RNA–Protein interactions for RNA: ENST00000578357.5

CUEDC1-208, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 661 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-208ENST00000578357 Q7L0L9 218 aa12.29□□□□□ -0.44
CUEDC1-208ENST00000578357 SH3RF3Q8TEJ3 882 aaPredicted RBP12.29□□□□□ -0.44
CUEDC1-208ENST00000578357 GTF3C2Q8WUA4 911 aaPredicted RBP12.29□□□□□ -0.44
CUEDC1-208ENST00000578357 MEIS3Q99687 375 aa12.29□□□□□ -0.44
CUEDC1-208ENST00000578357 TRIM34Q9BYJ4 488 aa12.29□□□□□ -0.44
CUEDC1-208ENST00000578357 RBPJLQ9UBG7 517 aa12.29□□□□□ -0.44
CUEDC1-208ENST00000578357 DOCK2Q92608 1830 aa12.29□□□□□ -0.44
CUEDC1-208ENST00000578357 UQCRFS1P1P0C7P4 283 aa12.28□□□□□ -0.44
CUEDC1-208ENST00000578357 COL6A1P12109 1028 aa12.28□□□□□ -0.44
CUEDC1-208ENST00000578357 ZKSCAN1P17029 563 aaPredicted RBP12.28□□□□□ -0.44
CUEDC1-208ENST00000578357 RGS2P41220 211 aa12.28□□□□□ -0.44
CUEDC1-208ENST00000578357 G3BP1Q13283 466 aaKnown RBP eCLIP12.28□□□□□ -0.44
CUEDC1-208ENST00000578357 MTX1Q13505 466 aa12.28□□□□□ -0.44
CUEDC1-208ENST00000578357 Q3C1V9 767 aa12.28□□□□□ -0.44
CUEDC1-208ENST00000578357 PI16Q6UXB8 463 aa12.28□□□□□ -0.44
CUEDC1-208ENST00000578357 CRACR2BQ8N4Y2 399 aaPredicted RBP12.28□□□□□ -0.44
CUEDC1-208ENST00000578357 TXNRD2Q9NNW7 524 aa12.28□□□□□ -0.44
CUEDC1-208ENST00000578357 DOCK1Q14185 1865 aa12.27□□□□□ -0.44
CUEDC1-208ENST00000578357 GLRX3O76003 335 aaKnown RBP12.27□□□□□ -0.45
CUEDC1-208ENST00000578357 ARID4AP29374 1257 aaPredicted RBP12.27□□□□□ -0.45
CUEDC1-208ENST00000578357 PPP4CP60510 307 aa12.27□□□□□ -0.45
CUEDC1-208ENST00000578357 LHX8Q68G74 356 aa12.27□□□□□ -0.45
CUEDC1-208ENST00000578357 PLEKHH3Q7Z736 793 aa12.27□□□□□ -0.45
CUEDC1-208ENST00000578357 METTL16Q86W50 562 aaKnown RBP12.27□□□□□ -0.45
CUEDC1-208ENST00000578357 TGFBRAP1Q8WUH2 860 aa12.27□□□□□ -0.45
CUEDC1-208ENST00000578357 ARHGAP45Q92619 1136 aa12.27□□□□□ -0.45
CUEDC1-208ENST00000578357 USP6NLQ92738 828 aa12.27□□□□□ -0.45
CUEDC1-208ENST00000578357 CWC22Q9HCG8 908 aaKnown RBP12.27□□□□□ -0.45
CUEDC1-208ENST00000578357 PFASO15067 1338 aa12.27□□□□□ -0.45
CUEDC1-208ENST00000578357 PHIPQ8WWQ0 1821 aa12.27□□□□□ -0.45
CUEDC1-208ENST00000578357 IGSF3O75054 1194 aa12.26□□□□□ -0.45
CUEDC1-208ENST00000578357 ERVK-9P63128 1117 aa12.26□□□□□ -0.45
CUEDC1-208ENST00000578357 ERVK-24P63145 666 aa12.26□□□□□ -0.45
CUEDC1-208ENST00000578357 MORN1Q5T089 497 aa12.26□□□□□ -0.45
CUEDC1-208ENST00000578357 FAM109BQ6ICB4 259 aaPredicted RBP12.26□□□□□ -0.45
CUEDC1-208ENST00000578357 NAA16Q6N069 864 aaPredicted RBP12.26□□□□□ -0.45
CUEDC1-208ENST00000578357 USP17L2Q6R6M4 530 aa12.26□□□□□ -0.45
CUEDC1-208ENST00000578357 ATF7IPQ6VMQ6 1270 aa12.26□□□□□ -0.45
CUEDC1-208ENST00000578357 GPR142Q7Z601 462 aa12.26□□□□□ -0.45
CUEDC1-208ENST00000578357 MAPKAPK5Q8IW41 473 aa12.26□□□□□ -0.45
CUEDC1-208ENST00000578357 EDC3Q96F86 508 aaKnown RBP12.26□□□□□ -0.45
CUEDC1-208ENST00000578357 LBHD1Q9BQE6 289 aaPredicted RBP12.26□□□□□ -0.45
CUEDC1-208ENST00000578357 AATFQ9NY61 560 aaKnown RBP eCLIP12.26□□□□□ -0.45
CUEDC1-208ENST00000578357 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.26□□□□□ -0.45
CUEDC1-208ENST00000578357 PTPRFP10586 1907 aa12.26□□□□□ -0.45
CUEDC1-208ENST00000578357 POTEB2H3BUK9 544 aa12.25□□□□□ -0.45
CUEDC1-208ENST00000578357 PEX10O60683 326 aa12.25□□□□□ -0.45
CUEDC1-208ENST00000578357 CCND3P30281 292 aaPredicted RBP12.25□□□□□ -0.45
CUEDC1-208ENST00000578357 MCAMP43121 646 aa12.25□□□□□ -0.45
CUEDC1-208ENST00000578357 CCNA1P78396 465 aa12.25□□□□□ -0.45
CUEDC1-208ENST00000578357 JAG1P78504 1218 aa12.25□□□□□ -0.45
CUEDC1-208ENST00000578357 MDM2Q00987 491 aaPredicted RBP12.25□□□□□ -0.45
CUEDC1-208ENST00000578357 CCL14Q16627 93 aa12.25□□□□□ -0.45
CUEDC1-208ENST00000578357 LRRC26Q2I0M4 334 aa12.25□□□□□ -0.45
CUEDC1-208ENST00000578357 CCDC158Q5M9N0 1113 aa12.25□□□□□ -0.45
CUEDC1-208ENST00000578357 MFSD14CQ5VZR4 134 aa12.25□□□□□ -0.45
CUEDC1-208ENST00000578357 FRAT1Q92837 279 aaPredicted RBP12.25□□□□□ -0.45
CUEDC1-208ENST00000578357 CLUAP1Q96AJ1 413 aa12.25□□□□□ -0.45
CUEDC1-208ENST00000578357 PAGR1Q9BTK6 254 aa12.25□□□□□ -0.45
CUEDC1-208ENST00000578357 SENP6Q9GZR1 1112 aaPredicted RBP12.25□□□□□ -0.45
CUEDC1-208ENST00000578357 PORCNQ9H237 461 aa12.25□□□□□ -0.45
CUEDC1-208ENST00000578357 EMILIN3Q9NT22 766 aa12.25□□□□□ -0.45
CUEDC1-208ENST00000578357 PALD1Q9ULE6 856 aa12.25□□□□□ -0.45
CUEDC1-208ENST00000578357 RABGAP1Q9Y3P9 1069 aa12.25□□□□□ -0.45
CUEDC1-208ENST00000578357 USP17L15C9J2P7 530 aa12.24□□□□□ -0.45
CUEDC1-208ENST00000578357 USP17L13C9JLJ4 530 aa12.24□□□□□ -0.45
CUEDC1-208ENST00000578357 USP17L11C9JVI0 530 aa12.24□□□□□ -0.45
CUEDC1-208ENST00000578357 USP17L18D6R9N7 530 aa12.24□□□□□ -0.45
CUEDC1-208ENST00000578357 USP17L22D6RA61 530 aa12.24□□□□□ -0.45
CUEDC1-208ENST00000578357 USP17L17D6RBQ6 530 aa12.24□□□□□ -0.45
CUEDC1-208ENST00000578357 USP17L19D6RCP7 530 aa12.24□□□□□ -0.45
CUEDC1-208ENST00000578357 USP17L20D6RJB6 530 aa12.24□□□□□ -0.45
CUEDC1-208ENST00000578357 GDF11O95390 407 aa12.24□□□□□ -0.45
CUEDC1-208ENST00000578357 GNAI2P04899 355 aa12.24□□□□□ -0.45
CUEDC1-208ENST00000578357 HLA-DOAP06340 250 aa12.24□□□□□ -0.45
CUEDC1-208ENST00000578357 TRIM27P14373 513 aa12.24□□□□□ -0.45
CUEDC1-208ENST00000578357 USP17L24Q0WX57 530 aa12.24□□□□□ -0.45
CUEDC1-208ENST00000578357 MAP2K5Q13163 448 aa12.24□□□□□ -0.45
CUEDC1-208ENST00000578357 TTC39AQ5SRH9 613 aa12.24□□□□□ -0.45
CUEDC1-208ENST00000578357 APBA2Q99767 749 aa12.24□□□□□ -0.45
CUEDC1-208ENST00000578357 SNRKQ9NRH2 765 aa12.24□□□□□ -0.45
CUEDC1-208ENST00000578357 PRKAG2Q9UGJ0 569 aa12.24□□□□□ -0.45
CUEDC1-208ENST00000578357 ZBTB21Q9ULJ3 1066 aa12.24□□□□□ -0.45
CUEDC1-208ENST00000578357 FLT1P17948 1338 aa12.23□□□□□ -0.45
CUEDC1-208ENST00000578357 ZBED9Q6R2W3 1325 aa12.23□□□□□ -0.45
CUEDC1-208ENST00000578357 IPO8O15397 1037 aaKnown RBP12.23□□□□□ -0.45
CUEDC1-208ENST00000578357 MSCO60682 206 aa12.23□□□□□ -0.45
CUEDC1-208ENST00000578357 ATP2B2Q01814 1243 aa12.23□□□□□ -0.45
CUEDC1-208ENST00000578357 DNAJC18Q9H819 358 aa12.23□□□□□ -0.45
CUEDC1-208ENST00000578357 GPR108Q9NPR9 543 aa12.23□□□□□ -0.45
CUEDC1-208ENST00000578357 ALPK3Q96L96 1907 aa12.22□□□□□ -0.45
CUEDC1-208ENST00000578357 SLC15A5A6NIM6 579 aa12.22□□□□□ -0.45
CUEDC1-208ENST00000578357 GH2P01242 217 aa12.22□□□□□ -0.45
CUEDC1-208ENST00000578357 CNGA1P29973 690 aa12.22□□□□□ -0.45
CUEDC1-208ENST00000578357 USP14P54578 494 aa12.22□□□□□ -0.45
CUEDC1-208ENST00000578357 WDR78Q5VTH9 848 aa12.22□□□□□ -0.45
CUEDC1-208ENST00000578357 POTEEQ6S8J3 1075 aa12.22□□□□□ -0.45
CUEDC1-208ENST00000578357 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.22□□□□□ -0.45
CUEDC1-208ENST00000578357 LPAR1Q92633 364 aa12.22□□□□□ -0.45
CUEDC1-208ENST00000578357 COL25A1Q9BXS0 654 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms