RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 PLPPR2Q96GM1 343 aa7.12□□□□□ -1.27
SMCHD1-206ENST00000581631 WNT10AQ9GZT5 417 aa7.12□□□□□ -1.27
SMCHD1-206ENST00000581631 PICK1Q9NRD5 415 aa7.12□□□□□ -1.27
SMCHD1-206ENST00000581631 FGD1P98174 961 aa7.11□□□□□ -1.27
SMCHD1-206ENST00000581631 TMEM67Q5HYA8 995 aa7.11□□□□□ -1.27
SMCHD1-206ENST00000581631 CDKAL1Q5VV42 579 aa7.11□□□□□ -1.27
SMCHD1-206ENST00000581631 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.11□□□□□ -1.27
SMCHD1-206ENST00000581631 MFSD2AQ8NA29 543 aa7.11□□□□□ -1.27
SMCHD1-206ENST00000581631 MIPEPQ99797 713 aa7.11□□□□□ -1.27
SMCHD1-206ENST00000581631 H3BS24 57 aa7.1□□□□□ -1.27
SMCHD1-206ENST00000581631 GIPC1O14908 333 aa7.1□□□□□ -1.27
SMCHD1-206ENST00000581631 MAPK1P28482 360 aa7.1□□□□□ -1.27
SMCHD1-206ENST00000581631 CDK8P49336 464 aa7.1□□□□□ -1.27
SMCHD1-206ENST00000581631 PRAMEF27A3QJZ7 478 aa7.09□□□□□ -1.27
SMCHD1-206ENST00000581631 LCE5AQ5TCM9 118 aa7.09□□□□□ -1.27
SMCHD1-206ENST00000581631 MPZL3Q6UWV2 235 aa7.09□□□□□ -1.27
SMCHD1-206ENST00000581631 FBXO15Q8NCQ5 510 aaPredicted RBP7.09□□□□□ -1.27
SMCHD1-206ENST00000581631 ZSCAN18Q8TBC5 510 aaPredicted RBP7.09□□□□□ -1.27
SMCHD1-206ENST00000581631 ALPK1Q96QP1 1244 aa7.09□□□□□ -1.27
SMCHD1-206ENST00000581631 CD320Q9NPF0 282 aa7.09□□□□□ -1.27
SMCHD1-206ENST00000581631 WWC3Q9ULE0 1092 aa7.09□□□□□ -1.27
SMCHD1-206ENST00000581631 TPX2Q9ULW0 747 aaKnown RBP7.09□□□□□ -1.27
SMCHD1-206ENST00000581631 FAM155AB1AL88 458 aaPredicted RBP7.08□□□□□ -1.28
SMCHD1-206ENST00000581631 CST3P01034 146 aaPredicted RBP7.08□□□□□ -1.28
SMCHD1-206ENST00000581631 LETMD1Q6P1Q0 360 aa7.08□□□□□ -1.28
SMCHD1-206ENST00000581631 ANKLE2Q86XL3 938 aa7.08□□□□□ -1.28
SMCHD1-206ENST00000581631 KRTAP4-5Q9BYR2 181 aa7.08□□□□□ -1.28
SMCHD1-206ENST00000581631 C12orf49Q9H741 205 aa7.08□□□□□ -1.28
SMCHD1-206ENST00000581631 BIN2Q9UBW5 565 aaPredicted RBP7.08□□□□□ -1.28
SMCHD1-206ENST00000581631 SNCAIPQ9Y6H5 919 aa7.08□□□□□ -1.28
SMCHD1-206ENST00000581631 ESR1P03372 595 aa7.07□□□□□ -1.28
SMCHD1-206ENST00000581631 MED14OSP0DP75 135 aa7.07□□□□□ -1.28
SMCHD1-206ENST00000581631 ZSCAN22P10073 491 aaPredicted RBP7.07□□□□□ -1.28
SMCHD1-206ENST00000581631 WIPI1Q5MNZ9 446 aaPredicted RBP7.07□□□□□ -1.28
SMCHD1-206ENST00000581631 PRAMEF13Q5VWM6 474 aa7.07□□□□□ -1.28
SMCHD1-206ENST00000581631 HDXQ7Z353 690 aa7.07□□□□□ -1.28
SMCHD1-206ENST00000581631 AMIGO3Q86WK7 504 aa7.07□□□□□ -1.28
SMCHD1-206ENST00000581631 HID1Q8IV36 788 aa7.07□□□□□ -1.28
SMCHD1-206ENST00000581631 NSUN3Q9H649 340 aaKnown RBP7.07□□□□□ -1.28
SMCHD1-206ENST00000581631 KCNK12Q9HB15 430 aa7.07□□□□□ -1.28
SMCHD1-206ENST00000581631 RAPGEFL1Q9UHV5 662 aa7.07□□□□□ -1.28
SMCHD1-206ENST00000581631 USP17L7P0C7H9 530 aa7.06□□□□□ -1.28
SMCHD1-206ENST00000581631 MAPK8P45983 427 aa7.06□□□□□ -1.28
SMCHD1-206ENST00000581631 TNK2Q07912 1038 aa7.06□□□□□ -1.28
SMCHD1-206ENST00000581631 ALG1LQ6GMV1 187 aa7.06□□□□□ -1.28
SMCHD1-206ENST00000581631 TTLL10Q6ZVT0 673 aa7.06□□□□□ -1.28
SMCHD1-206ENST00000581631 SV2BQ7L1I2 683 aa7.06□□□□□ -1.28
SMCHD1-206ENST00000581631 UBE2FQ969M7 185 aa7.06□□□□□ -1.28
SMCHD1-206ENST00000581631 CCDC120Q96HB5 630 aa7.06□□□□□ -1.28
SMCHD1-206ENST00000581631 COX4I2Q96KJ9 171 aa7.06□□□□□ -1.28
SMCHD1-206ENST00000581631 DIRC2Q96SL1 478 aa7.06□□□□□ -1.28
SMCHD1-206ENST00000581631 KRTAP9-3Q9BYQ3 159 aa7.06□□□□□ -1.28
SMCHD1-206ENST00000581631 SP110Q9HB58 689 aa7.06□□□□□ -1.28
SMCHD1-206ENST00000581631 FAM8A1Q9UBU6 413 aa7.06□□□□□ -1.28
SMCHD1-206ENST00000581631 DNAJC25-GNG10A0A024R161 153 aa7.05□□□□□ -1.28
SMCHD1-206ENST00000581631 GFRA2O00451 464 aa7.05□□□□□ -1.28
SMCHD1-206ENST00000581631 KIR3DL1P43629 444 aa7.05□□□□□ -1.28
SMCHD1-206ENST00000581631 PDE4CQ08493 712 aa7.05□□□□□ -1.28
SMCHD1-206ENST00000581631 RALGPS1Q5JS13 557 aa7.05□□□□□ -1.28
SMCHD1-206ENST00000581631 ZNF746Q6NUN9 644 aaPredicted RBP7.05□□□□□ -1.28
SMCHD1-206ENST00000581631 LILRA6Q6PI73 481 aa7.05□□□□□ -1.28
SMCHD1-206ENST00000581631 NFIBO00712 420 aa7.04□□□□□ -1.28
SMCHD1-206ENST00000581631 CBX7O95931 251 aa7.04□□□□□ -1.28
SMCHD1-206ENST00000581631 HPXP02790 462 aa7.04□□□□□ -1.28
SMCHD1-206ENST00000581631 ERVFC1P60507 584 aa7.04□□□□□ -1.28
SMCHD1-206ENST00000581631 ASB16Q96NS5 453 aa7.04□□□□□ -1.28
SMCHD1-206ENST00000581631 SLAMF8Q9P0V8 285 aa7.04□□□□□ -1.28
SMCHD1-206ENST00000581631 TACC3Q9Y6A5 838 aa7.04□□□□□ -1.28
SMCHD1-206ENST00000581631 NCANO14594 1321 aa7.03□□□□□ -1.28
SMCHD1-206ENST00000581631 GLDCP23378 1020 aa7.03□□□□□ -1.28
SMCHD1-206ENST00000581631 GRK4P32298 578 aa7.03□□□□□ -1.28
SMCHD1-206ENST00000581631 ETF1P62495 437 aaKnown RBP7.03□□□□□ -1.28
SMCHD1-206ENST00000581631 TMPRSS7Q7RTY8 843 aa7.03□□□□□ -1.28
SMCHD1-206ENST00000581631 TTC6Q86TZ1 520 aa7.03□□□□□ -1.28
SMCHD1-206ENST00000581631 MRPL41Q8IXM3 137 aaKnown RBP7.03□□□□□ -1.28
SMCHD1-206ENST00000581631 ABHD4Q8TB40 342 aa7.03□□□□□ -1.28
SMCHD1-206ENST00000581631 Q96M66 194 aa7.03□□□□□ -1.28
SMCHD1-206ENST00000581631 ZSWIM5Q9P217 1185 aa7.03□□□□□ -1.28
SMCHD1-206ENST00000581631 TJP2Q9UDY2 1190 aa7.03□□□□□ -1.28
SMCHD1-206ENST00000581631 TMEM59LQ9UK28 342 aa7.03□□□□□ -1.28
SMCHD1-206ENST00000581631 WASH4PA8MWX3 477 aa7.02□□□□□ -1.29
SMCHD1-206ENST00000581631 NPIPB6E9PJ23 425 aa7.02□□□□□ -1.29
SMCHD1-206ENST00000581631 BRD1O95696 1058 aa7.02□□□□□ -1.29
SMCHD1-206ENST00000581631 SRFP11831 508 aa7.02□□□□□ -1.29
SMCHD1-206ENST00000581631 GAB4Q2WGN9 574 aa7.02□□□□□ -1.29
SMCHD1-206ENST00000581631 TTBK2Q6IQ55 1244 aa7.02□□□□□ -1.29
SMCHD1-206ENST00000581631 DNAJB8Q8NHS0 232 aa7.02□□□□□ -1.29
SMCHD1-206ENST00000581631 PIWIL2Q8TC59 973 aaKnown RBP7.02□□□□□ -1.29
SMCHD1-206ENST00000581631 EPB41L4BQ9H329 900 aa7.02□□□□□ -1.29
SMCHD1-206ENST00000581631 SPG7Q9UQ90 795 aa7.02□□□□□ -1.29
SMCHD1-206ENST00000581631 RPS26P62854 115 aaKnown RBP7.01□□□□□ -1.29
SMCHD1-206ENST00000581631 KCNA10Q16322 511 aa7.01□□□□□ -1.29
SMCHD1-206ENST00000581631 C14orf37Q86TY3 774 aa7.01□□□□□ -1.29
SMCHD1-206ENST00000581631 CDH24Q86UP0 819 aa7.01□□□□□ -1.29
SMCHD1-206ENST00000581631 XAGE3Q8WTP9 111 aa7.01□□□□□ -1.29
SMCHD1-206ENST00000581631 DUSP15Q9H1R2 295 aaPredicted RBP7.01□□□□□ -1.29
SMCHD1-206ENST00000581631 DCP1AQ9NPI6 582 aaPredicted RBP7.01□□□□□ -1.29
SMCHD1-206ENST00000581631 PCDHB5Q9Y5E4 795 aa7.01□□□□□ -1.29
SMCHD1-206ENST00000581631 ETV2O00321 342 aaPredicted RBP7□□□□□ -1.29
SMCHD1-206ENST00000581631 SEPT6Q14141 434 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms