RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 PA2G4Q9UQ80 394 aaKnown RBP23.85■■□□□ 1.41
LIMD2-209ENST00000580222 LOC285556D6RIA3 1793 aa23.85■■□□□ 1.41
LIMD2-209ENST00000580222 ZBTB22O15209 634 aa23.84■■□□□ 1.41
LIMD2-209ENST00000580222 CIAO1O76071 339 aa23.84■■□□□ 1.41
LIMD2-209ENST00000580222 RLBP1P12271 317 aa23.84■■□□□ 1.41
LIMD2-209ENST00000580222 TIMM10P62072 90 aa23.84■■□□□ 1.41
LIMD2-209ENST00000580222 HERVK_113P62684 666 aa23.84■■□□□ 1.41
LIMD2-209ENST00000580222 ZNF697Q5TEC3 545 aa23.84■■□□□ 1.41
LIMD2-209ENST00000580222 MAFAQ8NHW3 353 aaPredicted RBP23.84■■□□□ 1.41
LIMD2-209ENST00000580222 PANK1Q8TE04 598 aa23.84■■□□□ 1.41
LIMD2-209ENST00000580222 SENP6Q9GZR1 1112 aaPredicted RBP23.84■■□□□ 1.41
LIMD2-209ENST00000580222 SUPT16HQ9Y5B9 1047 aaKnown RBP23.84■■□□□ 1.41
LIMD2-209ENST00000580222 MYH13Q9UKX3 1938 aa23.83■■□□□ 1.41
LIMD2-209ENST00000580222 NPM3O75607 178 aaKnown RBP23.83■■□□□ 1.41
LIMD2-209ENST00000580222 HOXA7P31268 230 aaPredicted RBP23.83■■□□□ 1.41
LIMD2-209ENST00000580222 ATN1P54259 1190 aaPredicted RBP23.83■■□□□ 1.41
LIMD2-209ENST00000580222 IRX3P78415 501 aaPredicted RBP23.83■■□□□ 1.41
LIMD2-209ENST00000580222 SHHQ15465 462 aa23.83■■□□□ 1.41
LIMD2-209ENST00000580222 ITPRIPQ8IWB1 547 aa23.83■■□□□ 1.41
LIMD2-209ENST00000580222 ZGPATQ8N5A5 531 aaKnown RBP23.83■■□□□ 1.41
LIMD2-209ENST00000580222 SOCS4Q8WXH5 440 aa23.83■■□□□ 1.41
LIMD2-209ENST00000580222 MYH2Q9UKX2 1941 aa23.82■■□□□ 1.4
LIMD2-209ENST00000580222 C9orf50Q5SZB4 431 aa23.82■■□□□ 1.4
LIMD2-209ENST00000580222 GPR142Q7Z601 462 aa23.82■■□□□ 1.4
LIMD2-209ENST00000580222 MYLIPQ8WY64 445 aa23.82■■□□□ 1.4
LIMD2-209ENST00000580222 LBHD1Q9BQE6 289 aaPredicted RBP23.82■■□□□ 1.4
LIMD2-209ENST00000580222 WDR18Q9BV38 432 aa23.82■■□□□ 1.4
LIMD2-209ENST00000580222 TTYH1Q9H313 450 aaPredicted RBP23.82■■□□□ 1.4
LIMD2-209ENST00000580222 FLRT1Q9NZU1 646 aa23.82■■□□□ 1.4
LIMD2-209ENST00000580222 BACE1P56817 501 aa23.81■■□□□ 1.4
LIMD2-209ENST00000580222 PDE3AQ14432 1141 aa23.81■■□□□ 1.4
LIMD2-209ENST00000580222 SLF2Q8IX21 1173 aa23.81■■□□□ 1.4
LIMD2-209ENST00000580222 TBC1D2Q9BYX2 928 aa23.81■■□□□ 1.4
LIMD2-209ENST00000580222 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.81■■□□□ 1.4
LIMD2-209ENST00000580222 C20orf194Q5TEA3 1177 aa23.8■■□□□ 1.4
LIMD2-209ENST00000580222 TBC1D9Q6ZT07 1266 aa23.8■■□□□ 1.4
LIMD2-209ENST00000580222 TRMT44Q8IYL2 757 aaKnown RBP23.8■■□□□ 1.4
LIMD2-209ENST00000580222 FBXO3Q9UK99 471 aa23.8■■□□□ 1.4
LIMD2-209ENST00000580222 NDUFB9Q9Y6M9 179 aa23.8■■□□□ 1.4
LIMD2-209ENST00000580222 MAPK4P31152 587 aa23.79■■□□□ 1.4
LIMD2-209ENST00000580222 RGS2P41220 211 aa23.79■■□□□ 1.4
LIMD2-209ENST00000580222 ERVK-9P63128 1117 aa23.79■■□□□ 1.4
LIMD2-209ENST00000580222 ERVK-24P63145 666 aa23.79■■□□□ 1.4
LIMD2-209ENST00000580222 PI16Q6UXB8 463 aa23.79■■□□□ 1.4
LIMD2-209ENST00000580222 PLEKHH3Q7Z736 793 aa23.79■■□□□ 1.4
LIMD2-209ENST00000580222 PDS5AQ29RF7 1337 aaKnown RBP23.79■■□□□ 1.4
LIMD2-209ENST00000580222 IL15P40933 162 aaPredicted RBP23.78■■□□□ 1.4
LIMD2-209ENST00000580222 SPTY2D1Q68D10 685 aaPredicted RBP23.78■■□□□ 1.4
LIMD2-209ENST00000580222 ERICH6Q7L0X2 663 aa23.78■■□□□ 1.4
LIMD2-209ENST00000580222 NSUN4Q96CB9 384 aaKnown RBP23.78■■□□□ 1.4
LIMD2-209ENST00000580222 PAGR1Q9BTK6 254 aa23.78■■□□□ 1.4
LIMD2-209ENST00000580222 DNAJC18Q9H819 358 aa23.78■■□□□ 1.4
LIMD2-209ENST00000580222 AS3MTQ9HBK9 375 aa23.78■■□□□ 1.4
LIMD2-209ENST00000580222 COG6Q9Y2V7 657 aa23.78■■□□□ 1.4
LIMD2-209ENST00000580222 RTP1P59025 263 aa23.77■■□□□ 1.4
LIMD2-209ENST00000580222 MVPQ14764 893 aaKnown RBP23.77■■□□□ 1.4
LIMD2-209ENST00000580222 APBA2Q99767 749 aa23.77■■□□□ 1.4
LIMD2-209ENST00000580222 TMOD4Q9NZQ9 345 aa23.77■■□□□ 1.4
LIMD2-209ENST00000580222 CNMDO75829 334 aa23.76■■□□□ 1.39
LIMD2-209ENST00000580222 TRPV1Q8NER1 839 aa23.76■■□□□ 1.39
LIMD2-209ENST00000580222 XAGE2Q96GT9 111 aa23.76■■□□□ 1.39
LIMD2-209ENST00000580222 MEIS3Q99687 375 aa23.76■■□□□ 1.39
LIMD2-209ENST00000580222 EMILIN3Q9NT22 766 aa23.76■■□□□ 1.39
LIMD2-209ENST00000580222 HMG20BQ9P0W2 317 aa23.76■■□□□ 1.39
LIMD2-209ENST00000580222 RAPGEFL1Q9UHV5 662 aa23.76■■□□□ 1.39
LIMD2-209ENST00000580222 UBTFL1P0CB47 393 aaPredicted RBP23.75■■□□□ 1.39
LIMD2-209ENST00000580222 MAP2K5Q13163 448 aa23.75■■□□□ 1.39
LIMD2-209ENST00000580222 SH3RF3Q8TEJ3 882 aaPredicted RBP23.75■■□□□ 1.39
LIMD2-209ENST00000580222 DDX20Q9UHI6 824 aaKnown RBP23.75■■□□□ 1.39
LIMD2-209ENST00000580222 HERC5Q9UII4 1024 aaKnown RBP23.75■■□□□ 1.39
LIMD2-209ENST00000580222 DDX19BQ9UMR2 479 aa23.75■■□□□ 1.39
LIMD2-209ENST00000580222 TEX11Q8IYF3 940 aa23.74■■□□□ 1.39
LIMD2-209ENST00000580222 EDC3Q96F86 508 aaKnown RBP23.74■■□□□ 1.39
LIMD2-209ENST00000580222 A0A1B0GUL7 405 aa23.73■■□□□ 1.39
LIMD2-209ENST00000580222 GDF11O95390 407 aa23.73■■□□□ 1.39
LIMD2-209ENST00000580222 GNAI3P08754 354 aa23.73■■□□□ 1.39
LIMD2-209ENST00000580222 BADQ92934 168 aa23.73■■□□□ 1.39
LIMD2-209ENST00000580222 COPRSQ9NQ92 184 aa23.73■■□□□ 1.39
LIMD2-209ENST00000580222 ATP11BQ9Y2G3 1177 aa23.73■■□□□ 1.39
LIMD2-209ENST00000580222 C19orf81C9J6K1 198 aa23.72■■□□□ 1.39
LIMD2-209ENST00000580222 USP17L10C9JJH3 530 aa23.72■■□□□ 1.39
LIMD2-209ENST00000580222 ASNSP08243 561 aa23.72■■□□□ 1.39
LIMD2-209ENST00000580222 COL9A1P20849 921 aa23.72■■□□□ 1.39
LIMD2-209ENST00000580222 CYP2C19P33261 490 aa23.72■■□□□ 1.39
LIMD2-209ENST00000580222 TFCP2Q12800 502 aa23.72■■□□□ 1.39
LIMD2-209ENST00000580222 GJC2Q5T442 439 aaPredicted RBP23.72■■□□□ 1.39
LIMD2-209ENST00000580222 CCAR1Q8IX12 1150 aaKnown RBP23.72■■□□□ 1.39
LIMD2-209ENST00000580222 NPLOC4Q8TAT6 608 aa23.72■■□□□ 1.39
LIMD2-209ENST00000580222 LPAR1Q92633 364 aa23.72■■□□□ 1.39
LIMD2-209ENST00000580222 PI4KBQ9UBF8 816 aa23.72■■□□□ 1.39
LIMD2-209ENST00000580222 MAP4K4O95819 1239 aaPredicted RBP23.71■■□□□ 1.39
LIMD2-209ENST00000580222 IGHA2P01877 340 aa23.71■■□□□ 1.39
LIMD2-209ENST00000580222 CNGA1P29973 690 aa23.71■■□□□ 1.39
LIMD2-209ENST00000580222 MFSD14CQ5VZR4 134 aa23.71■■□□□ 1.39
LIMD2-209ENST00000580222 SH3RF1Q7Z6J0 888 aa23.71■■□□□ 1.39
LIMD2-209ENST00000580222 USP38Q8NB14 1042 aa23.71■■□□□ 1.39
LIMD2-209ENST00000580222 HDAC5Q9UQL6 1122 aa23.71■■□□□ 1.39
LIMD2-209ENST00000580222 MAST2Q6P0Q8 1798 aa23.7■■□□□ 1.39
LIMD2-209ENST00000580222 DNM1LO00429 736 aa23.7■■□□□ 1.38
LIMD2-209ENST00000580222 LDHCP07864 332 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms