RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 TBC1D32Q96NH3 1257 aa3.58□□□□□ -1.84
PTP4A1-204ENST00000578299 FERD3LQ96RJ6 166 aa3.58□□□□□ -1.84
PTP4A1-204ENST00000578299 DBNDD2Q9BQY9 259 aa3.58□□□□□ -1.84
PTP4A1-204ENST00000578299 TINF2Q9BSI4 451 aa3.58□□□□□ -1.84
PTP4A1-204ENST00000578299 GINM1Q9NU53 330 aa3.58□□□□□ -1.84
PTP4A1-204ENST00000578299 GMIPQ9P107 970 aa3.58□□□□□ -1.84
PTP4A1-204ENST00000578299 REV1Q9UBZ9 1251 aa3.58□□□□□ -1.84
PTP4A1-204ENST00000578299 TJP2Q9UDY2 1190 aa3.58□□□□□ -1.84
PTP4A1-204ENST00000578299 EFR3BQ9Y2G0 817 aa3.58□□□□□ -1.84
PTP4A1-204ENST00000578299 MEIS3P2A8K0S8 358 aa3.57□□□□□ -1.84
PTP4A1-204ENST00000578299 ATF4P18848 351 aaPredicted RBP3.57□□□□□ -1.84
PTP4A1-204ENST00000578299 ADMP35318 185 aa3.57□□□□□ -1.84
PTP4A1-204ENST00000578299 NKG7Q16617 165 aa3.57□□□□□ -1.84
PTP4A1-204ENST00000578299 CPSF6Q16630 551 aaKnown RBP eCLIP3.57□□□□□ -1.84
PTP4A1-204ENST00000578299 CYP27C1Q4G0S4 372 aa3.57□□□□□ -1.84
PTP4A1-204ENST00000578299 PRAMEF13Q5VWM6 474 aa3.57□□□□□ -1.84
PTP4A1-204ENST00000578299 DUSP27Q5VZP5 1158 aa3.57□□□□□ -1.84
PTP4A1-204ENST00000578299 OGFOD3Q6PK18 319 aa3.57□□□□□ -1.84
PTP4A1-204ENST00000578299 SLFN12Q8IYM2 578 aa3.57□□□□□ -1.84
PTP4A1-204ENST00000578299 FAM13CQ8NE31 585 aa3.57□□□□□ -1.84
PTP4A1-204ENST00000578299 GATA6Q92908 595 aa3.57□□□□□ -1.84
PTP4A1-204ENST00000578299 ACSF2Q96CM8 615 aaPredicted RBP3.57□□□□□ -1.84
PTP4A1-204ENST00000578299 MFSD14AQ96MC6 490 aa3.57□□□□□ -1.84
PTP4A1-204ENST00000578299 PSMG3-AS1Q96PY0 264 aa3.57□□□□□ -1.84
PTP4A1-204ENST00000578299 METTL22Q9BUU2 404 aaPredicted RBP3.57□□□□□ -1.84
PTP4A1-204ENST00000578299 SEMA6BQ9H3T3 888 aa3.57□□□□□ -1.84
PTP4A1-204ENST00000578299 PRDM10Q9NQV6 1147 aa3.57□□□□□ -1.84
PTP4A1-204ENST00000578299 ATG3Q9NT62 314 aa3.57□□□□□ -1.84
PTP4A1-204ENST00000578299 STRIP2Q9ULQ0 834 aa3.57□□□□□ -1.84
PTP4A1-204ENST00000578299 ZNRF3Q9ULT6 936 aa3.57□□□□□ -1.84
PTP4A1-204ENST00000578299 SLC22A31A6NKX4 558 aa3.56□□□□□ -1.84
PTP4A1-204ENST00000578299 K7ELQ4 463 aaPredicted RBP3.56□□□□□ -1.84
PTP4A1-204ENST00000578299 F13BP05160 661 aa3.56□□□□□ -1.84
PTP4A1-204ENST00000578299 FAM87AP0C7U9 286 aa3.56□□□□□ -1.84
PTP4A1-204ENST00000578299 RANGAP1P46060 587 aaPredicted RBP3.56□□□□□ -1.84
PTP4A1-204ENST00000578299 NASPP49321 788 aaPredicted RBP3.56□□□□□ -1.84
PTP4A1-204ENST00000578299 ARID5AQ03989 594 aa3.56□□□□□ -1.84
PTP4A1-204ENST00000578299 NAALADL2Q58DX5 795 aa3.56□□□□□ -1.84
PTP4A1-204ENST00000578299 PRSS36Q5K4E3 855 aa3.56□□□□□ -1.84
PTP4A1-204ENST00000578299 FBXW10Q5XX13 1052 aa3.56□□□□□ -1.84
PTP4A1-204ENST00000578299 ZNF746Q6NUN9 644 aaPredicted RBP3.56□□□□□ -1.84
PTP4A1-204ENST00000578299 FBXL6Q8N531 539 aa3.56□□□□□ -1.84
PTP4A1-204ENST00000578299 TOP6BLQ8N6T0 577 aa3.56□□□□□ -1.84
PTP4A1-204ENST00000578299 RBBP8NLQ8NC74 664 aaPredicted RBP3.56□□□□□ -1.84
PTP4A1-204ENST00000578299 SHKBP1Q8TBC3 707 aa3.56□□□□□ -1.84
PTP4A1-204ENST00000578299 CYB5D2Q8WUJ1 264 aa3.56□□□□□ -1.84
PTP4A1-204ENST00000578299 CPLX3Q8WVH0 158 aa3.56□□□□□ -1.84
PTP4A1-204ENST00000578299 TMEM40Q8WWA1 233 aa3.56□□□□□ -1.84
PTP4A1-204ENST00000578299 CRBNQ96SW2 442 aa3.56□□□□□ -1.84
PTP4A1-204ENST00000578299 MIPEPQ99797 713 aa3.56□□□□□ -1.84
PTP4A1-204ENST00000578299 DPH2Q9BQC3 489 aaPredicted RBP3.56□□□□□ -1.84
PTP4A1-204ENST00000578299 DUSP23Q9BVJ7 150 aa3.56□□□□□ -1.84
PTP4A1-204ENST00000578299 OSBPL1AQ9BXW6 950 aa3.56□□□□□ -1.84
PTP4A1-204ENST00000578299 KLHL3Q9UH77 587 aa3.56□□□□□ -1.84
PTP4A1-204ENST00000578299 PPT2Q9UMR5 302 aa3.56□□□□□ -1.84
PTP4A1-204ENST00000578299 UPK3BL1B0FP48 263 aa3.55□□□□□ -1.84
PTP4A1-204ENST00000578299 WDR64B1ANS9 1081 aa3.55□□□□□ -1.84
PTP4A1-204ENST00000578299 CHURC1-FNTBB4DL54 471 aa3.55□□□□□ -1.84
PTP4A1-204ENST00000578299 UPK3BL2E5RIL1 263 aa3.55□□□□□ -1.84
PTP4A1-204ENST00000578299 DNAJA2O60884 412 aa3.55□□□□□ -1.84
PTP4A1-204ENST00000578299 SLITRK5O94991 958 aa3.55□□□□□ -1.84
PTP4A1-204ENST00000578299 RAG1P15918 1043 aa3.55□□□□□ -1.84
PTP4A1-204ENST00000578299 EIF6P56537 245 aaKnown RBP3.55□□□□□ -1.84
PTP4A1-204ENST00000578299 ARSHQ5FYA8 562 aa3.55□□□□□ -1.84
PTP4A1-204ENST00000578299 CDCP2Q5VXM1 449 aa3.55□□□□□ -1.84
PTP4A1-204ENST00000578299 OVOS1Q6IE37 1185 aa3.55□□□□□ -1.84
PTP4A1-204ENST00000578299 LETMD1Q6P1Q0 360 aa3.55□□□□□ -1.84
PTP4A1-204ENST00000578299 PHACTR4Q8IZ21 702 aa3.55□□□□□ -1.84
PTP4A1-204ENST00000578299 OR6P1Q8NGX9 317 aa3.55□□□□□ -1.84
PTP4A1-204ENST00000578299 XAGE3Q8WTP9 111 aa3.55□□□□□ -1.84
PTP4A1-204ENST00000578299 ATG4CQ96DT6 458 aa3.55□□□□□ -1.84
PTP4A1-204ENST00000578299 CCDC74BQ96LY2 380 aa3.55□□□□□ -1.84
PTP4A1-204ENST00000578299 GMLQ99445 158 aa3.55□□□□□ -1.84
PTP4A1-204ENST00000578299 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.55□□□□□ -1.84
PTP4A1-204ENST00000578299 SRRTQ9BXP5 876 aaKnown RBP3.55□□□□□ -1.84
PTP4A1-204ENST00000578299 CNNM2Q9H8M5 875 aa3.55□□□□□ -1.84
PTP4A1-204ENST00000578299 GTF2IRD1Q9UHL9 959 aa3.55□□□□□ -1.84
PTP4A1-204ENST00000578299 FAM170BA6NMN3 283 aa3.54□□□□□ -1.84
PTP4A1-204ENST00000578299 RGS13O14921 159 aa3.54□□□□□ -1.84
PTP4A1-204ENST00000578299 LEFTY1O75610 366 aa3.54□□□□□ -1.84
PTP4A1-204ENST00000578299 SSBP05455 408 aaKnown RBP eCLIP3.54□□□□□ -1.84
PTP4A1-204ENST00000578299 FGRP09769 529 aa3.54□□□□□ -1.84
PTP4A1-204ENST00000578299 NME1P15531 152 aaKnown RBP3.54□□□□□ -1.84
PTP4A1-204ENST00000578299 CYP7A1P22680 504 aa3.54□□□□□ -1.84
PTP4A1-204ENST00000578299 DNAJA1P31689 397 aaKnown RBP3.54□□□□□ -1.84
PTP4A1-204ENST00000578299 GBP1P32455 592 aa3.54□□□□□ -1.84
PTP4A1-204ENST00000578299 CCNFP41002 786 aa3.54□□□□□ -1.84
PTP4A1-204ENST00000578299 GIPRP48546 466 aa3.54□□□□□ -1.84
PTP4A1-204ENST00000578299 INTS3Q68E01 1043 aaKnown RBP3.54□□□□□ -1.84
PTP4A1-204ENST00000578299 CCDC81Q6ZN84 652 aa3.54□□□□□ -1.84
PTP4A1-204ENST00000578299 ZNF765Q7L2R6 523 aa3.54□□□□□ -1.84
PTP4A1-204ENST00000578299 NLRC3Q7RTR2 1065 aa3.54□□□□□ -1.84
PTP4A1-204ENST00000578299 MCF2L2Q86YR7 1114 aa3.54□□□□□ -1.84
PTP4A1-204ENST00000578299 ZDHHC13Q8IUH4 622 aa3.54□□□□□ -1.84
PTP4A1-204ENST00000578299 SHISA5Q8N114 240 aa3.54□□□□□ -1.84
PTP4A1-204ENST00000578299 TAB3Q8N5C8 712 aaPredicted RBP3.54□□□□□ -1.84
PTP4A1-204ENST00000578299 DNAJB8Q8NHS0 232 aa3.54□□□□□ -1.84
PTP4A1-204ENST00000578299 SHDQ96IW2 340 aa3.54□□□□□ -1.84
PTP4A1-204ENST00000578299 COX4I2Q96KJ9 171 aa3.54□□□□□ -1.84
PTP4A1-204ENST00000578299 TM9SF2Q99805 663 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms