RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 LAMA3Q16787 3333 aa25.76■■□□□ 1.71
TSEN54-205ENST00000578415 TMOD4Q9NZQ9 345 aa25.76■■□□□ 1.71
TSEN54-205ENST00000578415 PALD1Q9ULE6 856 aa25.76■■□□□ 1.71
TSEN54-205ENST00000578415 ALPK3Q96L96 1907 aa25.75■■□□□ 1.71
TSEN54-205ENST00000578415 MAST2Q6P0Q8 1798 aa25.75■■□□□ 1.71
TSEN54-205ENST00000578415 FOXP4Q8IVH2 680 aaPredicted RBP25.75■■□□□ 1.71
TSEN54-205ENST00000578415 TMEM57Q8N5G2 664 aa25.75■■□□□ 1.71
TSEN54-205ENST00000578415 PLXNB2O15031 1838 aa25.74■■□□□ 1.71
TSEN54-205ENST00000578415 GDF11O95390 407 aa25.74■■□□□ 1.71
TSEN54-205ENST00000578415 HERVK_113P62684 666 aa25.74■■□□□ 1.71
TSEN54-205ENST00000578415 CCDC158Q5M9N0 1113 aa25.74■■□□□ 1.71
TSEN54-205ENST00000578415 MAP3K21Q5TCX8 1036 aa25.74■■□□□ 1.71
TSEN54-205ENST00000578415 ZBTB21Q9ULJ3 1066 aa25.74■■□□□ 1.71
TSEN54-205ENST00000578415 C19orf81C9J6K1 198 aa25.73■■□□□ 1.71
TSEN54-205ENST00000578415 CCER2I3L3R5 266 aa25.73■■□□□ 1.71
TSEN54-205ENST00000578415 CYP2B6P20813 491 aa25.73■■□□□ 1.71
TSEN54-205ENST00000578415 ZAP70P43403 619 aa25.73■■□□□ 1.71
TSEN54-205ENST00000578415 C7orf61Q8IZ16 206 aa25.73■■□□□ 1.71
TSEN54-205ENST00000578415 CRACR2BQ8N4Y2 399 aaPredicted RBP25.73■■□□□ 1.71
TSEN54-205ENST00000578415 GPRC5AQ8NFJ5 357 aa25.73■■□□□ 1.71
TSEN54-205ENST00000578415 SSH3Q8TE77 659 aa25.73■■□□□ 1.71
TSEN54-205ENST00000578415 LRCH3Q96II8 777 aa25.73■■□□□ 1.71
TSEN54-205ENST00000578415 ZNF512BQ96KM6 892 aaPredicted RBP25.73■■□□□ 1.71
TSEN54-205ENST00000578415 GDF15Q99988 308 aa25.73■■□□□ 1.71
TSEN54-205ENST00000578415 NBPF3Q9H094 633 aa25.73■■□□□ 1.71
TSEN54-205ENST00000578415 PIH1D3Q9NQM4 214 aaKnown RBP25.73■■□□□ 1.71
TSEN54-205ENST00000578415 USP17L10C9JJH3 530 aa25.72■■□□□ 1.71
TSEN54-205ENST00000578415 GINM1Q9NU53 330 aa25.72■■□□□ 1.71
TSEN54-205ENST00000578415 RBPJLQ9UBG7 517 aa25.72■■□□□ 1.71
TSEN54-205ENST00000578415 SAP30BPQ9UHR5 308 aaKnown RBP25.72■■□□□ 1.71
TSEN54-205ENST00000578415 OGDHLQ9ULD0 1010 aa25.72■■□□□ 1.71
TSEN54-205ENST00000578415 XRCC5P13010 732 aaKnown RBP25.71■■□□□ 1.71
TSEN54-205ENST00000578415 DYNLL1P63167 89 aaKnown RBP25.71■■□□□ 1.71
TSEN54-205ENST00000578415 OS9Q13438 667 aaPredicted RBP25.71■■□□□ 1.71
TSEN54-205ENST00000578415 POTEEQ6S8J3 1075 aa25.71■■□□□ 1.71
TSEN54-205ENST00000578415 SOCS4Q8WXH5 440 aa25.71■■□□□ 1.71
TSEN54-205ENST00000578415 NUDT12Q9BQG2 462 aa25.71■■□□□ 1.71
TSEN54-205ENST00000578415 TRIM34Q9BYJ4 488 aa25.71■■□□□ 1.71
TSEN54-205ENST00000578415 ZMYND8Q9ULU4 1186 aaPredicted RBP25.71■■□□□ 1.71
TSEN54-205ENST00000578415 PRKAR2AP13861 404 aaKnown RBP25.7■■□□□ 1.7
TSEN54-205ENST00000578415 ATP8B2P98198 1209 aa25.7■■□□□ 1.7
TSEN54-205ENST00000578415 Q3C1V9 767 aa25.7■■□□□ 1.7
TSEN54-205ENST00000578415 C11orf49Q9H6J7 331 aa25.7■■□□□ 1.7
TSEN54-205ENST00000578415 EMILIN3Q9NT22 766 aa25.7■■□□□ 1.7
TSEN54-205ENST00000578415 DBNLQ9UJU6 430 aaKnown RBP25.7■■□□□ 1.7
TSEN54-205ENST00000578415 IGSF3O75054 1194 aa25.69■■□□□ 1.7
TSEN54-205ENST00000578415 SURF6O75683 361 aaKnown RBP25.69■■□□□ 1.7
TSEN54-205ENST00000578415 BMP8BP34820 402 aa25.69■■□□□ 1.7
TSEN54-205ENST00000578415 ERVK-9P63128 1117 aa25.69■■□□□ 1.7
TSEN54-205ENST00000578415 ERVK-24P63145 666 aa25.69■■□□□ 1.7
TSEN54-205ENST00000578415 USP6NLQ92738 828 aa25.69■■□□□ 1.7
TSEN54-205ENST00000578415 PORCNQ9H237 461 aa25.69■■□□□ 1.7
TSEN54-205ENST00000578415 TLR7Q9NYK1 1049 aaKnown RBP25.69■■□□□ 1.7
TSEN54-205ENST00000578415 CDK5RAP2Q96SN8 1893 aa25.68■■□□□ 1.7
TSEN54-205ENST00000578415 FOCADQ5VW36 1801 aa25.68■■□□□ 1.7
TSEN54-205ENST00000578415 HLA-DOAP06340 250 aa25.68■■□□□ 1.7
TSEN54-205ENST00000578415 MAPK4P31152 587 aa25.68■■□□□ 1.7
TSEN54-205ENST00000578415 ZKSCAN2Q63HK3 967 aa25.68■■□□□ 1.7
TSEN54-205ENST00000578415 C1orf115Q9H7X2 142 aa25.68■■□□□ 1.7
TSEN54-205ENST00000578415 CYP7A1P22680 504 aa25.67■■□□□ 1.7
TSEN54-205ENST00000578415 DDX60LQ5H9U9 1706 aaKnown RBP25.67■■□□□ 1.7
TSEN54-205ENST00000578415 GPR142Q7Z601 462 aa25.67■■□□□ 1.7
TSEN54-205ENST00000578415 NOP58Q9Y2X3 529 aaKnown RBP25.67■■□□□ 1.7
TSEN54-205ENST00000578415 PFASO15067 1338 aa25.66■■□□□ 1.7
TSEN54-205ENST00000578415 GH2P01242 217 aa25.66■■□□□ 1.7
TSEN54-205ENST00000578415 ZKSCAN1P17029 563 aaPredicted RBP25.66■■□□□ 1.7
TSEN54-205ENST00000578415 SYN1P17600 705 aa25.66■■□□□ 1.7
TSEN54-205ENST00000578415 CACNB2Q08289 660 aaPredicted RBP25.66■■□□□ 1.7
TSEN54-205ENST00000578415 PDE3AQ14432 1141 aa25.66■■□□□ 1.7
TSEN54-205ENST00000578415 CCL14Q16627 93 aa25.66■■□□□ 1.7
TSEN54-205ENST00000578415 MORN1Q5T089 497 aa25.66■■□□□ 1.7
TSEN54-205ENST00000578415 USP17L2Q6R6M4 530 aa25.66■■□□□ 1.7
TSEN54-205ENST00000578415 GTF3C2Q8WUA4 911 aaPredicted RBP25.66■■□□□ 1.7
TSEN54-205ENST00000578415 PAGR1Q9BTK6 254 aa25.66■■□□□ 1.7
TSEN54-205ENST00000578415 TRMT44Q8IYL2 757 aaKnown RBP25.65■■□□□ 1.7
TSEN54-205ENST00000578415 MIGA1Q8NAN2 632 aa25.65■■□□□ 1.7
TSEN54-205ENST00000578415 EAF2Q96CJ1 260 aaPredicted RBP25.65■■□□□ 1.7
TSEN54-205ENST00000578415 CCDC8Q9H0W5 538 aaPredicted RBP25.65■■□□□ 1.7
TSEN54-205ENST00000578415 MYO5AQ9Y4I1 1855 aaKnown RBP25.64■■□□□ 1.7
TSEN54-205ENST00000578415 IDH1O75874 414 aaKnown RBP25.64■■□□□ 1.7
TSEN54-205ENST00000578415 TATDN1Q6P1N9 297 aa25.64■■□□□ 1.7
TSEN54-205ENST00000578415 PLEKHH3Q7Z736 793 aa25.64■■□□□ 1.7
TSEN54-205ENST00000578415 C12orf42Q96LP6 360 aa25.64■■□□□ 1.7
TSEN54-205ENST00000578415 COL6A1P12109 1028 aa25.63■■□□□ 1.69
TSEN54-205ENST00000578415 CCND3P30281 292 aaPredicted RBP25.63■■□□□ 1.69
TSEN54-205ENST00000578415 RGS2P41220 211 aa25.63■■□□□ 1.69
TSEN54-205ENST00000578415 MAGEA10P43363 369 aaPredicted RBP25.63■■□□□ 1.69
TSEN54-205ENST00000578415 LHX8Q68G74 356 aa25.63■■□□□ 1.69
TSEN54-205ENST00000578415 APBA2Q99767 749 aa25.63■■□□□ 1.69
TSEN54-205ENST00000578415 CNMDO75829 334 aa25.62■■□□□ 1.69
TSEN54-205ENST00000578415 ZYXQ15942 572 aaKnown RBP25.62■■□□□ 1.69
TSEN54-205ENST00000578415 CCAR1Q8IX12 1150 aaKnown RBP25.62■■□□□ 1.69
TSEN54-205ENST00000578415 MAGEB6Q8N7X4 407 aa25.62■■□□□ 1.69
TSEN54-205ENST00000578415 EHD4Q9H223 541 aa25.62■■□□□ 1.69
TSEN54-205ENST00000578415 NDUFB9Q9Y6M9 179 aa25.62■■□□□ 1.69
TSEN54-205ENST00000578415 FEZ1Q99689 392 aa25.61■■□□□ 1.69
TSEN54-205ENST00000578415 ANTXR1Q9H6X2 564 aa25.61■■□□□ 1.69
TSEN54-205ENST00000578415 SERPINB13Q9UIV8 391 aa25.61■■□□□ 1.69
TSEN54-205ENST00000578415 RABGAP1Q9Y3P9 1069 aa25.61■■□□□ 1.69
TSEN54-205ENST00000578415 USP17L15C9J2P7 530 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms