RNA–Protein interactions for RNA: ENST00000580219.5

SNX11-206, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-206ENST00000580219 FBXO33Q7Z6M2 555 aa11.59□□□□□ -0.55
SNX11-206ENST00000580219 PUS7LQ9H0K6 701 aaKnown RBP11.59□□□□□ -0.55
SNX11-206ENST00000580219 PODXL2Q9NZ53 605 aa11.59□□□□□ -0.55
SNX11-206ENST00000580219 DENND2AQ9ULE3 1009 aa11.59□□□□□ -0.55
SNX11-206ENST00000580219 WDR19Q8NEZ3 1342 aa11.59□□□□□ -0.55
SNX11-206ENST00000580219 ZNF532Q9HCE3 1301 aa11.59□□□□□ -0.55
SNX11-206ENST00000580219 SNAP23O00161 211 aa11.58□□□□□ -0.56
SNX11-206ENST00000580219 FOXP2O15409 715 aa11.58□□□□□ -0.56
SNX11-206ENST00000580219 BAG4O95429 457 aaKnown RBP11.58□□□□□ -0.56
SNX11-206ENST00000580219 CPA1P15085 419 aa11.58□□□□□ -0.56
SNX11-206ENST00000580219 BCAMP50895 628 aa11.58□□□□□ -0.56
SNX11-206ENST00000580219 TOB2Q14106 344 aaPredicted RBP11.58□□□□□ -0.56
SNX11-206ENST00000580219 LRIT3Q3SXY7 679 aa11.58□□□□□ -0.56
SNX11-206ENST00000580219 SLFNL1Q499Z3 407 aa11.58□□□□□ -0.56
SNX11-206ENST00000580219 MOB2Q70IA6 237 aa11.58□□□□□ -0.56
SNX11-206ENST00000580219 NOL8Q76FK4 1167 aaKnown RBP11.58□□□□□ -0.56
SNX11-206ENST00000580219 SULF1Q8IWU6 871 aa11.58□□□□□ -0.56
SNX11-206ENST00000580219 AGXT2Q9BYV1 514 aa11.58□□□□□ -0.56
SNX11-206ENST00000580219 TMX4Q9H1E5 349 aaPredicted RBP11.58□□□□□ -0.56
SNX11-206ENST00000580219 ANKIB1Q9P2G1 1089 aa11.58□□□□□ -0.56
SNX11-206ENST00000580219 NSFL1CQ9UNZ2 370 aaKnown RBP11.58□□□□□ -0.56
SNX11-206ENST00000580219 SMC3Q9UQE7 1217 aa11.58□□□□□ -0.56
SNX11-206ENST00000580219 LEMD3Q9Y2U8 911 aa11.58□□□□□ -0.56
SNX11-206ENST00000580219 IRS2Q9Y4H2 1338 aa11.58□□□□□ -0.56
SNX11-206ENST00000580219 E7EWF7 191 aa11.57□□□□□ -0.56
SNX11-206ENST00000580219 ALDH1A1P00352 501 aa11.57□□□□□ -0.56
SNX11-206ENST00000580219 FGAP02671 866 aa11.57□□□□□ -0.56
SNX11-206ENST00000580219 ATP2B4P23634 1241 aa11.57□□□□□ -0.56
SNX11-206ENST00000580219 FKBP1BP68106 108 aa11.57□□□□□ -0.56
SNX11-206ENST00000580219 CAP1Q01518 475 aa11.57□□□□□ -0.56
SNX11-206ENST00000580219 EXOSC10Q01780 885 aaKnown RBP11.57□□□□□ -0.56
SNX11-206ENST00000580219 ME3Q16798 604 aa11.57□□□□□ -0.56
SNX11-206ENST00000580219 GRIPAP1Q4V328 841 aa11.57□□□□□ -0.56
SNX11-206ENST00000580219 DPP8Q6V1X1 898 aaPredicted RBP11.57□□□□□ -0.56
SNX11-206ENST00000580219 C15orf52Q6ZUT6 534 aaKnown RBP11.57□□□□□ -0.56
SNX11-206ENST00000580219 STOX1Q6ZVD7 989 aa11.57□□□□□ -0.56
SNX11-206ENST00000580219 TBC1D16Q8TBP0 767 aa11.57□□□□□ -0.56
SNX11-206ENST00000580219 STRBPQ96SI9 672 aaKnown RBP11.57□□□□□ -0.56
SNX11-206ENST00000580219 GGA1Q9UJY5 639 aa11.57□□□□□ -0.56
SNX11-206ENST00000580219 TPCN1Q9ULQ1 816 aa11.57□□□□□ -0.56
SNX11-206ENST00000580219 ZDHHC9Q9Y397 364 aa11.57□□□□□ -0.56
SNX11-206ENST00000580219 BOLA1Q9Y3E2 137 aa11.57□□□□□ -0.56
SNX11-206ENST00000580219 PTCH2Q9Y6C5 1203 aa11.57□□□□□ -0.56
SNX11-206ENST00000580219 TAF6LQ9Y6J9 622 aa11.57□□□□□ -0.56
SNX11-206ENST00000580219 LAMB1P07942 1786 aa11.56□□□□□ -0.56
SNX11-206ENST00000580219 ZNF213O14771 459 aa11.56□□□□□ -0.56
SNX11-206ENST00000580219 UFL1O94874 794 aa11.56□□□□□ -0.56
SNX11-206ENST00000580219 PDCP20941 246 aa11.56□□□□□ -0.56
SNX11-206ENST00000580219 TNIP1Q15025 636 aa11.56□□□□□ -0.56
SNX11-206ENST00000580219 VPS37DQ86XT2 251 aa11.56□□□□□ -0.56
SNX11-206ENST00000580219 MAGEB6Q8N7X4 407 aa11.56□□□□□ -0.56
SNX11-206ENST00000580219 FAM84BQ96KN1 310 aaPredicted RBP11.56□□□□□ -0.56
SNX11-206ENST00000580219 RTFDC1Q9BY42 306 aaPredicted RBP11.56□□□□□ -0.56
SNX11-206ENST00000580219 GGA3Q9NZ52 723 aa11.56□□□□□ -0.56
SNX11-206ENST00000580219 POLLQ9UGP5 575 aa11.56□□□□□ -0.56
SNX11-206ENST00000580219 MUC6Q6W4X9 2439 aa11.55□□□□□ -0.56
SNX11-206ENST00000580219 PATL2C9JE40 543 aaKnown RBP11.55□□□□□ -0.56
SNX11-206ENST00000580219 UBE2Q2LH0YL09 131 aa11.55□□□□□ -0.56
SNX11-206ENST00000580219 TRAK2O60296 914 aa11.55□□□□□ -0.56
SNX11-206ENST00000580219 LARGE1O95461 756 aa11.55□□□□□ -0.56
SNX11-206ENST00000580219 HIBADHP31937 336 aaKnown RBP11.55□□□□□ -0.56
SNX11-206ENST00000580219 BMP8BP34820 402 aa11.55□□□□□ -0.56
SNX11-206ENST00000580219 GYG1P46976 350 aa11.55□□□□□ -0.56
SNX11-206ENST00000580219 EVCP57679 992 aa11.55□□□□□ -0.56
SNX11-206ENST00000580219 PKP1Q13835 747 aa11.55□□□□□ -0.56
SNX11-206ENST00000580219 RBM26Q5T8P6 1007 aaKnown RBP11.55□□□□□ -0.56
SNX11-206ENST00000580219 Q6ZUG5 572 aa11.55□□□□□ -0.56
SNX11-206ENST00000580219 UBE2Q1Q7Z7E8 422 aa11.55□□□□□ -0.56
SNX11-206ENST00000580219 ALYREFQ86V81 257 aaKnown RBP11.55□□□□□ -0.56
SNX11-206ENST00000580219 CCDC83Q8IWF9 413 aa11.55□□□□□ -0.56
SNX11-206ENST00000580219 SLAIN1Q8ND83 568 aa11.55□□□□□ -0.56
SNX11-206ENST00000580219 FAM161BQ96MY7 647 aa11.55□□□□□ -0.56
SNX11-206ENST00000580219 LLPHQ9BRT6 129 aaKnown RBP11.55□□□□□ -0.56
SNX11-206ENST00000580219 TMEM121BQ9BXQ6 578 aaPredicted RBP11.55□□□□□ -0.56
SNX11-206ENST00000580219 LRP2BPQ9P2M1 347 aa11.55□□□□□ -0.56
SNX11-206ENST00000580219 LAMA4Q16363 1823 aa11.54□□□□□ -0.56
SNX11-206ENST00000580219 C6orf229H3BNL8 230 aa11.54□□□□□ -0.56
SNX11-206ENST00000580219 EVI5O60447 810 aa11.54□□□□□ -0.56
SNX11-206ENST00000580219 KLRK1P26718 216 aa11.54□□□□□ -0.56
SNX11-206ENST00000580219 FGD1P98174 961 aa11.54□□□□□ -0.56
SNX11-206ENST00000580219 ST3GAL1Q11201 340 aa11.54□□□□□ -0.56
SNX11-206ENST00000580219 SUPT20HQ8NEM7 779 aa11.54□□□□□ -0.56
SNX11-206ENST00000580219 MAFAQ8NHW3 353 aaPredicted RBP11.54□□□□□ -0.56
SNX11-206ENST00000580219 NCOA7Q8NI08 942 aa11.54□□□□□ -0.56
SNX11-206ENST00000580219 SH3TC2Q8TF17 1288 aa11.54□□□□□ -0.56
SNX11-206ENST00000580219 GTF3C6Q969F1 213 aa11.54□□□□□ -0.56
SNX11-206ENST00000580219 GDF15Q99988 308 aa11.54□□□□□ -0.56
SNX11-206ENST00000580219 NACAP1Q9BZK3 213 aa11.54□□□□□ -0.56
SNX11-206ENST00000580219 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.54□□□□□ -0.56
SNX11-206ENST00000580219 ATP6V1DQ9Y5K8 247 aa11.54□□□□□ -0.56
SNX11-206ENST00000580219 COL1A1P02452 1464 aaPredicted RBP11.54□□□□□ -0.56
SNX11-206ENST00000580219 SALL1Q9NSC2 1324 aa11.54□□□□□ -0.56
SNX11-206ENST00000580219 ZSWIM8A7E2V4 1837 aa11.53□□□□□ -0.56
SNX11-206ENST00000580219 STX6O43752 255 aa11.53□□□□□ -0.56
SNX11-206ENST00000580219 PFKFB2O60825 505 aa11.53□□□□□ -0.56
SNX11-206ENST00000580219 MBD4O95243 580 aa11.53□□□□□ -0.56
SNX11-206ENST00000580219 ZSCAN22P10073 491 aaPredicted RBP11.53□□□□□ -0.56
SNX11-206ENST00000580219 GJB2P29033 226 aa11.53□□□□□ -0.56
SNX11-206ENST00000580219 MCM5P33992 734 aa11.53□□□□□ -0.56
SNX11-206ENST00000580219 TRDNQ13061 729 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms