RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 MROH5Q6ZUA9 1318 aa17.75■□□□□ 0.43
CSNK1D-213ENST00000580446 KBTBD13C9JR72 458 aa17.75■□□□□ 0.43
CSNK1D-213ENST00000580446 RAG1P15918 1043 aa17.75■□□□□ 0.43
CSNK1D-213ENST00000580446 ERVK-9P63128 1117 aa17.75■□□□□ 0.43
CSNK1D-213ENST00000580446 ERVK-24P63145 666 aa17.75■□□□□ 0.43
CSNK1D-213ENST00000580446 MAP3K10Q02779 954 aa17.75■□□□□ 0.43
CSNK1D-213ENST00000580446 MAP2K5Q13163 448 aa17.75■□□□□ 0.43
CSNK1D-213ENST00000580446 SNX17Q15036 470 aa17.75■□□□□ 0.43
CSNK1D-213ENST00000580446 SKIV2LQ15477 1246 aaKnown RBP17.75■□□□□ 0.43
CSNK1D-213ENST00000580446 EDC3Q96F86 508 aaKnown RBP17.75■□□□□ 0.43
CSNK1D-213ENST00000580446 ADAMTS8Q9UP79 889 aa17.75■□□□□ 0.43
CSNK1D-213ENST00000580446 REV3LO60673 3130 aa17.75■□□□□ 0.43
CSNK1D-213ENST00000580446 RFX7Q2KHR2 1363 aa17.75■□□□□ 0.43
CSNK1D-213ENST00000580446 PQBP1O60828 265 aaKnown RBP17.74■□□□□ 0.43
CSNK1D-213ENST00000580446 ENTPD3O75355 529 aa17.74■□□□□ 0.43
CSNK1D-213ENST00000580446 SHROOM1Q2M3G4 852 aaPredicted RBP17.74■□□□□ 0.43
CSNK1D-213ENST00000580446 NPLOC4Q8TAT6 608 aa17.74■□□□□ 0.43
CSNK1D-213ENST00000580446 KLHDC4Q8TBB5 520 aa17.74■□□□□ 0.43
CSNK1D-213ENST00000580446 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.74■□□□□ 0.432e-8■■■□□ 16.2
CSNK1D-213ENST00000580446 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.74■□□□□ 0.433e-7■■■■■ 28.9
CSNK1D-213ENST00000580446 CLTBP09497 229 aa17.73■□□□□ 0.43
CSNK1D-213ENST00000580446 ATP2B2Q01814 1243 aa17.73■□□□□ 0.43
CSNK1D-213ENST00000580446 VGLL2Q8N8G2 317 aa17.73■□□□□ 0.43
CSNK1D-213ENST00000580446 SUCLG2Q96I99 432 aa17.73■□□□□ 0.43
CSNK1D-213ENST00000580446 NKX2-4Q9H2Z4 354 aa17.73■□□□□ 0.43
CSNK1D-213ENST00000580446 UTYO14607 1347 aa17.72■□□□□ 0.43
CSNK1D-213ENST00000580446 LDHBP07195 334 aaKnown RBP17.72■□□□□ 0.43
CSNK1D-213ENST00000580446 BEND3Q5T5X7 828 aa17.72■□□□□ 0.43
CSNK1D-213ENST00000580446 WDR66Q8TBY9 1149 aa17.72■□□□□ 0.43
CSNK1D-213ENST00000580446 IDI2Q9BXS1 227 aa17.72■□□□□ 0.43
CSNK1D-213ENST00000580446 RLFQ13129 1914 aa17.72■□□□□ 0.43
CSNK1D-213ENST00000580446 GRM8O00222 908 aa17.71■□□□□ 0.43
CSNK1D-213ENST00000580446 APAF1O14727 1248 aa17.71■□□□□ 0.43
CSNK1D-213ENST00000580446 MSCO60682 206 aa17.71■□□□□ 0.43
CSNK1D-213ENST00000580446 CYBAP13498 195 aa17.71■□□□□ 0.43
CSNK1D-213ENST00000580446 JAG1P78504 1218 aa17.71■□□□□ 0.43
CSNK1D-213ENST00000580446 WDR43Q15061 677 aaKnown RBP eCLIP17.71■□□□□ 0.43
CSNK1D-213ENST00000580446 SH3D19Q5HYK7 790 aa17.71■□□□□ 0.43
CSNK1D-213ENST00000580446 ARRDC4Q8NCT1 418 aa17.71■□□□□ 0.43
CSNK1D-213ENST00000580446 USP17L5A8MUK1 530 aa17.7■□□□□ 0.42
CSNK1D-213ENST00000580446 GPR37L1O60883 481 aa17.7■□□□□ 0.42
CSNK1D-213ENST00000580446 PDE8BO95263 885 aa17.7■□□□□ 0.42
CSNK1D-213ENST00000580446 TWISTNBQ3B726 338 aaPredicted RBP17.7■□□□□ 0.42
CSNK1D-213ENST00000580446 PRAMEF19Q5SWL8 479 aa17.7■□□□□ 0.42
CSNK1D-213ENST00000580446 KAZALD1Q96I82 304 aa17.7■□□□□ 0.42
CSNK1D-213ENST00000580446 UIMC1Q96RL1 719 aa17.7■□□□□ 0.42
CSNK1D-213ENST00000580446 TSPYL2Q9H2G4 693 aaPredicted RBP17.7■□□□□ 0.42
CSNK1D-213ENST00000580446 TMEM39AQ9NV64 488 aa17.7■□□□□ 0.42
CSNK1D-213ENST00000580446 TACC3Q9Y6A5 838 aa17.7■□□□□ 0.42
CSNK1D-213ENST00000580446 CHD7Q9P2D1 2997 aa17.7■□□□□ 0.42
CSNK1D-213ENST00000580446 SMIM22K7EJ46 135 aa17.69■□□□□ 0.42
CSNK1D-213ENST00000580446 KIAA0355O15063 1070 aa17.69■□□□□ 0.42
CSNK1D-213ENST00000580446 CNMDO75829 334 aa17.69■□□□□ 0.42
CSNK1D-213ENST00000580446 ACRP10323 421 aa17.69■□□□□ 0.42
CSNK1D-213ENST00000580446 LRRC41Q15345 812 aa17.69■□□□□ 0.42
CSNK1D-213ENST00000580446 FAM47AQ5JRC9 791 aa17.69■□□□□ 0.42
CSNK1D-213ENST00000580446 C16orf59Q7L2K0 433 aa17.69■□□□□ 0.42
CSNK1D-213ENST00000580446 CD320Q9NPF0 282 aa17.69■□□□□ 0.42
CSNK1D-213ENST00000580446 TMOD4Q9NZQ9 345 aa17.69■□□□□ 0.42
CSNK1D-213ENST00000580446 YBX2Q9Y2T7 364 aaKnown RBP17.69■□□□□ 0.42
CSNK1D-213ENST00000580446 NHLH1Q02575 133 aa17.68■□□□□ 0.42
CSNK1D-213ENST00000580446 C9orf78Q9NZ63 289 aaPredicted RBP17.68■□□□□ 0.42
CSNK1D-213ENST00000580446 IFIT1P09914 478 aaKnown RBP17.67■□□□□ 0.42
CSNK1D-213ENST00000580446 CAP2P40123 477 aa17.67■□□□□ 0.42
CSNK1D-213ENST00000580446 BTDP43251 543 aa17.67■□□□□ 0.42
CSNK1D-213ENST00000580446 OSBPL5Q9H0X9 879 aaPredicted RBP17.67■□□□□ 0.42
CSNK1D-213ENST00000580446 RFXAPO00287 272 aa17.66■□□□□ 0.42
CSNK1D-213ENST00000580446 FGFR2P21802 821 aa17.66■□□□□ 0.42
CSNK1D-213ENST00000580446 PTPREP23469 700 aa17.66■□□□□ 0.42
CSNK1D-213ENST00000580446 HOXA7P31268 230 aaPredicted RBP17.66■□□□□ 0.42
CSNK1D-213ENST00000580446 BACE1P56817 501 aa17.66■□□□□ 0.42
CSNK1D-213ENST00000580446 PUM3Q15397 648 aaKnown RBP17.66■□□□□ 0.42
CSNK1D-213ENST00000580446 KRT40Q6A162 431 aa17.66■□□□□ 0.42
CSNK1D-213ENST00000580446 CHMP4AQ9BY43 222 aa17.66■□□□□ 0.42
CSNK1D-213ENST00000580446 PLXNA1Q9UIW2 1896 aa17.65■□□□□ 0.42
CSNK1D-213ENST00000580446 CALD1Q05682 793 aaKnown RBP17.65■□□□□ 0.42
CSNK1D-213ENST00000580446 AAK1Q2M2I8 961 aa17.65■□□□□ 0.42
CSNK1D-213ENST00000580446 TMEM240Q5SV17 173 aa17.65■□□□□ 0.42
CSNK1D-213ENST00000580446 BICC1Q9H694 974 aaKnown RBP17.65■□□□□ 0.42
CSNK1D-213ENST00000580446 AS3MTQ9HBK9 375 aa17.65■□□□□ 0.42
CSNK1D-213ENST00000580446 SLC15A5A6NIM6 579 aa17.64■□□□□ 0.41
CSNK1D-213ENST00000580446 TLL1O43897 1013 aa17.64■□□□□ 0.41
CSNK1D-213ENST00000580446 MYOGP15173 224 aa17.64■□□□□ 0.41
CSNK1D-213ENST00000580446 RABGGTBP53611 331 aa17.64■□□□□ 0.41
CSNK1D-213ENST00000580446 FAAP100Q0VG06 881 aa17.64■□□□□ 0.41
CSNK1D-213ENST00000580446 SLC44A5Q8NCS7 719 aa17.64■□□□□ 0.41
CSNK1D-213ENST00000580446 ANKS1AQ92625 1134 aa17.64■□□□□ 0.41
CSNK1D-213ENST00000580446 LENG1Q96BZ8 264 aaPredicted RBP17.64■□□□□ 0.41
CSNK1D-213ENST00000580446 PHOX2BQ99453 314 aa17.64■□□□□ 0.41
CSNK1D-213ENST00000580446 MSRAQ9UJ68 235 aa17.64■□□□□ 0.41
CSNK1D-213ENST00000580446 MYO9BQ13459 2157 aa17.64■□□□□ 0.41
CSNK1D-213ENST00000580446 GAKO14976 1311 aa17.64■□□□□ 0.41
CSNK1D-213ENST00000580446 ERC2O15083 957 aa17.63■□□□□ 0.41
CSNK1D-213ENST00000580446 TBC1D12O60347 775 aa17.63■□□□□ 0.41
CSNK1D-213ENST00000580446 GDF11O95390 407 aa17.63■□□□□ 0.41
CSNK1D-213ENST00000580446 CSF2RAP15509 400 aa17.63■□□□□ 0.41
CSNK1D-213ENST00000580446 ZYXQ15942 572 aaKnown RBP17.63■□□□□ 0.41
CSNK1D-213ENST00000580446 C1orf53Q5VUE5 145 aa17.63■□□□□ 0.41
CSNK1D-213ENST00000580446 ZNF365Q70YC5 407 aa17.63■□□□□ 0.41
CSNK1D-213ENST00000580446 SLC28A3Q9HAS3 691 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms