RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 CHD7Q9P2D1 2997 aa13.96□□□□□ -0.17
SUPT4H1-203ENST00000579289 BDP1A6H8Y1 2624 aa13.95□□□□□ -0.18
SUPT4H1-203ENST00000579289 TRIM43BA6NCK2 446 aa13.95□□□□□ -0.18
SUPT4H1-203ENST00000579289 CIAO1O76071 339 aa13.95□□□□□ -0.18
SUPT4H1-203ENST00000579289 ATN1P54259 1190 aaPredicted RBP13.95□□□□□ -0.18
SUPT4H1-203ENST00000579289 ERVK-9P63128 1117 aa13.95□□□□□ -0.18
SUPT4H1-203ENST00000579289 ERVK-24P63145 666 aa13.95□□□□□ -0.18
SUPT4H1-203ENST00000579289 MECOMQ03112 1051 aa13.95□□□□□ -0.18
SUPT4H1-203ENST00000579289 PABPC4Q13310 644 aaKnown RBP eCLIP13.95□□□□□ -0.18
SUPT4H1-203ENST00000579289 MTMR2Q13614 643 aa13.95□□□□□ -0.18
SUPT4H1-203ENST00000579289 SH3RF1Q7Z6J0 888 aa13.95□□□□□ -0.18
SUPT4H1-203ENST00000579289 TRIM43Q96BQ3 446 aaPredicted RBP13.95□□□□□ -0.18
SUPT4H1-203ENST00000579289 EMILIN3Q9NT22 766 aa13.95□□□□□ -0.18
SUPT4H1-203ENST00000579289 HOXC6P09630 235 aa13.94□□□□□ -0.18
SUPT4H1-203ENST00000579289 MAPK4P31152 587 aa13.94□□□□□ -0.18
SUPT4H1-203ENST00000579289 NPLOC4Q8TAT6 608 aa13.94□□□□□ -0.18
SUPT4H1-203ENST00000579289 LPAR1Q92633 364 aa13.94□□□□□ -0.18
SUPT4H1-203ENST00000579289 SYMPKQ92797 1274 aaKnown RBP13.94□□□□□ -0.18
SUPT4H1-203ENST00000579289 BADQ92934 168 aa13.94□□□□□ -0.18
SUPT4H1-203ENST00000579289 APBA2Q99767 749 aa13.94□□□□□ -0.18
SUPT4H1-203ENST00000579289 MRS2Q9HD23 443 aa13.94□□□□□ -0.18
SUPT4H1-203ENST00000579289 DDX20Q9UHI6 824 aaKnown RBP13.94□□□□□ -0.18
SUPT4H1-203ENST00000579289 FBXO3Q9UK99 471 aa13.94□□□□□ -0.18
SUPT4H1-203ENST00000579289 TNFRSF10AO00220 468 aa13.93□□□□□ -0.18
SUPT4H1-203ENST00000579289 DNM1LO00429 736 aa13.93□□□□□ -0.18
SUPT4H1-203ENST00000579289 RGS2P41220 211 aa13.93□□□□□ -0.18
SUPT4H1-203ENST00000579289 MAP2K5Q13163 448 aa13.93□□□□□ -0.18
SUPT4H1-203ENST00000579289 GRIN2CQ14957 1233 aa13.93□□□□□ -0.18
SUPT4H1-203ENST00000579289 TJAP1Q5JTD0 557 aa13.93□□□□□ -0.18
SUPT4H1-203ENST00000579289 SLC39A5Q6ZMH5 540 aa13.93□□□□□ -0.18
SUPT4H1-203ENST00000579289 PLEKHH3Q7Z736 793 aa13.93□□□□□ -0.18
SUPT4H1-203ENST00000579289 NSUN4Q96CB9 384 aaKnown RBP13.93□□□□□ -0.18
SUPT4H1-203ENST00000579289 PDLIM7Q9NR12 457 aa13.93□□□□□ -0.18
SUPT4H1-203ENST00000579289 CYBAP13498 195 aa13.92□□□□□ -0.18
SUPT4H1-203ENST00000579289 TIMM10P62072 90 aa13.92□□□□□ -0.18
SUPT4H1-203ENST00000579289 EDC3Q96F86 508 aaKnown RBP13.92□□□□□ -0.18
SUPT4H1-203ENST00000579289 LBHD1Q9BQE6 289 aaPredicted RBP13.92□□□□□ -0.18
SUPT4H1-203ENST00000579289 PA2G4Q9UQ80 394 aaKnown RBP13.92□□□□□ -0.18
SUPT4H1-203ENST00000579289 CDK5RAP2Q96SN8 1893 aa13.91□□□□□ -0.18
SUPT4H1-203ENST00000579289 TMEM265A0A087WTH1 108 aa13.91□□□□□ -0.18
SUPT4H1-203ENST00000579289 FOSL2P15408 326 aa13.91□□□□□ -0.18
SUPT4H1-203ENST00000579289 HOXD11P31277 338 aaPredicted RBP13.91□□□□□ -0.18
SUPT4H1-203ENST00000579289 PLA2G5P39877 138 aa13.91□□□□□ -0.18
SUPT4H1-203ENST00000579289 C1orf53Q5VUE5 145 aa13.91□□□□□ -0.18
SUPT4H1-203ENST00000579289 PI16Q6UXB8 463 aa13.91□□□□□ -0.18
SUPT4H1-203ENST00000579289 ZGPATQ8N5A5 531 aaKnown RBP13.91□□□□□ -0.18
SUPT4H1-203ENST00000579289 SIL1Q9H173 461 aa13.91□□□□□ -0.18
SUPT4H1-203ENST00000579289 GNL3LQ9NVN8 582 aaKnown RBP13.91□□□□□ -0.18
SUPT4H1-203ENST00000579289 HERC5Q9UII4 1024 aaKnown RBP13.91□□□□□ -0.18
SUPT4H1-203ENST00000579289 ZNF521Q96K83 1311 aa13.9□□□□□ -0.18
SUPT4H1-203ENST00000579289 MAP4K4O95819 1239 aaPredicted RBP13.9□□□□□ -0.18
SUPT4H1-203ENST00000579289 PTPREP23469 700 aa13.9□□□□□ -0.18
SUPT4H1-203ENST00000579289 IRX3P78415 501 aaPredicted RBP13.9□□□□□ -0.18
SUPT4H1-203ENST00000579289 GRB14Q14449 540 aa13.9□□□□□ -0.18
SUPT4H1-203ENST00000579289 GJC2Q5T442 439 aaPredicted RBP13.9□□□□□ -0.18
SUPT4H1-203ENST00000579289 DZIP1Q86YF9 867 aaKnown RBP13.9□□□□□ -0.18
SUPT4H1-203ENST00000579289 C12orf42Q96LP6 360 aa13.9□□□□□ -0.18
SUPT4H1-203ENST00000579289 HMG20BQ9P0W2 317 aa13.9□□□□□ -0.18
SUPT4H1-203ENST00000579289 BTBD7Q9P203 1132 aa13.9□□□□□ -0.18
SUPT4H1-203ENST00000579289 CEP126Q9P2H0 1117 aa13.9□□□□□ -0.18
SUPT4H1-203ENST00000579289 ABCF2Q9UG63 623 aa13.9□□□□□ -0.18
SUPT4H1-203ENST00000579289 SALL2Q9Y467 1007 aaPredicted RBP13.9□□□□□ -0.18
SUPT4H1-203ENST00000579289 C19orf81C9J6K1 198 aa13.89□□□□□ -0.19
SUPT4H1-203ENST00000579289 USP17L10C9JJH3 530 aa13.89□□□□□ -0.19
SUPT4H1-203ENST00000579289 CYP2C19P33261 490 aa13.89□□□□□ -0.19
SUPT4H1-203ENST00000579289 IL15P40933 162 aaPredicted RBP13.89□□□□□ -0.19
SUPT4H1-203ENST00000579289 TRIM60Q495X7 471 aa13.89□□□□□ -0.19
SUPT4H1-203ENST00000579289 LBX2Q6XYB7 198 aa13.89□□□□□ -0.19
SUPT4H1-203ENST00000579289 TBC1D9Q6ZT07 1266 aa13.89□□□□□ -0.19
SUPT4H1-203ENST00000579289 AS3MTQ9HBK9 375 aa13.89□□□□□ -0.19
SUPT4H1-203ENST00000579289 COPRSQ9NQ92 184 aa13.89□□□□□ -0.19
SUPT4H1-203ENST00000579289 RABGAP1Q9Y3P9 1069 aa13.89□□□□□ -0.19
SUPT4H1-203ENST00000579289 NDUFB9Q9Y6M9 179 aa13.89□□□□□ -0.19
SUPT4H1-203ENST00000579289 FOCADQ5VW36 1801 aa13.89□□□□□ -0.19
SUPT4H1-203ENST00000579289 NCOR1O75376 2440 aa13.88□□□□□ -0.19
SUPT4H1-203ENST00000579289 SLC15A5A6NIM6 579 aa13.88□□□□□ -0.19
SUPT4H1-203ENST00000579289 ASNSP08243 561 aa13.88□□□□□ -0.19
SUPT4H1-203ENST00000579289 PDE3AQ14432 1141 aa13.88□□□□□ -0.19
SUPT4H1-203ENST00000579289 SH3RF3Q8TEJ3 882 aaPredicted RBP13.88□□□□□ -0.19
SUPT4H1-203ENST00000579289 XAGE2Q96GT9 111 aa13.88□□□□□ -0.19
SUPT4H1-203ENST00000579289 PAGR1Q9BTK6 254 aa13.88□□□□□ -0.19
SUPT4H1-203ENST00000579289 PI4KBQ9UBF8 816 aa13.88□□□□□ -0.19
SUPT4H1-203ENST00000579289 ZBTB21Q9ULJ3 1066 aa13.88□□□□□ -0.19
SUPT4H1-203ENST00000579289 ATP11BQ9Y2G3 1177 aa13.88□□□□□ -0.19
SUPT4H1-203ENST00000579289 PTPRCP08575 1304 aa13.88□□□□□ -0.19
SUPT4H1-203ENST00000579289 ZNF236Q9UL36 1845 aa13.87□□□□□ -0.19
SUPT4H1-203ENST00000579289 MSCO60682 206 aa13.87□□□□□ -0.19
SUPT4H1-203ENST00000579289 CATSPERGQ6ZRH7 1159 aa13.87□□□□□ -0.19
SUPT4H1-203ENST00000579289 ADGRA1Q86SQ6 560 aa13.87□□□□□ -0.19
SUPT4H1-203ENST00000579289 SLF2Q8IX21 1173 aa13.87□□□□□ -0.19
SUPT4H1-203ENST00000579289 SSH1Q8WYL5 1049 aa13.87□□□□□ -0.19
SUPT4H1-203ENST00000579289 A0A1B0GUL7 405 aa13.86□□□□□ -0.19
SUPT4H1-203ENST00000579289 GDF11O95390 407 aa13.86□□□□□ -0.19
SUPT4H1-203ENST00000579289 PPP4CP60510 307 aa13.86□□□□□ -0.19
SUPT4H1-203ENST00000579289 MFSD14CQ5VZR4 134 aa13.86□□□□□ -0.19
SUPT4H1-203ENST00000579289 SPTY2D1Q68D10 685 aaPredicted RBP13.86□□□□□ -0.19
SUPT4H1-203ENST00000579289 ERICH6Q7L0X2 663 aa13.86□□□□□ -0.19
SUPT4H1-203ENST00000579289 GTF3C2Q8WUA4 911 aaPredicted RBP13.86□□□□□ -0.19
SUPT4H1-203ENST00000579289 GINM1Q9NU53 330 aa13.86□□□□□ -0.19
SUPT4H1-203ENST00000579289 TMOD4Q9NZQ9 345 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms