RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 HLA-DOAP06340 250 aa12.77□□□□□ -0.37
TVP23B-208ENST00000575261 ZAP70P43403 619 aa12.77□□□□□ -0.37
TVP23B-208ENST00000575261 CERS3Q8IU89 383 aa12.77□□□□□ -0.37
TVP23B-208ENST00000575261 CRISPLD2Q9H0B8 497 aa12.77□□□□□ -0.37
TVP23B-208ENST00000575261 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.77□□□□□ -0.37
TVP23B-208ENST00000575261 RBM27Q9P2N5 1060 aaKnown RBP12.77□□□□□ -0.37
TVP23B-208ENST00000575261 MORF4L1Q9UBU8 362 aa12.77□□□□□ -0.37
TVP23B-208ENST00000575261 ZBTB21Q9ULJ3 1066 aa12.77□□□□□ -0.37
TVP23B-208ENST00000575261 NOP58Q9Y2X3 529 aaKnown RBP12.77□□□□□ -0.37
TVP23B-208ENST00000575261 C19orf81C9J6K1 198 aa12.76□□□□□ -0.37
TVP23B-208ENST00000575261 USP17L10C9JJH3 530 aa12.76□□□□□ -0.37
TVP23B-208ENST00000575261 GDF11O95390 407 aa12.76□□□□□ -0.37
TVP23B-208ENST00000575261 HOXA7P31268 230 aaPredicted RBP12.76□□□□□ -0.37
TVP23B-208ENST00000575261 FOXP4Q8IVH2 680 aaPredicted RBP12.76□□□□□ -0.37
TVP23B-208ENST00000575261 SOCS4Q8WXH5 440 aa12.76□□□□□ -0.37
TVP23B-208ENST00000575261 PIH1D3Q9NQM4 214 aaKnown RBP12.76□□□□□ -0.37
TVP23B-208ENST00000575261 TLR7Q9NYK1 1049 aaKnown RBP12.76□□□□□ -0.37
TVP23B-208ENST00000575261 PALD1Q9ULE6 856 aa12.76□□□□□ -0.37
TVP23B-208ENST00000575261 PLXNB2O15031 1838 aa12.76□□□□□ -0.37
TVP23B-208ENST00000575261 MYH1P12882 1939 aa12.76□□□□□ -0.37
TVP23B-208ENST00000575261 ZBTB7BO15156 539 aaPredicted RBP12.75□□□□□ -0.37
TVP23B-208ENST00000575261 EVI5O60447 810 aa12.75□□□□□ -0.37
TVP23B-208ENST00000575261 IDH1O75874 414 aaKnown RBP12.75□□□□□ -0.37
TVP23B-208ENST00000575261 CYP7A1P22680 504 aa12.75□□□□□ -0.37
TVP23B-208ENST00000575261 HERVK_113P62684 666 aa12.75□□□□□ -0.37
TVP23B-208ENST00000575261 HNRNPUQ00839 825 aaKnown RBP eCLIP12.75□□□□□ -0.37
TVP23B-208ENST00000575261 RPTORQ8N122 1335 aa12.75□□□□□ -0.37
TVP23B-208ENST00000575261 ANKLE1Q8NAG6 615 aa12.75□□□□□ -0.37
TVP23B-208ENST00000575261 GTF3C2Q8WUA4 911 aaPredicted RBP12.75□□□□□ -0.37
TVP23B-208ENST00000575261 SAP30BPQ9UHR5 308 aaKnown RBP12.75□□□□□ -0.37
TVP23B-208ENST00000575261 GJD2Q9UKL4 321 aa12.75□□□□□ -0.37
TVP23B-208ENST00000575261 DDX60LQ5H9U9 1706 aaKnown RBP12.74□□□□□ -0.37
TVP23B-208ENST00000575261 RLBP1P12271 317 aa12.74□□□□□ -0.37
TVP23B-208ENST00000575261 USP5P45974 858 aa12.74□□□□□ -0.37
TVP23B-208ENST00000575261 DYNLL1P63167 89 aaKnown RBP12.74□□□□□ -0.37
TVP23B-208ENST00000575261 JAG1P78504 1218 aa12.74□□□□□ -0.37
TVP23B-208ENST00000575261 SHROOM1Q2M3G4 852 aaPredicted RBP12.74□□□□□ -0.37
TVP23B-208ENST00000575261 TMED8Q6PL24 325 aaPredicted RBP12.74□□□□□ -0.37
TVP23B-208ENST00000575261 NECAB2Q7Z6G3 386 aa12.74□□□□□ -0.37
TVP23B-208ENST00000575261 ERC1Q8IUD2 1116 aa12.74□□□□□ -0.37
TVP23B-208ENST00000575261 MIGA1Q8NAN2 632 aa12.74□□□□□ -0.37
TVP23B-208ENST00000575261 EAF2Q96CJ1 260 aaPredicted RBP12.74□□□□□ -0.37
TVP23B-208ENST00000575261 PAWRQ96IZ0 340 aaKnown RBP12.74□□□□□ -0.37
TVP23B-208ENST00000575261 CCDC8Q9H0W5 538 aaPredicted RBP12.74□□□□□ -0.37
TVP23B-208ENST00000575261 PRO3102Q9H379 93 aa12.74□□□□□ -0.37
TVP23B-208ENST00000575261 HMX1Q9NP08 348 aaPredicted RBP12.74□□□□□ -0.37
TVP23B-208ENST00000575261 ALPK3Q96L96 1907 aa12.74□□□□□ -0.37
TVP23B-208ENST00000575261 NAV1Q8NEY1 1877 aa12.74□□□□□ -0.37
TVP23B-208ENST00000575261 DNAH12Q6ZR08 3092 aa12.73□□□□□ -0.37
TVP23B-208ENST00000575261 MAPK4P31152 587 aa12.73□□□□□ -0.37
TVP23B-208ENST00000575261 MAP3K12Q12852 859 aa12.73□□□□□ -0.37
TVP23B-208ENST00000575261 PDE3AQ14432 1141 aa12.73□□□□□ -0.37
TVP23B-208ENST00000575261 CEP85Q6P2H3 762 aa12.73□□□□□ -0.37
TVP23B-208ENST00000575261 MAGEB6Q8N7X4 407 aa12.73□□□□□ -0.37
TVP23B-208ENST00000575261 GPRC5AQ8NFJ5 357 aa12.73□□□□□ -0.37
TVP23B-208ENST00000575261 TRIB2Q92519 343 aa12.73□□□□□ -0.37
TVP23B-208ENST00000575261 P2RX7Q99572 595 aaKnown RBP12.73□□□□□ -0.37
TVP23B-208ENST00000575261 NUDT12Q9BQG2 462 aa12.73□□□□□ -0.37
TVP23B-208ENST00000575261 EHD4Q9H223 541 aa12.73□□□□□ -0.37
TVP23B-208ENST00000575261 COL6A3P12111 3177 aa12.73□□□□□ -0.37
TVP23B-208ENST00000575261 A0A1W2PPC1 479 aa12.72□□□□□ -0.37
TVP23B-208ENST00000575261 GH2P01242 217 aa12.72□□□□□ -0.37
TVP23B-208ENST00000575261 XRCC5P13010 732 aaKnown RBP12.72□□□□□ -0.37
TVP23B-208ENST00000575261 CYP2B6P20813 491 aa12.72□□□□□ -0.37
TVP23B-208ENST00000575261 ERVK-9P63128 1117 aa12.72□□□□□ -0.37
TVP23B-208ENST00000575261 ERVK-24P63145 666 aa12.72□□□□□ -0.37
TVP23B-208ENST00000575261 USP17L2Q6R6M4 530 aa12.72□□□□□ -0.37
TVP23B-208ENST00000575261 CCAR1Q8IX12 1150 aaKnown RBP12.72□□□□□ -0.37
TVP23B-208ENST00000575261 DIS3LQ8TF46 1054 aaKnown RBP12.72□□□□□ -0.37
TVP23B-208ENST00000575261 FEZ1Q99689 392 aa12.72□□□□□ -0.37
TVP23B-208ENST00000575261 PAGR1Q9BTK6 254 aa12.72□□□□□ -0.37
TVP23B-208ENST00000575261 TXNRD2Q9NNW7 524 aa12.72□□□□□ -0.37
TVP23B-208ENST00000575261 SERPINB13Q9UIV8 391 aa12.72□□□□□ -0.37
TVP23B-208ENST00000575261 PRKAR2AP13861 404 aaKnown RBP12.71□□□□□ -0.37
TVP23B-208ENST00000575261 ZKSCAN1P17029 563 aaPredicted RBP12.71□□□□□ -0.37
TVP23B-208ENST00000575261 TRIM32Q13049 653 aa12.71□□□□□ -0.37
TVP23B-208ENST00000575261 MAP3K21Q5TCX8 1036 aa12.71□□□□□ -0.37
TVP23B-208ENST00000575261 TATDN1Q6P1N9 297 aa12.71□□□□□ -0.37
TVP23B-208ENST00000575261 TTC6Q86TZ1 520 aa12.71□□□□□ -0.37
TVP23B-208ENST00000575261 AACSQ86V21 672 aa12.71□□□□□ -0.37
TVP23B-208ENST00000575261 TRMT44Q8IYL2 757 aaKnown RBP12.71□□□□□ -0.37
TVP23B-208ENST00000575261 C12orf42Q96LP6 360 aa12.71□□□□□ -0.37
TVP23B-208ENST00000575261 NBPF3Q9H094 633 aa12.71□□□□□ -0.37
TVP23B-208ENST00000575261 EMILIN3Q9NT22 766 aa12.71□□□□□ -0.37
TVP23B-208ENST00000575261 EXOC6BQ9Y2D4 811 aa12.71□□□□□ -0.37
TVP23B-208ENST00000575261 NDUFB9Q9Y6M9 179 aa12.71□□□□□ -0.37
TVP23B-208ENST00000575261 PEX10O60683 326 aa12.7□□□□□ -0.38
TVP23B-208ENST00000575261 RGS2P41220 211 aa12.7□□□□□ -0.38
TVP23B-208ENST00000575261 USP14P54578 494 aa12.7□□□□□ -0.38
TVP23B-208ENST00000575261 RAB3GAP1Q15042 981 aa12.7□□□□□ -0.38
TVP23B-208ENST00000575261 ZYXQ15942 572 aaKnown RBP12.7□□□□□ -0.38
TVP23B-208ENST00000575261 HSP90AB4PQ58FF6 505 aa12.7□□□□□ -0.38
TVP23B-208ENST00000575261 GPR142Q7Z601 462 aa12.7□□□□□ -0.38
TVP23B-208ENST00000575261 PORCNQ9H237 461 aa12.7□□□□□ -0.38
TVP23B-208ENST00000575261 ANTXR1Q9H6X2 564 aa12.7□□□□□ -0.38
TVP23B-208ENST00000575261 CWC22Q9HCG8 908 aaKnown RBP12.7□□□□□ -0.38
TVP23B-208ENST00000575261 RBPJLQ9UBG7 517 aa12.7□□□□□ -0.38
TVP23B-208ENST00000575261 OGDHLQ9ULD0 1010 aa12.7□□□□□ -0.38
TVP23B-208ENST00000575261 USP17L15C9J2P7 530 aa12.69□□□□□ -0.38
TVP23B-208ENST00000575261 USP17L13C9JLJ4 530 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms