RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 DOCK2Q92608 1830 aa16.43■□□□□ 0.22
CDK5RAP3-213ENST00000579605 TRIM43BA6NCK2 446 aa16.43■□□□□ 0.22
CDK5RAP3-213ENST00000579605 HOXA7P31268 230 aaPredicted RBP16.43■□□□□ 0.22
CDK5RAP3-213ENST00000579605 BACE1P56817 501 aa16.43■□□□□ 0.22
CDK5RAP3-213ENST00000579605 ATP2B2Q01814 1243 aa16.43■□□□□ 0.22
CDK5RAP3-213ENST00000579605 ATP2B3Q16720 1220 aa16.43■□□□□ 0.22
CDK5RAP3-213ENST00000579605 ANO1Q5XXA6 986 aa16.43■□□□□ 0.22
CDK5RAP3-213ENST00000579605 ADAMTS19Q8TE59 1207 aa16.43■□□□□ 0.22
CDK5RAP3-213ENST00000579605 TRIM43Q96BQ3 446 aaPredicted RBP16.43■□□□□ 0.22
CDK5RAP3-213ENST00000579605 UTYO14607 1347 aa16.43■□□□□ 0.22
CDK5RAP3-213ENST00000579605 HOXD11P31277 338 aaPredicted RBP16.42■□□□□ 0.22
CDK5RAP3-213ENST00000579605 CYP2C19P33261 490 aa16.42■□□□□ 0.22
CDK5RAP3-213ENST00000579605 ZGPATQ8N5A5 531 aaKnown RBP16.42■□□□□ 0.22
CDK5RAP3-213ENST00000579605 FERMT2Q96AC1 680 aa16.42■□□□□ 0.22
CDK5RAP3-213ENST00000579605 UHRF1Q96T88 793 aaPredicted RBP16.42■□□□□ 0.22
CDK5RAP3-213ENST00000579605 SIL1Q9H173 461 aa16.42■□□□□ 0.22
CDK5RAP3-213ENST00000579605 KBTBD13C9JR72 458 aa16.41■□□□□ 0.22
CDK5RAP3-213ENST00000579605 MSCO60682 206 aa16.41■□□□□ 0.22
CDK5RAP3-213ENST00000579605 EPHB4P54760 987 aa16.41■□□□□ 0.22
CDK5RAP3-213ENST00000579605 RHBDL3P58872 404 aa16.41■□□□□ 0.22
CDK5RAP3-213ENST00000579605 ATG9AQ7Z3C6 839 aa16.41■□□□□ 0.22
CDK5RAP3-213ENST00000579605 ARRDC4Q8NCT1 418 aa16.41■□□□□ 0.22
CDK5RAP3-213ENST00000579605 TRPV1Q8NER1 839 aa16.41■□□□□ 0.22
CDK5RAP3-213ENST00000579605 ATXN2LQ8WWM7 1075 aaKnown RBP16.41■□□□□ 0.22
CDK5RAP3-213ENST00000579605 ASB2Q96Q27 587 aa16.41■□□□□ 0.22
CDK5RAP3-213ENST00000579605 PDLIM7Q9NR12 457 aa16.41■□□□□ 0.22
CDK5RAP3-213ENST00000579605 MROH7-TTC4A0A0A0MT08 1334 aa16.41■□□□□ 0.22
CDK5RAP3-213ENST00000579605 GLRX3O76003 335 aaKnown RBP16.4■□□□□ 0.22
CDK5RAP3-213ENST00000579605 DNAJB2P25686 324 aa16.4■□□□□ 0.22
CDK5RAP3-213ENST00000579605 JAG1P78504 1218 aa16.4■□□□□ 0.22
CDK5RAP3-213ENST00000579605 CCDC85BQ15834 202 aaPredicted RBP16.4■□□□□ 0.22
CDK5RAP3-213ENST00000579605 POTEEQ6S8J3 1075 aa16.4■□□□□ 0.22
CDK5RAP3-213ENST00000579605 FAM163AQ96GL9 167 aaPredicted RBP16.4■□□□□ 0.22
CDK5RAP3-213ENST00000579605 WDR18Q9BV38 432 aa16.4■□□□□ 0.22
CDK5RAP3-213ENST00000579605 ZNF576Q9H609 170 aa16.4■□□□□ 0.22
CDK5RAP3-213ENST00000579605 CEP126Q9P2H0 1117 aa16.4■□□□□ 0.22
CDK5RAP3-213ENST00000579605 SEMA3EO15041 775 aa16.39■□□□□ 0.21
CDK5RAP3-213ENST00000579605 ADORA1P30542 326 aa16.39■□□□□ 0.21
CDK5RAP3-213ENST00000579605 ADCYAP1R1P41586 468 aa16.39■□□□□ 0.21
CDK5RAP3-213ENST00000579605 RFX5P48382 616 aaPredicted RBP16.39■□□□□ 0.21
CDK5RAP3-213ENST00000579605 MECOMQ03112 1051 aa16.39■□□□□ 0.21
CDK5RAP3-213ENST00000579605 SPTY2D1Q68D10 685 aaPredicted RBP16.39■□□□□ 0.21
CDK5RAP3-213ENST00000579605 IL27Q8NEV9 243 aa16.39■□□□□ 0.21
CDK5RAP3-213ENST00000579605 NPLOC4Q8TAT6 608 aa16.39■□□□□ 0.21
CDK5RAP3-213ENST00000579605 THEGQ9P2T0 379 aa16.39■□□□□ 0.21
CDK5RAP3-213ENST00000579605 GPR75-ASB3A0A0A6YYF3 556 aa16.38■□□□□ 0.21
CDK5RAP3-213ENST00000579605 C19orf81C9J6K1 198 aa16.38■□□□□ 0.21
CDK5RAP3-213ENST00000579605 USP17L10C9JJH3 530 aa16.38■□□□□ 0.21
CDK5RAP3-213ENST00000579605 ITGB8P26012 769 aa16.38■□□□□ 0.21
CDK5RAP3-213ENST00000579605 MRPS5P82675 430 aaKnown RBP16.38■□□□□ 0.21
CDK5RAP3-213ENST00000579605 TLE2Q04725 743 aa16.38■□□□□ 0.21
CDK5RAP3-213ENST00000579605 SHROOM1Q2M3G4 852 aaPredicted RBP16.38■□□□□ 0.21
CDK5RAP3-213ENST00000579605 CCDC102BQ68D86 513 aa16.38■□□□□ 0.21
CDK5RAP3-213ENST00000579605 GAS2L1Q99501 681 aaPredicted RBP16.38■□□□□ 0.21
CDK5RAP3-213ENST00000579605 LOC285556D6RIA3 1793 aa16.38■□□□□ 0.21
CDK5RAP3-213ENST00000579605 MAST2Q6P0Q8 1798 aa16.37■□□□□ 0.21
CDK5RAP3-213ENST00000579605 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.37■□□□□ 0.21
CDK5RAP3-213ENST00000579605 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.37■□□□□ 0.21
CDK5RAP3-213ENST00000579605 SLC15A5A6NIM6 579 aa16.37■□□□□ 0.21
CDK5RAP3-213ENST00000579605 GDF11O95390 407 aa16.37■□□□□ 0.21
CDK5RAP3-213ENST00000579605 PTPREP23469 700 aa16.37■□□□□ 0.21
CDK5RAP3-213ENST00000579605 RASGRF1Q13972 1273 aa16.37■□□□□ 0.21
CDK5RAP3-213ENST00000579605 ERICH6Q7L0X2 663 aa16.37■□□□□ 0.21
CDK5RAP3-213ENST00000579605 TIFAQ96CG3 184 aa16.37■□□□□ 0.21
CDK5RAP3-213ENST00000579605 NPM3O75607 178 aaKnown RBP16.36■□□□□ 0.21
CDK5RAP3-213ENST00000579605 CNMDO75829 334 aa16.36■□□□□ 0.21
CDK5RAP3-213ENST00000579605 ASNSP08243 561 aa16.36■□□□□ 0.21
CDK5RAP3-213ENST00000579605 RAG1P15918 1043 aa16.36■□□□□ 0.21
CDK5RAP3-213ENST00000579605 CCNA1P78396 465 aa16.36■□□□□ 0.21
CDK5RAP3-213ENST00000579605 ZYXQ15942 572 aaKnown RBP16.36■□□□□ 0.21
CDK5RAP3-213ENST00000579605 TEX11Q8IYF3 940 aa16.36■□□□□ 0.21
CDK5RAP3-213ENST00000579605 GTF3C2Q8WUA4 911 aaPredicted RBP16.36■□□□□ 0.21
CDK5RAP3-213ENST00000579605 NECAB3Q96P71 396 aaPredicted RBP16.36■□□□□ 0.21
CDK5RAP3-213ENST00000579605 PRDM12Q9H4Q4 367 aa16.36■□□□□ 0.21
CDK5RAP3-213ENST00000579605 EMILIN3Q9NT22 766 aa16.36■□□□□ 0.21
CDK5RAP3-213ENST00000579605 HERC5Q9UII4 1024 aaKnown RBP16.36■□□□□ 0.21
CDK5RAP3-213ENST00000579605 IVNS1ABPQ9Y6Y0 642 aa16.36■□□□□ 0.21
CDK5RAP3-213ENST00000579605 LTBP2Q14767 1821 aa16.35■□□□□ 0.21
CDK5RAP3-213ENST00000579605 CCDC129Q6ZRS4 1044 aa16.35■□□□□ 0.21
CDK5RAP3-213ENST00000579605 ZNF384Q8TF68 577 aa16.35■□□□□ 0.21
CDK5RAP3-213ENST00000579605 USP44Q9H0E7 712 aa16.35■□□□□ 0.21
CDK5RAP3-213ENST00000579605 RABGAP1Q9Y3P9 1069 aa16.35■□□□□ 0.21
CDK5RAP3-213ENST00000579605 TACC3Q9Y6A5 838 aa16.35■□□□□ 0.21
CDK5RAP3-213ENST00000579605 CYBAP13498 195 aa16.34■□□□□ 0.21
CDK5RAP3-213ENST00000579605 IGFBP4P22692 258 aa16.34■□□□□ 0.21
CDK5RAP3-213ENST00000579605 TIMM10P62072 90 aa16.34■□□□□ 0.21
CDK5RAP3-213ENST00000579605 FPGSQ05932 587 aa16.34■□□□□ 0.21
CDK5RAP3-213ENST00000579605 SNX17Q15036 470 aa16.34■□□□□ 0.21
CDK5RAP3-213ENST00000579605 PRAMEF19Q5SWL8 479 aa16.34■□□□□ 0.21
CDK5RAP3-213ENST00000579605 DPP9Q86TI2 863 aa16.34■□□□□ 0.21
CDK5RAP3-213ENST00000579605 WDR63Q8IWG1 891 aa16.34■□□□□ 0.21
CDK5RAP3-213ENST00000579605 TRIM34Q9BYJ4 488 aa16.34■□□□□ 0.21
CDK5RAP3-213ENST00000579605 PI4KBQ9UBF8 816 aa16.34■□□□□ 0.21
CDK5RAP3-213ENST00000579605 MYH2Q9UKX2 1941 aa16.33■□□□□ 0.21
CDK5RAP3-213ENST00000579605 LDHCP07864 332 aa16.33■□□□□ 0.2
CDK5RAP3-213ENST00000579605 CLTBP09497 229 aa16.33■□□□□ 0.2
CDK5RAP3-213ENST00000579605 HOXC6P09630 235 aa16.33■□□□□ 0.2
CDK5RAP3-213ENST00000579605 LRRC41Q15345 812 aa16.33■□□□□ 0.2
CDK5RAP3-213ENST00000579605 CCDC184Q52MB2 194 aa16.33■□□□□ 0.2
CDK5RAP3-213ENST00000579605 USP17L2Q6R6M4 530 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms