RNA–Protein interactions for RNA: ENST00000581709.1

RTTN-208, Transcript of rotatin, humanhuman

TSL 3

Gene RTTN, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-208ENST00000581709 ANAPC4Q9UJX5 808 aa10.61□□□□□ -0.71
RTTN-208ENST00000581709 SNCAIPQ9Y6H5 919 aa10.61□□□□□ -0.71
RTTN-208ENST00000581709 U3KPZ7 1027 aaPredicted RBP10.61□□□□□ -0.71
RTTN-208ENST00000581709 ZMYM6O95789 1325 aa10.6□□□□□ -0.71
RTTN-208ENST00000581709 FAM155AB1AL88 458 aaPredicted RBP10.6□□□□□ -0.71
RTTN-208ENST00000581709 CXCL11O14625 94 aa10.6□□□□□ -0.71
RTTN-208ENST00000581709 GDF11O95390 407 aa10.6□□□□□ -0.71
RTTN-208ENST00000581709 GH2P01242 217 aa10.6□□□□□ -0.71
RTTN-208ENST00000581709 GTF2A2P52657 109 aa10.6□□□□□ -0.71
RTTN-208ENST00000581709 KIF23Q02241 960 aaPredicted RBP10.6□□□□□ -0.71
RTTN-208ENST00000581709 EVX2Q03828 476 aa10.6□□□□□ -0.71
RTTN-208ENST00000581709 CTDSPL2Q05D32 466 aa10.6□□□□□ -0.71
RTTN-208ENST00000581709 MKRN3Q13064 507 aaKnown RBP10.6□□□□□ -0.71
RTTN-208ENST00000581709 RRP1BQ14684 758 aaKnown RBP10.6□□□□□ -0.71
RTTN-208ENST00000581709 RAB3GAP1Q15042 981 aa10.6□□□□□ -0.71
RTTN-208ENST00000581709 MFSD6Q6ZSS7 791 aa10.6□□□□□ -0.71
RTTN-208ENST00000581709 RASAL3Q86YV0 1011 aa10.6□□□□□ -0.71
RTTN-208ENST00000581709 SLC44A5Q8NCS7 719 aa10.6□□□□□ -0.71
RTTN-208ENST00000581709 MAP4K1Q92918 833 aa10.6□□□□□ -0.71
RTTN-208ENST00000581709 WNK4Q96J92 1243 aa10.6□□□□□ -0.71
RTTN-208ENST00000581709 IL25Q9H293 177 aa10.6□□□□□ -0.71
RTTN-208ENST00000581709 RNF41Q9H4P4 317 aaPredicted RBP10.6□□□□□ -0.71
RTTN-208ENST00000581709 ANO2Q9NQ90 1003 aa10.6□□□□□ -0.71
RTTN-208ENST00000581709 DOCK2Q92608 1830 aa10.6□□□□□ -0.71
RTTN-208ENST00000581709 MAST2Q6P0Q8 1798 aa10.6□□□□□ -0.71
RTTN-208ENST00000581709 MANSC4A6NHS7 340 aaPredicted RBP10.59□□□□□ -0.71
RTTN-208ENST00000581709 SMIM22K7EJ46 135 aa10.59□□□□□ -0.71
RTTN-208ENST00000581709 IRF6O14896 467 aa10.59□□□□□ -0.71
RTTN-208ENST00000581709 AOC2O75106 756 aa10.59□□□□□ -0.71
RTTN-208ENST00000581709 REC8O95072 547 aa10.59□□□□□ -0.71
RTTN-208ENST00000581709 PCP11498 1178 aaKnown RBP10.59□□□□□ -0.71
RTTN-208ENST00000581709 CETPP11597 493 aa10.59□□□□□ -0.71
RTTN-208ENST00000581709 HAND2P61296 217 aa10.59□□□□□ -0.71
RTTN-208ENST00000581709 MAP2K1Q02750 393 aaPredicted RBP10.59□□□□□ -0.71
RTTN-208ENST00000581709 PTH1RQ03431 593 aa10.59□□□□□ -0.71
RTTN-208ENST00000581709 SREBF2Q12772 1141 aa10.59□□□□□ -0.71
RTTN-208ENST00000581709 PPIL2Q13356 520 aa10.59□□□□□ -0.71
RTTN-208ENST00000581709 SNAPC2Q13487 334 aa10.59□□□□□ -0.71
RTTN-208ENST00000581709 OTUD7BQ6GQQ9 843 aa10.59□□□□□ -0.71
RTTN-208ENST00000581709 TMEM179Q6ZVK1 233 aa10.59□□□□□ -0.71
RTTN-208ENST00000581709 ZNF280CQ8ND82 737 aa10.59□□□□□ -0.71
RTTN-208ENST00000581709 TOMM22Q9NS69 142 aa10.59□□□□□ -0.71
RTTN-208ENST00000581709 ZBTB21Q9ULJ3 1066 aa10.59□□□□□ -0.71
RTTN-208ENST00000581709 AFG3L2Q9Y4W6 797 aa10.59□□□□□ -0.71
RTTN-208ENST00000581709 POLR2AP24928 1970 aaKnown RBP10.59□□□□□ -0.71
RTTN-208ENST00000581709 RANBP6O60518 1105 aaKnown RBP10.58□□□□□ -0.72
RTTN-208ENST00000581709 PRDM1O75626 825 aa10.58□□□□□ -0.72
RTTN-208ENST00000581709 TSPY3P0CV98 308 aa10.58□□□□□ -0.72
RTTN-208ENST00000581709 TSPY8P0CW00 308 aa10.58□□□□□ -0.72
RTTN-208ENST00000581709 ATXN8OSP0DMR3 200 aa10.58□□□□□ -0.72
RTTN-208ENST00000581709 NT5C2P49902 561 aa10.58□□□□□ -0.72
RTTN-208ENST00000581709 JAG1P78504 1218 aa10.58□□□□□ -0.72
RTTN-208ENST00000581709 TRDNQ13061 729 aa10.58□□□□□ -0.72
RTTN-208ENST00000581709 SPP2Q13103 211 aa10.58□□□□□ -0.72
RTTN-208ENST00000581709 PPP4R3BQ5MIZ7 849 aa10.58□□□□□ -0.72
RTTN-208ENST00000581709 AKNAD1Q5T1N1 836 aa10.58□□□□□ -0.72
RTTN-208ENST00000581709 FASTKD5Q7L8L6 764 aaKnown RBP10.58□□□□□ -0.72
RTTN-208ENST00000581709 BEGAINQ9BUH8 593 aa10.58□□□□□ -0.72
RTTN-208ENST00000581709 WDR18Q9BV38 432 aa10.58□□□□□ -0.72
RTTN-208ENST00000581709 LSG1Q9H089 658 aaKnown RBP10.58□□□□□ -0.72
RTTN-208ENST00000581709 KANSL2Q9H9L4 492 aa10.58□□□□□ -0.72
RTTN-208ENST00000581709 PAPPA2Q9BXP8 1791 aa10.57□□□□□ -0.72
RTTN-208ENST00000581709 TRIM75PA6NK02 468 aa10.57□□□□□ -0.72
RTTN-208ENST00000581709 TSPY2A6NKD2 308 aa10.57□□□□□ -0.72
RTTN-208ENST00000581709 C19orf81C9J6K1 198 aa10.57□□□□□ -0.72
RTTN-208ENST00000581709 USP17L10C9JJH3 530 aa10.57□□□□□ -0.72
RTTN-208ENST00000581709 ORC4O43929 436 aa10.57□□□□□ -0.72
RTTN-208ENST00000581709 FGRP09769 529 aa10.57□□□□□ -0.72
RTTN-208ENST00000581709 AKR1B1P15121 316 aa10.57□□□□□ -0.72
RTTN-208ENST00000581709 RASA1P20936 1047 aa10.57□□□□□ -0.72
RTTN-208ENST00000581709 GJA5P36382 358 aa10.57□□□□□ -0.72
RTTN-208ENST00000581709 TM4SF4P48230 202 aa10.57□□□□□ -0.72
RTTN-208ENST00000581709 TFAP4Q01664 338 aa10.57□□□□□ -0.72
RTTN-208ENST00000581709 SEPT2Q15019 361 aa10.57□□□□□ -0.72
RTTN-208ENST00000581709 RRP12Q5JTH9 1297 aaKnown RBP10.57□□□□□ -0.72
RTTN-208ENST00000581709 RNF20Q5VTR2 975 aa10.57□□□□□ -0.72
RTTN-208ENST00000581709 STAG1Q8WVM7 1258 aa10.57□□□□□ -0.72
RTTN-208ENST00000581709 MS4A4AQ96JQ5 239 aa10.57□□□□□ -0.72
RTTN-208ENST00000581709 KRT23Q9C075 422 aa10.57□□□□□ -0.72
RTTN-208ENST00000581709 CNNM2Q9H8M5 875 aa10.57□□□□□ -0.72
RTTN-208ENST00000581709 INCENPQ9NQS7 918 aa10.57□□□□□ -0.72
RTTN-208ENST00000581709 KCNH4Q9UQ05 1017 aa10.57□□□□□ -0.72
RTTN-208ENST00000581709 RBM8AQ9Y5S9 174 aaKnown RBP10.57□□□□□ -0.72
RTTN-208ENST00000581709 MYO5AQ9Y4I1 1855 aaKnown RBP10.57□□□□□ -0.72
RTTN-208ENST00000581709 ECM29Q5VYK3 1845 aa10.56□□□□□ -0.72
RTTN-208ENST00000581709 ROBO3Q96MS0 1386 aa10.56□□□□□ -0.72
RTTN-208ENST00000581709 CCL15-CCL14A0A0B4J2E2 113 aa10.56□□□□□ -0.72
RTTN-208ENST00000581709 TESPA1A2RU30 521 aaPredicted RBP10.56□□□□□ -0.72
RTTN-208ENST00000581709 ALDH1A1P00352 501 aa10.56□□□□□ -0.72
RTTN-208ENST00000581709 USP14P54578 494 aa10.56□□□□□ -0.72
RTTN-208ENST00000581709 BACE1P56817 501 aa10.56□□□□□ -0.72
RTTN-208ENST00000581709 CCL15Q16663 113 aa10.56□□□□□ -0.72
RTTN-208ENST00000581709 FAM47AQ5JRC9 791 aa10.56□□□□□ -0.72
RTTN-208ENST00000581709 NEDD1Q8NHV4 660 aa10.56□□□□□ -0.72
RTTN-208ENST00000581709 ESR2Q92731 530 aa10.56□□□□□ -0.72
RTTN-208ENST00000581709 ZIC5Q96T25 663 aa10.56□□□□□ -0.72
RTTN-208ENST00000581709 SH2D4AQ9H788 454 aa10.56□□□□□ -0.72
RTTN-208ENST00000581709 ARHGEF10LQ9HCE6 1279 aa10.56□□□□□ -0.72
RTTN-208ENST00000581709 TMOD4Q9NZQ9 345 aa10.56□□□□□ -0.72
RTTN-208ENST00000581709 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms