RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 GPR161Q8N6U8 529 aaKnown RBP12.22□□□□□ -0.45
RNF43-203ENST00000577716 FANCBQ8NB91 859 aa12.22□□□□□ -0.45
RNF43-203ENST00000577716 SMARCC2Q8TAQ2 1214 aa12.22□□□□□ -0.45
RNF43-203ENST00000577716 NELFBQ8WX92 580 aa12.22□□□□□ -0.45
RNF43-203ENST00000577716 PDLIM2Q96JY6 352 aa12.22□□□□□ -0.45
RNF43-203ENST00000577716 CEP152O94986 1710 aa12.22□□□□□ -0.45
RNF43-203ENST00000577716 DESP17661 470 aa12.22□□□□□ -0.45
RNF43-203ENST00000577716 ERCC3P19447 782 aa12.22□□□□□ -0.45
RNF43-203ENST00000577716 ADORA1P30542 326 aa12.22□□□□□ -0.45
RNF43-203ENST00000577716 TNNC1P63316 161 aa12.22□□□□□ -0.45
RNF43-203ENST00000577716 CNNM4Q6P4Q7 775 aa12.22□□□□□ -0.45
RNF43-203ENST00000577716 GPIHBP1Q8IV16 184 aa12.22□□□□□ -0.45
RNF43-203ENST00000577716 GPATCH11Q8N954 259 aa12.22□□□□□ -0.45
RNF43-203ENST00000577716 CNKSR2Q8WXI2 1034 aa12.22□□□□□ -0.45
RNF43-203ENST00000577716 BBXQ8WY36 941 aaPredicted RBP12.22□□□□□ -0.45
RNF43-203ENST00000577716 RASSF4Q9H2L5 321 aa12.22□□□□□ -0.45
RNF43-203ENST00000577716 LAMC1P11047 1609 aa12.22□□□□□ -0.45
RNF43-203ENST00000577716 MAST3O60307 1309 aa12.22□□□□□ -0.45
RNF43-203ENST00000577716 MROH5Q6ZUA9 1318 aa12.22□□□□□ -0.45
RNF43-203ENST00000577716 CARMIL3Q8ND23 1372 aa12.22□□□□□ -0.45
RNF43-203ENST00000577716 TLDC2A0PJX2 215 aa12.22□□□□□ -0.45
RNF43-203ENST00000577716 SPDYE3A6NKU9 549 aa12.22□□□□□ -0.45
RNF43-203ENST00000577716 ST5P78524 1137 aa12.22□□□□□ -0.45
RNF43-203ENST00000577716 AFAP1L1Q8TED9 768 aa12.22□□□□□ -0.45
RNF43-203ENST00000577716 SAP30BPQ9UHR5 308 aaKnown RBP12.22□□□□□ -0.45
RNF43-203ENST00000577716 NLRP1Q9C000 1473 aa12.22□□□□□ -0.45
RNF43-203ENST00000577716 MAGEA1P43355 309 aa12.21□□□□□ -0.45
RNF43-203ENST00000577716 ARHGEF25Q86VW2 580 aa12.21□□□□□ -0.45
RNF43-203ENST00000577716 TEX11Q8IYF3 940 aa12.21□□□□□ -0.45
RNF43-203ENST00000577716 PSMB7Q99436 277 aa12.21□□□□□ -0.45
RNF43-203ENST00000577716 ERVV-2B6SEH9 535 aa12.21□□□□□ -0.45
RNF43-203ENST00000577716 HMGB2P26583 209 aaKnown RBP12.21□□□□□ -0.45
RNF43-203ENST00000577716 PTPN12Q05209 780 aaKnown RBP12.21□□□□□ -0.45
RNF43-203ENST00000577716 C8orf74Q6P047 294 aa12.21□□□□□ -0.45
RNF43-203ENST00000577716 CCDC65Q8IXS2 484 aa12.21□□□□□ -0.45
RNF43-203ENST00000577716 ZC3H12CQ9C0D7 883 aaKnown RBP12.21□□□□□ -0.45
RNF43-203ENST00000577716 TULP4Q9NRJ4 1543 aa12.21□□□□□ -0.45
RNF43-203ENST00000577716 PNPLA6Q8IY17 1366 aa12.21□□□□□ -0.45
RNF43-203ENST00000577716 USP17L12C9JPN9 530 aa12.21□□□□□ -0.46
RNF43-203ENST00000577716 USP17L21D6R901 530 aa12.21□□□□□ -0.46
RNF43-203ENST00000577716 CTSWP56202 376 aa12.21□□□□□ -0.46
RNF43-203ENST00000577716 RNASE9P60153 205 aaKnown RBP12.21□□□□□ -0.46
RNF43-203ENST00000577716 PPARAQ07869 468 aa12.21□□□□□ -0.46
RNF43-203ENST00000577716 RESTQ13127 1097 aa12.21□□□□□ -0.46
RNF43-203ENST00000577716 GIGYF2Q6Y7W6 1299 aaKnown RBP12.21□□□□□ -0.46
RNF43-203ENST00000577716 CCDC91Q7Z6B0 441 aa12.21□□□□□ -0.46
RNF43-203ENST00000577716 LINC00301Q8NCQ3 95 aa12.21□□□□□ -0.46
RNF43-203ENST00000577716 NUP58Q9BVL2 599 aa12.21□□□□□ -0.46
RNF43-203ENST00000577716 INCENPQ9NQS7 918 aa12.21□□□□□ -0.46
RNF43-203ENST00000577716 POLR3EQ9NVU0 708 aa12.21□□□□□ -0.46
RNF43-203ENST00000577716 PPRC1Q5VV67 1664 aaKnown RBP12.21□□□□□ -0.46
RNF43-203ENST00000577716 CCNT1O60563 726 aaKnown RBP12.21□□□□□ -0.46
RNF43-203ENST00000577716 PRPHP41219 470 aa12.21□□□□□ -0.46
RNF43-203ENST00000577716 MRPL12P52815 198 aaKnown RBP12.21□□□□□ -0.46
RNF43-203ENST00000577716 DCAF17Q5H9S7 520 aaPredicted RBP12.21□□□□□ -0.46
RNF43-203ENST00000577716 PPP4R3AQ6IN85 833 aa12.21□□□□□ -0.46
RNF43-203ENST00000577716 APOA5Q6Q788 366 aa12.21□□□□□ -0.46
RNF43-203ENST00000577716 OR8K1Q8NGG5 319 aa12.21□□□□□ -0.46
RNF43-203ENST00000577716 SECISBP2LQ93073 1101 aaKnown RBP12.21□□□□□ -0.46
RNF43-203ENST00000577716 ZNF622Q969S3 477 aaKnown RBP eCLIP12.21□□□□□ -0.46
RNF43-203ENST00000577716 ALKQ9UM73 1620 aa12.2□□□□□ -0.46
RNF43-203ENST00000577716 EFCAB8A8MWE9 144 aa12.2□□□□□ -0.46
RNF43-203ENST00000577716 TRAF1Q13077 416 aa12.2□□□□□ -0.46
RNF43-203ENST00000577716 GPR108Q9NPR9 543 aa12.2□□□□□ -0.46
RNF43-203ENST00000577716 QRICH2Q9H0J4 1663 aa12.2□□□□□ -0.46
RNF43-203ENST00000577716 POLR1AO95602 1720 aaPredicted RBP12.2□□□□□ -0.46
RNF43-203ENST00000577716 PCCAP05165 728 aaPredicted RBP12.2□□□□□ -0.46
RNF43-203ENST00000577716 CDC25BP30305 580 aa12.2□□□□□ -0.46
RNF43-203ENST00000577716 NONOQ15233 471 aaKnown RBP eCLIP12.2□□□□□ -0.46
RNF43-203ENST00000577716 TRIML1Q8N9V2 468 aa12.2□□□□□ -0.46
RNF43-203ENST00000577716 ZBTB38Q8NAP3 1195 aaPredicted RBP12.2□□□□□ -0.46
RNF43-203ENST00000577716 TFCP2L1Q9NZI6 479 aa12.2□□□□□ -0.46
RNF43-203ENST00000577716 RTCBQ9Y3I0 505 aaKnown RBP12.2□□□□□ -0.46
RNF43-203ENST00000577716 TNKSO95271 1327 aa12.2□□□□□ -0.46
RNF43-203ENST00000577716 FAM13AO94988 1023 aa12.2□□□□□ -0.46
RNF43-203ENST00000577716 ARID4AP29374 1257 aaPredicted RBP12.2□□□□□ -0.46
RNF43-203ENST00000577716 GTF2A1P52655 376 aaPredicted RBP12.2□□□□□ -0.46
RNF43-203ENST00000577716 FAM47AQ5JRC9 791 aa12.2□□□□□ -0.46
RNF43-203ENST00000577716 SDR42E1Q8WUS8 393 aa12.2□□□□□ -0.46
RNF43-203ENST00000577716 GDAP1L1Q96MZ0 367 aa12.2□□□□□ -0.46
RNF43-203ENST00000577716 LRWD1Q9UFC0 647 aa12.2□□□□□ -0.46
RNF43-203ENST00000577716 RASAL2Q9UJF2 1139 aa12.2□□□□□ -0.46
RNF43-203ENST00000577716 PHKA1P46020 1223 aa12.19□□□□□ -0.46
RNF43-203ENST00000577716 TFAP4Q01664 338 aa12.19□□□□□ -0.46
RNF43-203ENST00000577716 TTC31Q49AM3 519 aaPredicted RBP12.19□□□□□ -0.46
RNF43-203ENST00000577716 UTP14CQ5TAP6 766 aaKnown RBP12.19□□□□□ -0.46
RNF43-203ENST00000577716 CCDC51Q96ER9 411 aa12.19□□□□□ -0.46
RNF43-203ENST00000577716 GPCPD1Q9NPB8 672 aa12.19□□□□□ -0.46
RNF43-203ENST00000577716 SETBP1Q9Y6X0 1596 aa12.19□□□□□ -0.46
RNF43-203ENST00000577716 DYMQ7RTS9 669 aa12.19□□□□□ -0.46
RNF43-203ENST00000577716 CPLX4Q7Z7G2 160 aa12.19□□□□□ -0.46
RNF43-203ENST00000577716 LMTK2Q8IWU2 1503 aa12.19□□□□□ -0.46
RNF43-203ENST00000577716 GOLGA6CA6NDK9 693 aa12.19□□□□□ -0.46
RNF43-203ENST00000577716 SMIM23A6NLE4 172 aa12.19□□□□□ -0.46
RNF43-203ENST00000577716 STX10O60499 249 aa12.19□□□□□ -0.46
RNF43-203ENST00000577716 GOLGA6DP0CG33 693 aa12.19□□□□□ -0.46
RNF43-203ENST00000577716 BRD3Q15059 726 aa12.19□□□□□ -0.46
RNF43-203ENST00000577716 UBE3CQ15386 1083 aa12.19□□□□□ -0.46
RNF43-203ENST00000577716 OSBP2Q969R2 916 aa12.19□□□□□ -0.46
RNF43-203ENST00000577716 PPP1R13BQ96KQ4 1090 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms