RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 APBA2Q99767 749 aa11.09□□□□□ -0.63
SMG6-218ENST00000575454 HMG20BQ9P0W2 317 aa11.09□□□□□ -0.63
SMG6-218ENST00000575454 RBPJLQ9UBG7 517 aa11.09□□□□□ -0.63
SMG6-218ENST00000575454 PRKAG2Q9UGJ0 569 aa11.09□□□□□ -0.63
SMG6-218ENST00000575454 SRGAP3O43295 1099 aa11.08□□□□□ -0.64
SMG6-218ENST00000575454 CT47B1P0C2W7 299 aaPredicted RBP11.08□□□□□ -0.64
SMG6-218ENST00000575454 UQCRFS1P1P0C7P4 283 aa11.08□□□□□ -0.64
SMG6-218ENST00000575454 ERVK-9P63128 1117 aa11.08□□□□□ -0.64
SMG6-218ENST00000575454 ERVK-24P63145 666 aa11.08□□□□□ -0.64
SMG6-218ENST00000575454 MDM2Q00987 491 aaPredicted RBP11.08□□□□□ -0.64
SMG6-218ENST00000575454 TFCP2Q12800 502 aa11.08□□□□□ -0.64
SMG6-218ENST00000575454 LRRC26Q2I0M4 334 aa11.08□□□□□ -0.64
SMG6-218ENST00000575454 MORN1Q5T089 497 aa11.08□□□□□ -0.64
SMG6-218ENST00000575454 CRACR2BQ8N4Y2 399 aaPredicted RBP11.08□□□□□ -0.64
SMG6-218ENST00000575454 ZNF384Q8TF68 577 aa11.08□□□□□ -0.64
SMG6-218ENST00000575454 COL25A1Q9BXS0 654 aaPredicted RBP11.08□□□□□ -0.64
SMG6-218ENST00000575454 LRP2BPQ9P2M1 347 aa11.08□□□□□ -0.64
SMG6-218ENST00000575454 MUC3AQ02505 3323 aa11.08□□□□□ -0.64
SMG6-218ENST00000575454 A0A1B0GUL6 1792 aa11.08□□□□□ -0.64
SMG6-218ENST00000575454 GNAI3P08754 354 aa11.07□□□□□ -0.64
SMG6-218ENST00000575454 MAP2K5Q13163 448 aa11.07□□□□□ -0.64
SMG6-218ENST00000575454 RRP1BQ14684 758 aaKnown RBP11.07□□□□□ -0.64
SMG6-218ENST00000575454 GPR142Q7Z601 462 aa11.07□□□□□ -0.64
SMG6-218ENST00000575454 METTL16Q86W50 562 aaKnown RBP11.07□□□□□ -0.64
SMG6-218ENST00000575454 EDC3Q96F86 508 aaKnown RBP11.07□□□□□ -0.64
SMG6-218ENST00000575454 TXNRD2Q9NNW7 524 aa11.07□□□□□ -0.64
SMG6-218ENST00000575454 HLA-DOAP06340 250 aa11.06□□□□□ -0.64
SMG6-218ENST00000575454 ARID4AP29374 1257 aaPredicted RBP11.06□□□□□ -0.64
SMG6-218ENST00000575454 CCND3P30281 292 aaPredicted RBP11.06□□□□□ -0.64
SMG6-218ENST00000575454 PPP4CP60510 307 aa11.06□□□□□ -0.64
SMG6-218ENST00000575454 SLFN5Q08AF3 891 aa11.06□□□□□ -0.64
SMG6-218ENST00000575454 MTX1Q13505 466 aa11.06□□□□□ -0.64
SMG6-218ENST00000575454 Q3C1V9 767 aa11.06□□□□□ -0.64
SMG6-218ENST00000575454 ZNF697Q5TEC3 545 aa11.06□□□□□ -0.64
SMG6-218ENST00000575454 NAA16Q6N069 864 aaPredicted RBP11.06□□□□□ -0.64
SMG6-218ENST00000575454 USP17L2Q6R6M4 530 aa11.06□□□□□ -0.64
SMG6-218ENST00000575454 TBC1D9Q6ZT07 1266 aa11.06□□□□□ -0.64
SMG6-218ENST00000575454 SH3RF3Q8TEJ3 882 aaPredicted RBP11.06□□□□□ -0.64
SMG6-218ENST00000575454 PAGR1Q9BTK6 254 aa11.06□□□□□ -0.64
SMG6-218ENST00000575454 SENP6Q9GZR1 1112 aaPredicted RBP11.06□□□□□ -0.64
SMG6-218ENST00000575454 NOB1Q9ULX3 412 aaKnown RBP11.06□□□□□ -0.64
SMG6-218ENST00000575454 RABGAP1Q9Y3P9 1069 aa11.06□□□□□ -0.64
SMG6-218ENST00000575454 SLC15A5A6NIM6 579 aa11.05□□□□□ -0.64
SMG6-218ENST00000575454 USP17L15C9J2P7 530 aa11.05□□□□□ -0.64
SMG6-218ENST00000575454 USP17L13C9JLJ4 530 aa11.05□□□□□ -0.64
SMG6-218ENST00000575454 USP17L11C9JVI0 530 aa11.05□□□□□ -0.64
SMG6-218ENST00000575454 USP17L18D6R9N7 530 aa11.05□□□□□ -0.64
SMG6-218ENST00000575454 USP17L22D6RA61 530 aa11.05□□□□□ -0.64
SMG6-218ENST00000575454 USP17L17D6RBQ6 530 aa11.05□□□□□ -0.64
SMG6-218ENST00000575454 USP17L19D6RCP7 530 aa11.05□□□□□ -0.64
SMG6-218ENST00000575454 USP17L20D6RJB6 530 aa11.05□□□□□ -0.64
SMG6-218ENST00000575454 DNM1LO00429 736 aa11.05□□□□□ -0.64
SMG6-218ENST00000575454 USP14P54578 494 aa11.05□□□□□ -0.64
SMG6-218ENST00000575454 ATP2B2Q01814 1243 aa11.05□□□□□ -0.64
SMG6-218ENST00000575454 USP17L24Q0WX57 530 aa11.05□□□□□ -0.64
SMG6-218ENST00000575454 G3BP1Q13283 466 aaKnown RBP eCLIP11.05□□□□□ -0.64
SMG6-218ENST00000575454 CERS3Q8IU89 383 aa11.05□□□□□ -0.64
SMG6-218ENST00000575454 LPAR1Q92633 364 aa11.05□□□□□ -0.64
SMG6-218ENST00000575454 GUCD1Q96NT3 240 aa11.05□□□□□ -0.64
SMG6-218ENST00000575454 PORCNQ9H237 461 aa11.05□□□□□ -0.64
SMG6-218ENST00000575454 EMILIN3Q9NT22 766 aa11.05□□□□□ -0.64
SMG6-218ENST00000575454 DDX20Q9UHI6 824 aaKnown RBP11.05□□□□□ -0.64
SMG6-218ENST00000575454 ZBTB21Q9ULJ3 1066 aa11.05□□□□□ -0.64
SMG6-218ENST00000575454 IVNS1ABPQ9Y6Y0 642 aa11.05□□□□□ -0.64
SMG6-218ENST00000575454 CACNA1FO60840 1977 aa11.05□□□□□ -0.64
SMG6-218ENST00000575454 HOXC6P09630 235 aa11.04□□□□□ -0.64
SMG6-218ENST00000575454 CCL14Q16627 93 aa11.04□□□□□ -0.64
SMG6-218ENST00000575454 CCDC158Q5M9N0 1113 aa11.04□□□□□ -0.64
SMG6-218ENST00000575454 PI16Q6UXB8 463 aa11.04□□□□□ -0.64
SMG6-218ENST00000575454 MAPKAPK5Q8IW41 473 aa11.04□□□□□ -0.64
SMG6-218ENST00000575454 ARRDC4Q8NCT1 418 aa11.04□□□□□ -0.64
SMG6-218ENST00000575454 TGFBRAP1Q8WUH2 860 aa11.04□□□□□ -0.64
SMG6-218ENST00000575454 ARHGAP45Q92619 1136 aa11.04□□□□□ -0.64
SMG6-218ENST00000575454 C12orf42Q96LP6 360 aa11.04□□□□□ -0.64
SMG6-218ENST00000575454 MEIS3Q99687 375 aa11.04□□□□□ -0.64
SMG6-218ENST00000575454 FEZ1Q99689 392 aa11.04□□□□□ -0.64
SMG6-218ENST00000575454 AATFQ9NY61 560 aaKnown RBP eCLIP11.04□□□□□ -0.64
SMG6-218ENST00000575454 PEX10O60683 326 aa11.03□□□□□ -0.64
SMG6-218ENST00000575454 GDF11O95390 407 aa11.03□□□□□ -0.64
SMG6-218ENST00000575454 PTPREP23469 700 aa11.03□□□□□ -0.64
SMG6-218ENST00000575454 CNGA1P29973 690 aa11.03□□□□□ -0.64
SMG6-218ENST00000575454 MCAMP43121 646 aa11.03□□□□□ -0.64
SMG6-218ENST00000575454 PALD1Q9ULE6 856 aa11.03□□□□□ -0.64
SMG6-218ENST00000575454 FLT1P17948 1338 aa11.03□□□□□ -0.64
SMG6-218ENST00000575454 GH2P01242 217 aa11.02□□□□□ -0.65
SMG6-218ENST00000575454 GNAI2P04899 355 aa11.02□□□□□ -0.65
SMG6-218ENST00000575454 ATN1P54259 1190 aaPredicted RBP11.02□□□□□ -0.65
SMG6-218ENST00000575454 RTP1P59025 263 aa11.02□□□□□ -0.65
SMG6-218ENST00000575454 JAG1P78504 1218 aa11.02□□□□□ -0.65
SMG6-218ENST00000575454 GRB14Q14449 540 aa11.02□□□□□ -0.65
SMG6-218ENST00000575454 TTC39AQ5SRH9 613 aa11.02□□□□□ -0.65
SMG6-218ENST00000575454 WDR78Q5VTH9 848 aa11.02□□□□□ -0.65
SMG6-218ENST00000575454 TMED8Q6PL24 325 aaPredicted RBP11.02□□□□□ -0.65
SMG6-218ENST00000575454 LBX2Q6XYB7 198 aa11.02□□□□□ -0.65
SMG6-218ENST00000575454 CATSPERGQ6ZRH7 1159 aa11.02□□□□□ -0.65
SMG6-218ENST00000575454 SYMPKQ92797 1274 aaKnown RBP11.02□□□□□ -0.65
SMG6-218ENST00000575454 FAM161BQ96MY7 647 aa11.02□□□□□ -0.65
SMG6-218ENST00000575454 CDX2Q99626 313 aaPredicted RBP11.02□□□□□ -0.65
SMG6-218ENST00000575454 DNAJC18Q9H819 358 aa11.02□□□□□ -0.65
SMG6-218ENST00000575454 GPR108Q9NPR9 543 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms