RNA–Protein interactions for RNA: ENST00000582040.1

CCDC57-214, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 330 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-214ENST00000582040 MIGA1Q8NAN2 632 aa17.57■□□□□ 0.4
CCDC57-214ENST00000582040 ZBTB21Q9ULJ3 1066 aa17.57■□□□□ 0.4
CCDC57-214ENST00000582040 DOCK3Q8IZD9 2030 aa17.57■□□□□ 0.4
CCDC57-214ENST00000582040 MYH1P12882 1939 aa17.57■□□□□ 0.4
CCDC57-214ENST00000582040 IRX3P78415 501 aaPredicted RBP17.56■□□□□ 0.4
CCDC57-214ENST00000582040 METTL16Q86W50 562 aaKnown RBP17.56■□□□□ 0.4
CCDC57-214ENST00000582040 FOXP4Q8IVH2 680 aaPredicted RBP17.56■□□□□ 0.4
CCDC57-214ENST00000582040 PANK1Q8TE04 598 aa17.56■□□□□ 0.4
CCDC57-214ENST00000582040 DPF3Q92784 378 aa17.56■□□□□ 0.4
CCDC57-214ENST00000582040 HTATIP2Q9BUP3 242 aa17.56■□□□□ 0.4
CCDC57-214ENST00000582040 TMOD4Q9NZQ9 345 aa17.56■□□□□ 0.4
CCDC57-214ENST00000582040 TRIOBPQ9H2D6 2365 aa17.55■□□□□ 0.4
CCDC57-214ENST00000582040 SGPL1O95470 568 aa17.55■□□□□ 0.4
CCDC57-214ENST00000582040 FXR1P51114 621 aaKnown RBP eCLIP17.55■□□□□ 0.4
CCDC57-214ENST00000582040 AACSQ86V21 672 aa17.55■□□□□ 0.4
CCDC57-214ENST00000582040 MAGEB6Q8N7X4 407 aa17.55■□□□□ 0.4
CCDC57-214ENST00000582040 DEFB118Q96PH6 123 aa17.55■□□□□ 0.4
CCDC57-214ENST00000582040 MORF4L1Q9UBU8 362 aa17.55■□□□□ 0.4
CCDC57-214ENST00000582040 DDX60LQ5H9U9 1706 aaKnown RBP17.55■□□□□ 0.4
CCDC57-214ENST00000582040 DIEXFQ68CQ4 756 aaKnown RBP17.54■□□□□ 0.4
CCDC57-214ENST00000582040 CHRDL2Q6WN34 429 aa17.54■□□□□ 0.4
CCDC57-214ENST00000582040 ERC1Q8IUD2 1116 aa17.54■□□□□ 0.4
CCDC57-214ENST00000582040 ANTXR1Q9H6X2 564 aa17.54■□□□□ 0.4
CCDC57-214ENST00000582040 PAK6Q9NQU5 681 aaPredicted RBP17.54■□□□□ 0.4
CCDC57-214ENST00000582040 GINM1Q9NU53 330 aa17.54■□□□□ 0.4
CCDC57-214ENST00000582040 PLXNB2O15031 1838 aa17.54■□□□□ 0.4
CCDC57-214ENST00000582040 NAV1Q8NEY1 1877 aa17.53■□□□□ 0.4
CCDC57-214ENST00000582040 USP17L10C9JJH3 530 aa17.53■□□□□ 0.4
CCDC57-214ENST00000582040 USP5P45974 858 aa17.53■□□□□ 0.4
CCDC57-214ENST00000582040 CERS3Q8IU89 383 aa17.53■□□□□ 0.4
CCDC57-214ENST00000582040 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.53■□□□□ 0.4
CCDC57-214ENST00000582040 IL1RAPL2Q9NP60 686 aa17.53■□□□□ 0.4
CCDC57-214ENST00000582040 C19orf81C9J6K1 198 aa17.52■□□□□ 0.4
CCDC57-214ENST00000582040 PEX10O60683 326 aa17.52■□□□□ 0.4
CCDC57-214ENST00000582040 HMGCRP04035 888 aa17.52■□□□□ 0.4
CCDC57-214ENST00000582040 HOXA7P31268 230 aaPredicted RBP17.52■□□□□ 0.4
CCDC57-214ENST00000582040 HERVK_113P62684 666 aa17.52■□□□□ 0.4
CCDC57-214ENST00000582040 MAP3K12Q12852 859 aa17.52■□□□□ 0.4
CCDC57-214ENST00000582040 P2RX7Q99572 595 aaKnown RBP17.52■□□□□ 0.4
CCDC57-214ENST00000582040 GH2P01242 217 aa17.51■□□□□ 0.39
CCDC57-214ENST00000582040 TFRCP02786 760 aaKnown RBP17.51■□□□□ 0.39
CCDC57-214ENST00000582040 TXNRD2Q9NNW7 524 aa17.51■□□□□ 0.39
CCDC57-214ENST00000582040 GJD2Q9UKL4 321 aa17.51■□□□□ 0.39
CCDC57-214ENST00000582040 TRIM32Q13049 653 aa17.5■□□□□ 0.39
CCDC57-214ENST00000582040 HSP90AB4PQ58FF6 505 aa17.5■□□□□ 0.39
CCDC57-214ENST00000582040 RHPN1Q8TCX5 695 aa17.5■□□□□ 0.39
CCDC57-214ENST00000582040 FEZ1Q99689 392 aa17.5■□□□□ 0.39
CCDC57-214ENST00000582040 CRISPLD2Q9H0B8 497 aa17.5■□□□□ 0.39
CCDC57-214ENST00000582040 EHD4Q9H223 541 aa17.5■□□□□ 0.39
CCDC57-214ENST00000582040 SERPINB13Q9UIV8 391 aa17.5■□□□□ 0.39
CCDC57-214ENST00000582040 NR2E3Q9Y5X4 410 aa17.5■□□□□ 0.39
CCDC57-214ENST00000582040 APBB1O00213 710 aa17.49■□□□□ 0.39
CCDC57-214ENST00000582040 CAPN2P17655 700 aa17.49■□□□□ 0.39
CCDC57-214ENST00000582040 ZYXQ15942 572 aaKnown RBP17.49■□□□□ 0.39
CCDC57-214ENST00000582040 TATDN1Q6P1N9 297 aa17.49■□□□□ 0.39
CCDC57-214ENST00000582040 TMED8Q6PL24 325 aaPredicted RBP17.49■□□□□ 0.39
CCDC57-214ENST00000582040 USP17L2Q6R6M4 530 aa17.49■□□□□ 0.39
CCDC57-214ENST00000582040 TTC6Q86TZ1 520 aa17.49■□□□□ 0.39
CCDC57-214ENST00000582040 GPRC5AQ8NFJ5 357 aa17.49■□□□□ 0.39
CCDC57-214ENST00000582040 TRIB2Q92519 343 aa17.49■□□□□ 0.39
CCDC57-214ENST00000582040 RIOK1Q9BRS2 568 aaKnown RBP17.49■□□□□ 0.39
CCDC57-214ENST00000582040 PAGR1Q9BTK6 254 aa17.49■□□□□ 0.39
CCDC57-214ENST00000582040 EMILIN3Q9NT22 766 aa17.49■□□□□ 0.39
CCDC57-214ENST00000582040 ALPK3Q96L96 1907 aa17.49■□□□□ 0.39
CCDC57-214ENST00000582040 ERVK-9P63128 1117 aa17.48■□□□□ 0.39
CCDC57-214ENST00000582040 ERVK-24P63145 666 aa17.48■□□□□ 0.39
CCDC57-214ENST00000582040 DIS3LQ8TF46 1054 aaKnown RBP17.48■□□□□ 0.39
CCDC57-214ENST00000582040 SOCS4Q8WXH5 440 aa17.48■□□□□ 0.39
CCDC57-214ENST00000582040 PAWRQ96IZ0 340 aaKnown RBP17.48■□□□□ 0.39
CCDC57-214ENST00000582040 RBPJLQ9UBG7 517 aa17.48■□□□□ 0.39
CCDC57-214ENST00000582040 MAGEB6P1A0A0J9YX57 407 aa17.47■□□□□ 0.39
CCDC57-214ENST00000582040 MS4A1P11836 297 aa17.47■□□□□ 0.39
CCDC57-214ENST00000582040 PDE6AP16499 860 aa17.47■□□□□ 0.39
CCDC57-214ENST00000582040 CYP2B6P20813 491 aa17.47■□□□□ 0.39
CCDC57-214ENST00000582040 RAB3GAP1Q15042 981 aa17.47■□□□□ 0.39
CCDC57-214ENST00000582040 TTF1Q15361 905 aaPredicted RBP17.47■□□□□ 0.39
CCDC57-214ENST00000582040 CLASRPQ8N2M8 674 aaKnown RBP17.47■□□□□ 0.39
CCDC57-214ENST00000582040 GTF3C2Q8WUA4 911 aaPredicted RBP17.47■□□□□ 0.39
CCDC57-214ENST00000582040 KIF1BPQ96EK5 621 aa17.47■□□□□ 0.39
CCDC57-214ENST00000582040 C12orf42Q96LP6 360 aa17.47■□□□□ 0.39
CCDC57-214ENST00000582040 DNAJC2Q99543 621 aaKnown RBP17.47■□□□□ 0.39
CCDC57-214ENST00000582040 NUDT12Q9BQG2 462 aa17.47■□□□□ 0.39
CCDC57-214ENST00000582040 PORCNQ9H237 461 aa17.47■□□□□ 0.39
CCDC57-214ENST00000582040 HMX1Q9NP08 348 aaPredicted RBP17.47■□□□□ 0.39
CCDC57-214ENST00000582040 RBM27Q9P2N5 1060 aaKnown RBP17.47■□□□□ 0.39
CCDC57-214ENST00000582040 RPTORQ8N122 1335 aa17.47■□□□□ 0.39
CCDC57-214ENST00000582040 EVI5O60447 810 aa17.46■□□□□ 0.39
CCDC57-214ENST00000582040 HMMRO75330 724 aa17.46■□□□□ 0.39
CCDC57-214ENST00000582040 MAPK4P31152 587 aa17.46■□□□□ 0.39
CCDC57-214ENST00000582040 PLCD1P51178 756 aa17.46■□□□□ 0.39
CCDC57-214ENST00000582040 PDE3AQ14432 1141 aa17.46■□□□□ 0.39
CCDC57-214ENST00000582040 ABCB5Q2M3G0 1257 aa17.46■□□□□ 0.39
CCDC57-214ENST00000582040 CERKLQ49MI3 558 aaPredicted RBP17.46■□□□□ 0.39
CCDC57-214ENST00000582040 SLC9C2Q5TAH2 1124 aa17.46■□□□□ 0.39
CCDC57-214ENST00000582040 POTEEQ6S8J3 1075 aa17.46■□□□□ 0.39
CCDC57-214ENST00000582040 CRNKL1Q9BZJ0 848 aaKnown RBP17.46■□□□□ 0.39
CCDC57-214ENST00000582040 BCL11AQ9H165 835 aa17.46■□□□□ 0.39
CCDC57-214ENST00000582040 DDX19BQ9UMR2 479 aa17.46■□□□□ 0.39
CCDC57-214ENST00000582040 COG6Q9Y2V7 657 aa17.46■□□□□ 0.39
CCDC57-214ENST00000582040 GOLIM4O00461 696 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms