RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 TMEM57Q8N5G2 664 aa21.87■■□□□ 1.09
MKS1-209ENST00000580127 NUDT12Q9BQG2 462 aa21.87■■□□□ 1.09
MKS1-209ENST00000580127 DBNDD2Q9BQY9 259 aa21.87■■□□□ 1.09
MKS1-209ENST00000580127 GJD2Q9UKL4 321 aa21.87■■□□□ 1.09
MKS1-209ENST00000580127 CYP2E1P05181 493 aaPredicted RBP21.86■■□□□ 1.09
MKS1-209ENST00000580127 MAPK4P31152 587 aa21.86■■□□□ 1.09
MKS1-209ENST00000580127 RRP1BQ14684 758 aaKnown RBP21.86■■□□□ 1.09
MKS1-209ENST00000580127 METTL16Q86W50 562 aaKnown RBP21.86■■□□□ 1.09
MKS1-209ENST00000580127 P2RX7Q99572 595 aaKnown RBP21.86■■□□□ 1.09
MKS1-209ENST00000580127 NBPF3Q9H094 633 aa21.86■■□□□ 1.09
MKS1-209ENST00000580127 PALD1Q9ULE6 856 aa21.86■■□□□ 1.09
MKS1-209ENST00000580127 XRCC5P13010 732 aaKnown RBP21.85■■□□□ 1.09
MKS1-209ENST00000580127 CYP7A1P22680 504 aa21.85■■□□□ 1.09
MKS1-209ENST00000580127 SOCS4Q8WXH5 440 aa21.85■■□□□ 1.09
MKS1-209ENST00000580127 CWC22Q9HCG8 908 aaKnown RBP21.85■■□□□ 1.09
MKS1-209ENST00000580127 LOC285556D6RIA3 1793 aa21.84■■□□□ 1.09
MKS1-209ENST00000580127 FLT1P17948 1338 aa21.84■■□□□ 1.09
MKS1-209ENST00000580127 HERVK_113P62684 666 aa21.84■■□□□ 1.09
MKS1-209ENST00000580127 USP17L2Q6R6M4 530 aa21.84■■□□□ 1.09
MKS1-209ENST00000580127 NOP58Q9Y2X3 529 aaKnown RBP21.84■■□□□ 1.09
MKS1-209ENST00000580127 GLRX3O76003 335 aaKnown RBP21.83■■□□□ 1.09
MKS1-209ENST00000580127 CYP2B6P20813 491 aa21.83■■□□□ 1.09
MKS1-209ENST00000580127 ZAP70P43403 619 aa21.83■■□□□ 1.09
MKS1-209ENST00000580127 USP5P45974 858 aa21.83■■□□□ 1.09
MKS1-209ENST00000580127 SAP30BPQ9UHR5 308 aaKnown RBP21.83■■□□□ 1.09
MKS1-209ENST00000580127 TNNQ9UQP3 1299 aa21.83■■□□□ 1.09
MKS1-209ENST00000580127 IDH1O75874 414 aaKnown RBP21.82■■□□□ 1.08
MKS1-209ENST00000580127 CCNA1P78396 465 aa21.82■■□□□ 1.08
MKS1-209ENST00000580127 MAP3K12Q12852 859 aa21.82■■□□□ 1.08
MKS1-209ENST00000580127 TTC6Q86TZ1 520 aa21.82■■□□□ 1.08
MKS1-209ENST00000580127 PRO3102Q9H379 93 aa21.82■■□□□ 1.08
MKS1-209ENST00000580127 ZBTB21Q9ULJ3 1066 aa21.82■■□□□ 1.08
MKS1-209ENST00000580127 GDF11O95390 407 aa21.81■■□□□ 1.08
MKS1-209ENST00000580127 RGS2P41220 211 aa21.81■■□□□ 1.08
MKS1-209ENST00000580127 ERC1Q8IUD2 1116 aa21.81■■□□□ 1.08
MKS1-209ENST00000580127 ITPRIPQ8IWB1 547 aa21.81■■□□□ 1.08
MKS1-209ENST00000580127 FEZ1Q99689 392 aa21.81■■□□□ 1.08
MKS1-209ENST00000580127 CABP5Q9NP86 173 aa21.81■■□□□ 1.08
MKS1-209ENST00000580127 STAP2Q9UGK3 403 aa21.81■■□□□ 1.08
MKS1-209ENST00000580127 ZKSCAN1P17029 563 aaPredicted RBP21.8■■□□□ 1.08
MKS1-209ENST00000580127 USP14P54578 494 aa21.8■■□□□ 1.08
MKS1-209ENST00000580127 ADGRA1Q86SQ6 560 aa21.8■■□□□ 1.08
MKS1-209ENST00000580127 CCDC8Q9H0W5 538 aaPredicted RBP21.8■■□□□ 1.08
MKS1-209ENST00000580127 C11orf49Q9H6J7 331 aa21.8■■□□□ 1.08
MKS1-209ENST00000580127 PIH1D3Q9NQM4 214 aaKnown RBP21.8■■□□□ 1.08
MKS1-209ENST00000580127 RBPJLQ9UBG7 517 aa21.8■■□□□ 1.08
MKS1-209ENST00000580127 SERPINB13Q9UIV8 391 aa21.8■■□□□ 1.08
MKS1-209ENST00000580127 USP17L15C9J2P7 530 aa21.79■■□□□ 1.08
MKS1-209ENST00000580127 USP17L13C9JLJ4 530 aa21.79■■□□□ 1.08
MKS1-209ENST00000580127 USP17L11C9JVI0 530 aa21.79■■□□□ 1.08
MKS1-209ENST00000580127 USP17L18D6R9N7 530 aa21.79■■□□□ 1.08
MKS1-209ENST00000580127 USP17L22D6RA61 530 aa21.79■■□□□ 1.08
MKS1-209ENST00000580127 USP17L17D6RBQ6 530 aa21.79■■□□□ 1.08
MKS1-209ENST00000580127 USP17L19D6RCP7 530 aa21.79■■□□□ 1.08
MKS1-209ENST00000580127 USP17L20D6RJB6 530 aa21.79■■□□□ 1.08
MKS1-209ENST00000580127 ERVK-9P63128 1117 aa21.79■■□□□ 1.08
MKS1-209ENST00000580127 ERVK-24P63145 666 aa21.79■■□□□ 1.08
MKS1-209ENST00000580127 USP17L24Q0WX57 530 aa21.79■■□□□ 1.08
MKS1-209ENST00000580127 PLEKHH3Q7Z736 793 aa21.79■■□□□ 1.08
MKS1-209ENST00000580127 PAGR1Q9BTK6 254 aa21.79■■□□□ 1.08
MKS1-209ENST00000580127 DBNLQ9UJU6 430 aaKnown RBP21.79■■□□□ 1.08
MKS1-209ENST00000580127 OGDHLQ9ULD0 1010 aa21.79■■□□□ 1.08
MKS1-209ENST00000580127 RABGAP1Q9Y3P9 1069 aa21.79■■□□□ 1.08
MKS1-209ENST00000580127 GH2P01242 217 aa21.78■■□□□ 1.08
MKS1-209ENST00000580127 PRKAR2AP13861 404 aaKnown RBP21.78■■□□□ 1.08
MKS1-209ENST00000580127 BMP8BP34820 402 aa21.78■■□□□ 1.08
MKS1-209ENST00000580127 DYNLL1P63167 89 aaKnown RBP21.78■■□□□ 1.08
MKS1-209ENST00000580127 CERKLQ49MI3 558 aaPredicted RBP21.78■■□□□ 1.08
MKS1-209ENST00000580127 HSP90AB4PQ58FF6 505 aa21.78■■□□□ 1.08
MKS1-209ENST00000580127 C7orf61Q8IZ16 206 aa21.78■■□□□ 1.08
MKS1-209ENST00000580127 MAGEB6Q8N7X4 407 aa21.78■■□□□ 1.08
MKS1-209ENST00000580127 DIS3LQ8TF46 1054 aaKnown RBP21.78■■□□□ 1.08
MKS1-209ENST00000580127 TRIB2Q92519 343 aa21.78■■□□□ 1.08
MKS1-209ENST00000580127 DNAJC18Q9H819 358 aa21.78■■□□□ 1.08
MKS1-209ENST00000580127 MAST2Q6P0Q8 1798 aa21.77■■□□□ 1.08
MKS1-209ENST00000580127 JAG1P78504 1218 aa21.77■■□□□ 1.08
MKS1-209ENST00000580127 TTF1Q15361 905 aaPredicted RBP21.77■■□□□ 1.08
MKS1-209ENST00000580127 MIGA1Q8NAN2 632 aa21.77■■□□□ 1.08
MKS1-209ENST00000580127 EHD4Q9H223 541 aa21.77■■□□□ 1.08
MKS1-209ENST00000580127 C1orf115Q9H7X2 142 aa21.77■■□□□ 1.08
MKS1-209ENST00000580127 TXNRD2Q9NNW7 524 aa21.77■■□□□ 1.08
MKS1-209ENST00000580127 EMILIN3Q9NT22 766 aa21.77■■□□□ 1.08
MKS1-209ENST00000580127 FOCADQ5VW36 1801 aa21.76■■□□□ 1.07
MKS1-209ENST00000580127 TRIM32Q13049 653 aa21.76■■□□□ 1.07
MKS1-209ENST00000580127 RAB3GAP1Q15042 981 aa21.76■■□□□ 1.07
MKS1-209ENST00000580127 ABCB5Q2M3G0 1257 aa21.76■■□□□ 1.07
MKS1-209ENST00000580127 MAP3K21Q5TCX8 1036 aa21.76■■□□□ 1.07
MKS1-209ENST00000580127 TATDN1Q6P1N9 297 aa21.76■■□□□ 1.07
MKS1-209ENST00000580127 GPR142Q7Z601 462 aa21.76■■□□□ 1.07
MKS1-209ENST00000580127 EAF2Q96CJ1 260 aaPredicted RBP21.76■■□□□ 1.07
MKS1-209ENST00000580127 IVNS1ABPQ9Y6Y0 642 aa21.76■■□□□ 1.07
MKS1-209ENST00000580127 MYH1P12882 1939 aa21.76■■□□□ 1.07
MKS1-209ENST00000580127 CDK5RAP2Q96SN8 1893 aa21.75■■□□□ 1.07
MKS1-209ENST00000580127 Q3C1V9 767 aa21.75■■□□□ 1.07
MKS1-209ENST00000580127 EDC3Q96F86 508 aaKnown RBP21.75■■□□□ 1.07
MKS1-209ENST00000580127 C12orf42Q96LP6 360 aa21.75■■□□□ 1.07
MKS1-209ENST00000580127 POLR3DP05423 398 aaPredicted RBP21.74■■□□□ 1.07
MKS1-209ENST00000580127 MS4A1P11836 297 aa21.74■■□□□ 1.07
MKS1-209ENST00000580127 CACNB2Q08289 660 aaPredicted RBP21.74■■□□□ 1.07
MKS1-209ENST00000580127 MORN1Q5T089 497 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms