RNA–Protein interactions for RNA: ENST00000579814.1

LIMD2-208, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-208ENST00000579814 CERKLQ49MI3 558 aaPredicted RBP31.57■■■□□ 2.64
LIMD2-208ENST00000579814 PUS7LQ9H0K6 701 aaKnown RBP31.57■■■□□ 2.64
LIMD2-208ENST00000579814 ZFYP08048 801 aaPredicted RBP31.56■■■□□ 2.64
LIMD2-208ENST00000579814 HMGCS2P54868 508 aa31.56■■■□□ 2.64
LIMD2-208ENST00000579814 PI4K2BQ8TCG2 481 aa31.56■■■□□ 2.64
LIMD2-208ENST00000579814 PTPN22Q9Y2R2 807 aa31.56■■■□□ 2.64
LIMD2-208ENST00000579814 RNF113AO15541 343 aaKnown RBP31.55■■■□□ 2.64
LIMD2-208ENST00000579814 GH2P01242 217 aa31.55■■■□□ 2.64
LIMD2-208ENST00000579814 LACTBP83111 547 aaPredicted RBP31.55■■■□□ 2.64
LIMD2-208ENST00000579814 SH3D19Q5HYK7 790 aa31.55■■■□□ 2.64
LIMD2-208ENST00000579814 SLC4A4Q9Y6R1 1079 aa31.55■■■□□ 2.64
LIMD2-208ENST00000579814 BACE1P56817 501 aa31.54■■■□□ 2.64
LIMD2-208ENST00000579814 PABPC4Q13310 644 aaKnown RBP eCLIP31.54■■■□□ 2.64
LIMD2-208ENST00000579814 AMOTL1Q8IY63 956 aa31.54■■■□□ 2.64
LIMD2-208ENST00000579814 CABP5Q9NP86 173 aa31.54■■■□□ 2.64
LIMD2-208ENST00000579814 TMOD4Q9NZQ9 345 aa31.54■■■□□ 2.64
LIMD2-208ENST00000579814 PNMA3Q9UL41 463 aa31.54■■■□□ 2.64
LIMD2-208ENST00000579814 ADGRA2Q96PE1 1338 aa31.53■■■□□ 2.64
LIMD2-208ENST00000579814 C19orf81C9J6K1 198 aa31.53■■■□□ 2.64
LIMD2-208ENST00000579814 GABPAQ06546 454 aa31.53■■■□□ 2.64
LIMD2-208ENST00000579814 MTMR2Q13614 643 aa31.53■■■□□ 2.64
LIMD2-208ENST00000579814 ABCB5Q2M3G0 1257 aa31.53■■■□□ 2.64
LIMD2-208ENST00000579814 SHROOM1Q2M3G4 852 aaPredicted RBP31.53■■■□□ 2.64
LIMD2-208ENST00000579814 TREML2Q5T2D2 321 aa31.53■■■□□ 2.64
LIMD2-208ENST00000579814 SMCR8Q8TEV9 937 aaPredicted RBP31.53■■■□□ 2.64
LIMD2-208ENST00000579814 APPBP2Q92624 585 aa31.53■■■□□ 2.64
LIMD2-208ENST00000579814 TAOK2Q9UL54 1235 aa31.53■■■□□ 2.64
LIMD2-208ENST00000579814 DOCK1Q14185 1865 aa31.52■■■□□ 2.64
LIMD2-208ENST00000579814 USP17L10C9JJH3 530 aa31.52■■■□□ 2.64
LIMD2-208ENST00000579814 GNRH1P01148 92 aa31.52■■■□□ 2.64
LIMD2-208ENST00000579814 SHMT1P34896 483 aa31.52■■■□□ 2.64
LIMD2-208ENST00000579814 CAP1Q01518 475 aa31.52■■■□□ 2.64
LIMD2-208ENST00000579814 STRBPQ96SI9 672 aaKnown RBP31.51■■■□□ 2.63
LIMD2-208ENST00000579814 SWAP70Q9UH65 585 aa31.51■■■□□ 2.63
LIMD2-208ENST00000579814 CYP2D6P10635 497 aa31.5■■■□□ 2.63
LIMD2-208ENST00000579814 BCRP11274 1271 aa31.5■■■□□ 2.63
LIMD2-208ENST00000579814 OSBPP22059 807 aa31.5■■■□□ 2.63
LIMD2-208ENST00000579814 RAB3GAP1Q15042 981 aa31.5■■■□□ 2.63
LIMD2-208ENST00000579814 SMC5Q8IY18 1101 aa31.5■■■□□ 2.63
LIMD2-208ENST00000579814 OSBP2Q969R2 916 aa31.5■■■□□ 2.63
LIMD2-208ENST00000579814 SALL3Q9BXA9 1300 aa31.49■■■□□ 2.63
LIMD2-208ENST00000579814 USP17L12C9JPN9 530 aa31.49■■■□□ 2.63
LIMD2-208ENST00000579814 USP17L21D6R901 530 aa31.49■■■□□ 2.63
LIMD2-208ENST00000579814 PSMC4P43686 418 aa31.49■■■□□ 2.63
LIMD2-208ENST00000579814 FSD1Q9BTV5 496 aa31.49■■■□□ 2.63
LIMD2-208ENST00000579814 ARHGAP39Q9C0H5 1083 aa31.49■■■□□ 2.63
LIMD2-208ENST00000579814 STAP2Q9UGK3 403 aa31.49■■■□□ 2.63
LIMD2-208ENST00000579814 FOCADQ5VW36 1801 aa31.49■■■□□ 2.63
LIMD2-208ENST00000579814 C12orf60Q5U649 245 aa31.48■■■□□ 2.63
LIMD2-208ENST00000579814 SIPA1L1O43166 1804 aa31.47■■■□□ 2.63
LIMD2-208ENST00000579814 CDK5RAP2Q96SN8 1893 aa31.47■■■□□ 2.63
LIMD2-208ENST00000579814 ECM2O94769 699 aaPredicted RBP31.47■■■□□ 2.63
LIMD2-208ENST00000579814 FMNL1O95466 1100 aaPredicted RBP31.47■■■□□ 2.63
LIMD2-208ENST00000579814 IGHDP01880 384 aa31.47■■■□□ 2.63
LIMD2-208ENST00000579814 HOXD10P28358 340 aa31.47■■■□□ 2.63
LIMD2-208ENST00000579814 PDE1AP54750 535 aa31.47■■■□□ 2.63
LIMD2-208ENST00000579814 EVX2Q03828 476 aa31.47■■■□□ 2.63
LIMD2-208ENST00000579814 B4GALNT3Q6L9W6 998 aa31.47■■■□□ 2.63
LIMD2-208ENST00000579814 MPHOSPH10O00566 681 aaKnown RBP31.46■■■□□ 2.63
LIMD2-208ENST00000579814 PRMT2P55345 433 aa31.46■■■□□ 2.63
LIMD2-208ENST00000579814 USP17L2Q6R6M4 530 aa31.46■■■□□ 2.63
LIMD2-208ENST00000579814 DYNLL2Q96FJ2 89 aa31.46■■■□□ 2.63
LIMD2-208ENST00000579814 FEZ1Q99689 392 aa31.46■■■□□ 2.63
LIMD2-208ENST00000579814 LNPKQ9C0E8 428 aa31.46■■■□□ 2.63
LIMD2-208ENST00000579814 GNAT2P19087 354 aa31.45■■■□□ 2.63
LIMD2-208ENST00000579814 RGS19P49795 217 aa31.45■■■□□ 2.63
LIMD2-208ENST00000579814 GIMAP6Q6P9H5 292 aa31.45■■■□□ 2.63
LIMD2-208ENST00000579814 ASCC2Q9H1I8 757 aaPredicted RBP31.45■■■□□ 2.63
LIMD2-208ENST00000579814 CYP2D7A0A087X1C5 515 aa31.44■■■□□ 2.62
LIMD2-208ENST00000579814 GPAA1O43292 621 aa31.44■■■□□ 2.62
LIMD2-208ENST00000579814 HOXA7P31268 230 aaPredicted RBP31.44■■■□□ 2.62
LIMD2-208ENST00000579814 GCLCP48506 637 aaPredicted RBP31.44■■■□□ 2.62
LIMD2-208ENST00000579814 FCGRTP55899 365 aa31.44■■■□□ 2.62
LIMD2-208ENST00000579814 CTR9Q6PD62 1173 aa31.44■■■□□ 2.62
LIMD2-208ENST00000579814 SLC44A5Q8NCS7 719 aa31.44■■■□□ 2.62
LIMD2-208ENST00000579814 TRIM47Q96LD4 638 aa31.44■■■□□ 2.62
LIMD2-208ENST00000579814 ARPP21Q9UBL0 812 aaPredicted RBP31.44■■■□□ 2.62
LIMD2-208ENST00000579814 MYH1P12882 1939 aa31.43■■■□□ 2.62
LIMD2-208ENST00000579814 USP14P54578 494 aa31.43■■■□□ 2.62
LIMD2-208ENST00000579814 SOX10P56693 466 aa31.43■■■□□ 2.62
LIMD2-208ENST00000579814 IRX3P78415 501 aaPredicted RBP31.43■■■□□ 2.62
LIMD2-208ENST00000579814 ANKRD13CQ8N6S4 541 aa31.43■■■□□ 2.62
LIMD2-208ENST00000579814 EVI5LQ96CN4 794 aa31.43■■■□□ 2.62
LIMD2-208ENST00000579814 EMILIN3Q9NT22 766 aa31.43■■■□□ 2.62
LIMD2-208ENST00000579814 PTCH2Q9Y6C5 1203 aa31.43■■■□□ 2.62
LIMD2-208ENST00000579814 GSG1L2A8MUP6 293 aa31.42■■■□□ 2.62
LIMD2-208ENST00000579814 M0R2C6 588 aa31.42■■■□□ 2.62
LIMD2-208ENST00000579814 CTGFP29279 349 aa31.42■■■□□ 2.62
LIMD2-208ENST00000579814 CDK8P49336 464 aa31.42■■■□□ 2.62
LIMD2-208ENST00000579814 SEPT2Q15019 361 aa31.42■■■□□ 2.62
LIMD2-208ENST00000579814 CHD1LQ86WJ1 897 aa31.42■■■□□ 2.62
LIMD2-208ENST00000579814 CCDC17Q96LX7 622 aa31.42■■■□□ 2.62
LIMD2-208ENST00000579814 PHIPQ8WWQ0 1821 aa31.41■■■□□ 2.62
LIMD2-208ENST00000579814 APPP05067 770 aa31.41■■■□□ 2.62
LIMD2-208ENST00000579814 GUCY1A2P33402 732 aa31.41■■■□□ 2.62
LIMD2-208ENST00000579814 TMEM179Q6ZVK1 233 aa31.41■■■□□ 2.62
LIMD2-208ENST00000579814 NBPF11Q86T75 865 aa31.41■■■□□ 2.62
LIMD2-208ENST00000579814 KIAA1683Q9H0B3 1180 aa31.41■■■□□ 2.62
LIMD2-208ENST00000579814 SRRDQ9UH36 339 aa31.41■■■□□ 2.62
LIMD2-208ENST00000579814 NUCB1Q02818 461 aa31.4■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms