -0.26
NCOR1-222	ENST00000582565	APAF1	O14727	1248 aa		13.42	□□□□□ -0.26
NCOR1-222	ENST00000582565	PCCA	P05165	728 aa	Predicted RBP	13.42	□□□□□ -0.26
NCOR1-222	ENST00000582565	NOG	Q13253	232 aa		13.42	□□□□□ -0.26
NCOR1-222	ENST00000582565	EYA3	Q99504	573 aa		13.42	□□□□□ -0.26
NCOR1-222	ENST00000582565	GBA2	Q9HCG7	927 aa	Predicted RBP	13.42	□□□□□ -0.26
NCOR1-222	ENST00000582565	TTLL8	A6PVC2	850 aa		13.41	□□□□□ -0.26
NCOR1-222	ENST00000582565		M0R2N6	131 aa		13.41	□□□□□ -0.26
NCOR1-222	ENST00000582565	UFL1	O94874	794 aa		13.41	□□□□□ -0.26
NCOR1-222	ENST00000582565	CENPC	Q03188	943 aa		13.41	□□□□□ -0.26
NCOR1-222	ENST00000582565	KIF4B	Q2VIQ3	1234 aa		13.41	□□□□□ -0.26
NCOR1-222	ENST00000582565	RGMB	Q6NW40	437 aa		13.41	□□□□□ -0.26
NCOR1-222	ENST00000582565	TSEN2	Q8NCE0	465 aa	Known RBP	13.41	□□□□□ -0.26
NCOR1-222	ENST00000582565	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.41	□□□□□ -0.26
NCOR1-222	ENST00000582565	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.41	□□□□□ -0.26
NCOR1-222	ENST00000582565	IFT57	Q9NWB7	429 aa		13.41	□□□□□ -0.26
NCOR1-222	ENST00000582565	HRH3	Q9Y5N1	445 aa		13.41	□□□□□ -0.26
NCOR1-222	ENST00000582565	GPC1	P35052	558 aa		13.4	□□□□□ -0.26
NCOR1-222	ENST00000582565	RNF144A	P50876	292 aa	Predicted RBP	13.4	□□□□□ -0.26
NCOR1-222	ENST00000582565	SMTN	P53814	917 aa		13.4	□□□□□ -0.26
NCOR1-222	ENST00000582565	ZNF280A	P59817	542 aa	Predicted RBP	13.4	□□□□□ -0.26
NCOR1-222	ENST00000582565	TMEM164	Q5U3C3	297 aa		13.4	□□□□□ -0.26
NCOR1-222	ENST00000582565	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.4	□□□□□ -0.26
NCOR1-222	ENST00000582565	TSPYL6	Q8N831	410 aa		13.4	□□□□□ -0.26
NCOR1-222	ENST00000582565	RETREG2	Q8NC44	543 aa		13.4	□□□□□ -0.26
NCOR1-222	ENST00000582565	CCDC191	Q8NCU4	936 aa		13.4	□□□□□ -0.26
NCOR1-222	ENST00000582565	DCPS	Q96C86	337 aa	Known RBP	13.4	□□□□□ -0.26
NCOR1-222	ENST00000582565	GML	Q99445	158 aa		13.4	□□□□□ -0.26
NCOR1-222	ENST00000582565	METTL22	Q9BUU2	404 aa	Predicted RBP	13.4	□□□□□ -0.26
NCOR1-222	ENST00000582565	SENP2	Q9HC62	589 aa		13.4	□□□□□ -0.26
NCOR1-222	ENST00000582565	GGA3	Q9NZ52	723 aa		13.4	□□□□□ -0.26
NCOR1-222	ENST00000582565	GGA1	Q9UJY5	639 aa		13.4	□□□□□ -0.26
NCOR1-222	ENST00000582565	ZNF609	O15014	1411 aa		13.39	□□□□□ -0.27
NCOR1-222	ENST00000582565	ZNF646	O15015	1829 aa	Predicted RBP	13.39	□□□□□ -0.27
NCOR1-222	ENST00000582565	PDE8A	O60658	829 aa		13.39	□□□□□ -0.27
NCOR1-222	ENST00000582565	GNAI1	P63096	354 aa		13.39	□□□□□ -0.27
NCOR1-222	ENST00000582565	KIF23	Q02241	960 aa	Predicted RBP	13.39	□□□□□ -0.27
NCOR1-222	ENST00000582565	CDCA5	Q96FF9	252 aa		13.39	□□□□□ -0.27
NCOR1-222	ENST00000582565	CWC25	Q9NXE8	425 aa	Predicted RBP	13.39	□□□□□ -0.27
NCOR1-222	ENST00000582565	ANKIB1	Q9P2G1	1089 aa		13.39	□□□□□ -0.27
NCOR1-222	ENST00000582565	PDE4DIP	Q5VU43	2346 aa		13.38	□□□□□ -0.27
NCOR1-222	ENST00000582565	IGKV5-2	P06315	115 aa		13.38	□□□□□ -0.27
NCOR1-222	ENST00000582565	ZNF157	P51786	506 aa	Predicted RBP	13.38	□□□□□ -0.27
NCOR1-222	ENST00000582565	DGKZ	Q13574	1117 aa		13.38	□□□□□ -0.27
NCOR1-222	ENST00000582565	CCDC152	Q4G0S7	254 aa		13.38	□□□□□ -0.27
NCOR1-222	ENST00000582565	C2orf69	Q8N8R5	385 aa		13.38	□□□□□ -0.27
NCOR1-222	ENST00000582565	RNF217	Q8TC41	542 aa		13.38	□□□□□ -0.27
NCOR1-222	ENST00000582565	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.38	□□□□□ -0.27
NCOR1-222	ENST00000582565	HINFP	Q9BQA5	517 aa		13.38	□□□□□ -0.27
NCOR1-222	ENST00000582565	GMPR2	Q9P2T1	348 aa	Known RBP	13.38	□□□□□ -0.27
NCOR1-222	ENST00000582565	AKAP11	Q9UKA4	1901 aa		13.37	□□□□□ -0.27
NCOR1-222	ENST00000582565	SPEF2	Q9C093	1822 aa		13.37	□□□□□ -0.27
NCOR1-222	ENST00000582565		A6NJY4	79 aa		13.37	□□□□□ -0.27
NCOR1-222	ENST00000582565	MLLT1	Q03111	559 aa	Predicted RBP	13.37	□□□□□ -0.27
NCOR1-222	ENST00000582565	ANGEL2	Q5VTE6	544 aa	Known RBP	13.37	□□□□□ -0.27
NCOR1-222	ENST00000582565	AGBL3	Q8NEM8	1001 aa		13.37	□□□□□ -0.27
NCOR1-222	ENST00000582565	KIFC2	Q96AC6	838 aa		13.37	□□□□□ -0.27
NCOR1-222	ENST00000582565	CSRNP1	Q96S65	589 aa		13.37	□□□□□ -0.27
NCOR1-222	ENST00000582565	RNF186	Q9NXI6	227 aa		13.37	□□□□□ -0.27
NCOR1-222	ENST00000582565	SCAF8	Q9UPN6	1271 aa	Known RBP	13.37	□□□□□ -0.27
NCOR1-222	ENST00000582565	MAP3K2	Q9Y2U5	619 aa		13.37	□□□□□ -0.27
NCOR1-222	ENST00000582565	XDH	P47989	1333 aa		13.37	□□□□□ -0.27
NCOR1-222	ENST00000582565	MOB2	Q70IA6	237 aa		13.36	□□□□□ -0.27
NCOR1-222	ENST00000582565	ANKRD18A	Q8IVF6	992 aa		13.36	□□□□□ -0.27
NCOR1-222	ENST00000582565	TTLL11	Q8NHH1	800 aa		13.36	□□□□□ -0.27
NCOR1-222	ENST00000582565	MXD3	Q9BW11	206 aa		13.36	□□□□□ -0.27
NCOR1-222	ENST00000582565	MINPP1	Q9UNW1	487 aa		13.36	□□□□□ -0.27
NCOR1-222	ENST00000582565	MYH3	P11055	1940 aa		13.36	□□□□□ -0.27
NCOR1-222	ENST00000582565	PI4KAP2	A4QPH2	592 aa		13.35	□□□□□ -0.27
NCOR1-222	ENST00000582565	FIGNL2	A6NMB9	653 aa		13.35	□□□□□ -0.27
NCOR1-222	ENST00000582565	TRPA1	O75762	1119 aa		13.35	□□□□□ -0.27
NCOR1-222	ENST00000582565	HSP90B1	P14625	803 aa	Known RBP	13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms