RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 SHMT1P34896 483 aa12□□□□□ -0.49
MKS1-208ENST00000579358 TDO2P48775 406 aa12□□□□□ -0.49
MKS1-208ENST00000579358 CCL15Q16663 113 aa12□□□□□ -0.49
MKS1-208ENST00000579358 CERKLQ49MI3 558 aaPredicted RBP12□□□□□ -0.49
MKS1-208ENST00000579358 OTUD7BQ6GQQ9 843 aa12□□□□□ -0.49
MKS1-208ENST00000579358 CCDC129Q6ZRS4 1044 aa12□□□□□ -0.49
MKS1-208ENST00000579358 C16orf86Q6ZW13 317 aa12□□□□□ -0.49
MKS1-208ENST00000579358 IFNL3Q8IZI9 196 aa12□□□□□ -0.49
MKS1-208ENST00000579358 BRI3BPQ8WY22 251 aa12□□□□□ -0.49
MKS1-208ENST00000579358 NAPBQ9H115 298 aa12□□□□□ -0.49
MKS1-208ENST00000579358 AS3MTQ9HBK9 375 aa12□□□□□ -0.49
MKS1-208ENST00000579358 ZCCHC17Q9NP64 241 aaKnown RBP12□□□□□ -0.49
MKS1-208ENST00000579358 RNF186Q9NXI6 227 aa12□□□□□ -0.49
MKS1-208ENST00000579358 ZBTB21Q9ULJ3 1066 aa12□□□□□ -0.49
MKS1-208ENST00000579358 ZHX2Q9Y6X8 837 aa12□□□□□ -0.49
MKS1-208ENST00000579358 CCDC171Q6TFL3 1326 aa12□□□□□ -0.49
MKS1-208ENST00000579358 LAMB1P07942 1786 aa12□□□□□ -0.49
MKS1-208ENST00000579358 A0A0G2JLL6 359 aaPredicted RBP11.99□□□□□ -0.49
MKS1-208ENST00000579358 IGF2BP3O00425 579 aaKnown RBP eCLIP11.99□□□□□ -0.49
MKS1-208ENST00000579358 FOXP2O15409 715 aa11.99□□□□□ -0.49
MKS1-208ENST00000579358 GDF11O95390 407 aa11.99□□□□□ -0.49
MKS1-208ENST00000579358 HSPA8P11142 646 aaKnown RBP11.99□□□□□ -0.49
MKS1-208ENST00000579358 EVX2Q03828 476 aa11.99□□□□□ -0.49
MKS1-208ENST00000579358 PRRT2Q7Z6L0 340 aaPredicted RBP11.99□□□□□ -0.49
MKS1-208ENST00000579358 WDR18Q9BV38 432 aa11.99□□□□□ -0.49
MKS1-208ENST00000579358 ZMYM6O95789 1325 aa11.99□□□□□ -0.49
MKS1-208ENST00000579358 RAD50Q92878 1312 aa11.99□□□□□ -0.49
MKS1-208ENST00000579358 DOCK1Q14185 1865 aa11.98□□□□□ -0.49
MKS1-208ENST00000579358 CYP2D7A0A087X1C5 515 aa11.98□□□□□ -0.49
MKS1-208ENST00000579358 TRPA1O75762 1119 aa11.98□□□□□ -0.49
MKS1-208ENST00000579358 GH2P01242 217 aa11.98□□□□□ -0.49
MKS1-208ENST00000579358 CDK8P49336 464 aa11.98□□□□□ -0.49
MKS1-208ENST00000579358 JAG1P78504 1218 aa11.98□□□□□ -0.49
MKS1-208ENST00000579358 ALX1Q15699 326 aa11.98□□□□□ -0.49
MKS1-208ENST00000579358 ABCB5Q2M3G0 1257 aa11.98□□□□□ -0.49
MKS1-208ENST00000579358 NOM1Q5C9Z4 860 aaKnown RBP11.98□□□□□ -0.49
MKS1-208ENST00000579358 FASTKD5Q7L8L6 764 aaKnown RBP11.98□□□□□ -0.49
MKS1-208ENST00000579358 ZNF589Q86UQ0 364 aaPredicted RBP11.98□□□□□ -0.49
MKS1-208ENST00000579358 SLC44A5Q8NCS7 719 aa11.98□□□□□ -0.49
MKS1-208ENST00000579358 ZNF280CQ8ND82 737 aa11.98□□□□□ -0.49
MKS1-208ENST00000579358 DYNLL2Q96FJ2 89 aa11.98□□□□□ -0.49
MKS1-208ENST00000579358 CCDC17Q96LX7 622 aa11.98□□□□□ -0.49
MKS1-208ENST00000579358 PTPN18Q99952 460 aa11.98□□□□□ -0.49
MKS1-208ENST00000579358 CABP5Q9NP86 173 aa11.98□□□□□ -0.49
MKS1-208ENST00000579358 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.98□□□□□ -0.49
MKS1-208ENST00000579358 TRIM75PA6NK02 468 aa11.97□□□□□ -0.49
MKS1-208ENST00000579358 BTBD19C9JJ37 291 aa11.97□□□□□ -0.49
MKS1-208ENST00000579358 HSPD1P10809 573 aaKnown RBP11.97□□□□□ -0.49
MKS1-208ENST00000579358 MOGSQ13724 837 aa11.97□□□□□ -0.49
MKS1-208ENST00000579358 BMP2KLQ5H9B9 411 aa11.97□□□□□ -0.49
MKS1-208ENST00000579358 SH3D19Q5HYK7 790 aa11.97□□□□□ -0.49
MKS1-208ENST00000579358 VPS53Q5VIR6 699 aa11.97□□□□□ -0.49
MKS1-208ENST00000579358 CWC27Q6UX04 472 aaKnown RBP11.97□□□□□ -0.49
MKS1-208ENST00000579358 TMEM179Q6ZVK1 233 aa11.97□□□□□ -0.49
MKS1-208ENST00000579358 ANKRD23Q86SG2 305 aa11.97□□□□□ -0.49
MKS1-208ENST00000579358 CCDC84Q86UT8 332 aaPredicted RBP11.97□□□□□ -0.49
MKS1-208ENST00000579358 PROCA1Q8NCQ7 364 aaPredicted RBP11.97□□□□□ -0.49
MKS1-208ENST00000579358 RUFY2Q8WXA3 655 aa11.97□□□□□ -0.49
MKS1-208ENST00000579358 ZNF287Q9HBT7 754 aa11.97□□□□□ -0.49
MKS1-208ENST00000579358 PRDM10Q9NQV6 1147 aa11.97□□□□□ -0.49
MKS1-208ENST00000579358 MYH1P12882 1939 aa11.96□□□□□ -0.49
MKS1-208ENST00000579358 AK9Q5TCS8 1911 aa11.96□□□□□ -0.49
MKS1-208ENST00000579358 MINDY4BA8MYZ0 360 aa11.96□□□□□ -0.49
MKS1-208ENST00000579358 C19orf81C9J6K1 198 aa11.96□□□□□ -0.49
MKS1-208ENST00000579358 SMIM22K7EJ46 135 aa11.96□□□□□ -0.49
MKS1-208ENST00000579358 SLC3A2P08195 630 aaKnown RBP11.96□□□□□ -0.49
MKS1-208ENST00000579358 CHMLP26374 656 aa11.96□□□□□ -0.49
MKS1-208ENST00000579358 LBX1P52954 281 aa11.96□□□□□ -0.49
MKS1-208ENST00000579358 PPARAQ07869 468 aa11.96□□□□□ -0.49
MKS1-208ENST00000579358 SPP2Q13103 211 aa11.96□□□□□ -0.49
MKS1-208ENST00000579358 SHROOM1Q2M3G4 852 aaPredicted RBP11.96□□□□□ -0.49
MKS1-208ENST00000579358 FAM43AQ8N2R8 423 aa11.96□□□□□ -0.49
MKS1-208ENST00000579358 DSCC1Q9BVC3 393 aa11.96□□□□□ -0.49
MKS1-208ENST00000579358 ANAPC4Q9UJX5 808 aa11.96□□□□□ -0.49
MKS1-208ENST00000579358 SLC45A1Q9Y2W3 748 aa11.96□□□□□ -0.49
MKS1-208ENST00000579358 USP17L10C9JJH3 530 aa11.95□□□□□ -0.5
MKS1-208ENST00000579358 FGAP02671 866 aa11.95□□□□□ -0.5
MKS1-208ENST00000579358 GUCY1A2P33402 732 aa11.95□□□□□ -0.5
MKS1-208ENST00000579358 BACE1P56817 501 aa11.95□□□□□ -0.5
MKS1-208ENST00000579358 PDE4BQ07343 736 aa11.95□□□□□ -0.5
MKS1-208ENST00000579358 MTMR2Q13614 643 aa11.95□□□□□ -0.5
MKS1-208ENST00000579358 RAB3GAP1Q15042 981 aa11.95□□□□□ -0.5
MKS1-208ENST00000579358 MKNK2Q9HBH9 465 aa11.95□□□□□ -0.5
MKS1-208ENST00000579358 TSKSQ9UJT2 592 aa11.95□□□□□ -0.5
MKS1-208ENST00000579358 AGTPBP1Q9UPW5 1226 aa11.95□□□□□ -0.5
MKS1-208ENST00000579358 PDHXO00330 501 aa11.94□□□□□ -0.5
MKS1-208ENST00000579358 MPHOSPH10O00566 681 aaKnown RBP11.94□□□□□ -0.5
MKS1-208ENST00000579358 TBC1D8O95759 1140 aa11.94□□□□□ -0.5
MKS1-208ENST00000579358 AKR1B1P15121 316 aa11.94□□□□□ -0.5
MKS1-208ENST00000579358 RASA1P20936 1047 aa11.94□□□□□ -0.5
MKS1-208ENST00000579358 USP14P54578 494 aa11.94□□□□□ -0.5
MKS1-208ENST00000579358 HMGCS2P54868 508 aa11.94□□□□□ -0.5
MKS1-208ENST00000579358 CRHR2Q13324 411 aa11.94□□□□□ -0.5
MKS1-208ENST00000579358 SEPT2Q15019 361 aa11.94□□□□□ -0.5
MKS1-208ENST00000579358 TAF1CQ15572 869 aaPredicted RBP11.94□□□□□ -0.5
MKS1-208ENST00000579358 GPAT2Q6NUI2 795 aa11.94□□□□□ -0.5
MKS1-208ENST00000579358 GADL1Q6ZQY3 521 aa11.94□□□□□ -0.5
MKS1-208ENST00000579358 SKAP1Q86WV1 359 aa11.94□□□□□ -0.5
MKS1-208ENST00000579358 C12orf42Q96LP6 360 aa11.94□□□□□ -0.5
MKS1-208ENST00000579358 KIAA1683Q9H0B3 1180 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms