RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 ASNSP08243 561 aa26.61■■□□□ 1.85
SMARCD2-206ENST00000577990 GNAT2P19087 354 aa26.61■■□□□ 1.85
SMARCD2-206ENST00000577990 EVX2Q03828 476 aa26.61■■□□□ 1.85
SMARCD2-206ENST00000577990 GABPAQ06546 454 aa26.61■■□□□ 1.85
SMARCD2-206ENST00000577990 TATDN1Q6P1N9 297 aa26.61■■□□□ 1.85
SMARCD2-206ENST00000577990 RILPL2Q969X0 211 aa26.61■■□□□ 1.85
SMARCD2-206ENST00000577990 TBC1D2Q9BYX2 928 aa26.61■■□□□ 1.85
SMARCD2-206ENST00000577990 HPS5Q9UPZ3 1129 aa26.61■■□□□ 1.85
SMARCD2-206ENST00000577990 SOX10P56693 466 aa26.6■■□□□ 1.85
SMARCD2-206ENST00000577990 GIMAP6Q6P9H5 292 aa26.6■■□□□ 1.85
SMARCD2-206ENST00000577990 FAM43AQ8N2R8 423 aa26.6■■□□□ 1.85
SMARCD2-206ENST00000577990 TNRC18O15417 2968 aaPredicted RBP26.6■■□□□ 1.85
SMARCD2-206ENST00000577990 PTPRFP10586 1907 aa26.59■■□□□ 1.85
SMARCD2-206ENST00000577990 A0A0G2JLL6 359 aaPredicted RBP26.59■■□□□ 1.85
SMARCD2-206ENST00000577990 TRIM75PA6NK02 468 aa26.59■■□□□ 1.85
SMARCD2-206ENST00000577990 USP17L5A8MUK1 530 aa26.59■■□□□ 1.85
SMARCD2-206ENST00000577990 GSG1L2A8MUP6 293 aa26.59■■□□□ 1.85
SMARCD2-206ENST00000577990 BTBD19C9JJ37 291 aa26.59■■□□□ 1.85
SMARCD2-206ENST00000577990 USP17L12C9JPN9 530 aa26.59■■□□□ 1.85
SMARCD2-206ENST00000577990 USP17L21D6R901 530 aa26.59■■□□□ 1.85
SMARCD2-206ENST00000577990 CENPBP07199 599 aaPredicted RBP26.59■■□□□ 1.85
SMARCD2-206ENST00000577990 SHMT1P34896 483 aa26.59■■□□□ 1.85
SMARCD2-206ENST00000577990 JAG1P78504 1218 aa26.59■■□□□ 1.85
SMARCD2-206ENST00000577990 C12orf60Q5U649 245 aa26.59■■□□□ 1.85
SMARCD2-206ENST00000577990 PRRT2Q7Z6L0 340 aaPredicted RBP26.59■■□□□ 1.85
SMARCD2-206ENST00000577990 ZCCHC17Q9NP64 241 aaKnown RBP26.59■■□□□ 1.85
SMARCD2-206ENST00000577990 ARPP21Q9UBL0 812 aaPredicted RBP26.59■■□□□ 1.85
SMARCD2-206ENST00000577990 TAOK2Q9UL54 1235 aa26.59■■□□□ 1.85
SMARCD2-206ENST00000577990 ZBTB21Q9ULJ3 1066 aa26.59■■□□□ 1.85
SMARCD2-206ENST00000577990 RGS19P49795 217 aa26.58■■□□□ 1.85
SMARCD2-206ENST00000577990 MOGSQ13724 837 aa26.58■■□□□ 1.85
SMARCD2-206ENST00000577990 SHROOM1Q2M3G4 852 aaPredicted RBP26.58■■□□□ 1.85
SMARCD2-206ENST00000577990 CERKLQ49MI3 558 aaPredicted RBP26.58■■□□□ 1.85
SMARCD2-206ENST00000577990 CTR9Q6PD62 1173 aa26.58■■□□□ 1.85
SMARCD2-206ENST00000577990 AS3MTQ9HBK9 375 aa26.58■■□□□ 1.85
SMARCD2-206ENST00000577990 CYP2D7A0A087X1C5 515 aa26.57■■□□□ 1.84
SMARCD2-206ENST00000577990 NEFLP07196 543 aa26.57■■□□□ 1.84
SMARCD2-206ENST00000577990 PKN2Q16513 984 aaKnown RBP26.57■■□□□ 1.84
SMARCD2-206ENST00000577990 ANKRD23Q86SG2 305 aa26.57■■□□□ 1.84
SMARCD2-206ENST00000577990 ZNF280CQ8ND82 737 aa26.57■■□□□ 1.84
SMARCD2-206ENST00000577990 HELLSQ9NRZ9 838 aa26.57■■□□□ 1.84
SMARCD2-206ENST00000577990 SWAP70Q9UH65 585 aa26.57■■□□□ 1.84
SMARCD2-206ENST00000577990 CENPFP49454 3210 aa26.56■■□□□ 1.84
SMARCD2-206ENST00000577990 PATL2C9JE40 543 aaKnown RBP26.56■■□□□ 1.84
SMARCD2-206ENST00000577990 GH2P01242 217 aa26.56■■□□□ 1.84
SMARCD2-206ENST00000577990 MLLT1Q03111 559 aaPredicted RBP26.56■■□□□ 1.84
SMARCD2-206ENST00000577990 SPP2Q13103 211 aa26.56■■□□□ 1.84
SMARCD2-206ENST00000577990 TAF1CQ15572 869 aaPredicted RBP26.56■■□□□ 1.84
SMARCD2-206ENST00000577990 FASTKD5Q7L8L6 764 aaKnown RBP26.56■■□□□ 1.84
SMARCD2-206ENST00000577990 DYNLL2Q96FJ2 89 aa26.56■■□□□ 1.84
SMARCD2-206ENST00000577990 EPB41L4AQ9HCS5 686 aaPredicted RBP26.56■■□□□ 1.84
SMARCD2-206ENST00000577990 MYH8P13535 1937 aa26.55■■□□□ 1.84
SMARCD2-206ENST00000577990 APPP05067 770 aa26.55■■□□□ 1.84
SMARCD2-206ENST00000577990 TDO2P48775 406 aa26.55■■□□□ 1.84
SMARCD2-206ENST00000577990 ABCB5Q2M3G0 1257 aa26.55■■□□□ 1.84
SMARCD2-206ENST00000577990 SBK1Q52WX2 424 aa26.55■■□□□ 1.84
SMARCD2-206ENST00000577990 CCDC129Q6ZRS4 1044 aa26.55■■□□□ 1.84
SMARCD2-206ENST00000577990 CENPQQ7L2Z9 268 aaPredicted RBP26.55■■□□□ 1.84
SMARCD2-206ENST00000577990 SLC44A5Q8NCS7 719 aa26.55■■□□□ 1.84
SMARCD2-206ENST00000577990 CD99L2Q8TCZ2 262 aa26.55■■□□□ 1.84
SMARCD2-206ENST00000577990 WDR18Q9BV38 432 aa26.55■■□□□ 1.84
SMARCD2-206ENST00000577990 ZFYVE28Q9HCC9 887 aa26.55■■□□□ 1.84
SMARCD2-206ENST00000577990 TRIM17Q9Y577 477 aa26.55■■□□□ 1.84
SMARCD2-206ENST00000577990 ZSWIM8A7E2V4 1837 aa26.54■■□□□ 1.84
SMARCD2-206ENST00000577990 A0A0D9SFI3 127 aa26.54■■□□□ 1.84
SMARCD2-206ENST00000577990 SMIM22K7EJ46 135 aa26.54■■□□□ 1.84
SMARCD2-206ENST00000577990 TTC22Q5TAA0 569 aa26.54■■□□□ 1.84
SMARCD2-206ENST00000577990 FBXO46Q6PJ61 603 aaPredicted RBP26.54■■□□□ 1.84
SMARCD2-206ENST00000577990 GADL1Q6ZQY3 521 aa26.54■■□□□ 1.84
SMARCD2-206ENST00000577990 FAM227BQ96M60 508 aa26.54■■□□□ 1.84
SMARCD2-206ENST00000577990 NACAP1Q9BZK3 213 aa26.54■■□□□ 1.84
SMARCD2-206ENST00000577990 CABP5Q9NP86 173 aa26.54■■□□□ 1.84
SMARCD2-206ENST00000577990 PDHXO00330 501 aa26.53■■□□□ 1.84
SMARCD2-206ENST00000577990 NMIQ13287 307 aaPredicted RBP26.53■■□□□ 1.84
SMARCD2-206ENST00000577990 GPAT2Q6NUI2 795 aa26.53■■□□□ 1.84
SMARCD2-206ENST00000577990 C16orf86Q6ZW13 317 aa26.53■■□□□ 1.84
SMARCD2-206ENST00000577990 IFNL3Q8IZI9 196 aa26.53■■□□□ 1.84
SMARCD2-206ENST00000577990 SDSP20132 328 aa26.52■■□□□ 1.84
SMARCD2-206ENST00000577990 CDK8P49336 464 aa26.52■■□□□ 1.84
SMARCD2-206ENST00000577990 CAP1Q01518 475 aa26.52■■□□□ 1.84
SMARCD2-206ENST00000577990 MCMDC2Q4G0Z9 681 aa26.52■■□□□ 1.84
SMARCD2-206ENST00000577990 OTOP1Q7RTM1 612 aa26.52■■□□□ 1.84
SMARCD2-206ENST00000577990 LOC285556D6RIA3 1793 aa26.51■■□□□ 1.83
SMARCD2-206ENST00000577990 MINDY4BA8MYZ0 360 aa26.51■■□□□ 1.83
SMARCD2-206ENST00000577990 GSPT1P15170 499 aaKnown RBP26.51■■□□□ 1.83
SMARCD2-206ENST00000577990 RAB3GAP1Q15042 981 aa26.51■■□□□ 1.83
SMARCD2-206ENST00000577990 PROCA1Q8NCQ7 364 aaPredicted RBP26.51■■□□□ 1.83
SMARCD2-206ENST00000577990 ERO1AQ96HE7 468 aa26.51■■□□□ 1.83
SMARCD2-206ENST00000577990 PDE4DIPQ5VU43 2346 aa26.51■■□□□ 1.83
SMARCD2-206ENST00000577990 ROBO3Q96MS0 1386 aa26.5■■□□□ 1.83
SMARCD2-206ENST00000577990 HMGCS2P54868 508 aa26.5■■□□□ 1.83
SMARCD2-206ENST00000577990 SP3Q02447 781 aa26.5■■□□□ 1.83
SMARCD2-206ENST00000577990 MTMR2Q13614 643 aa26.5■■□□□ 1.83
SMARCD2-206ENST00000577990 SH3D19Q5HYK7 790 aa26.5■■□□□ 1.83
SMARCD2-206ENST00000577990 NAPBQ9H115 298 aa26.5■■□□□ 1.83
SMARCD2-206ENST00000577990 HIP1O00291 1037 aa26.49■■□□□ 1.83
SMARCD2-206ENST00000577990 MPHOSPH10O00566 681 aaKnown RBP26.49■■□□□ 1.83
SMARCD2-206ENST00000577990 BACE1P56817 501 aa26.49■■□□□ 1.83
SMARCD2-206ENST00000577990 DIAPH3Q9NSV4 1193 aa26.49■■□□□ 1.83
SMARCD2-206ENST00000577990 AGTPBP1Q9UPW5 1226 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms