RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 XBP1P17861 261 aa9.72□□□□□ -0.85
RPAIN-215ENST00000575112 SMC1AQ14683 1233 aaKnown RBP9.72□□□□□ -0.85
RPAIN-215ENST00000575112 PIK3AP1Q6ZUJ8 805 aa9.72□□□□□ -0.85
RPAIN-215ENST00000575112 CATIPQ7Z7H3 387 aa9.72□□□□□ -0.85
RPAIN-215ENST00000575112 KLHL34Q8N239 644 aa9.72□□□□□ -0.85
RPAIN-215ENST00000575112 ALDH8A1Q9H2A2 487 aaPredicted RBP9.72□□□□□ -0.85
RPAIN-215ENST00000575112 MRPL44Q9H9J2 332 aaKnown RBP9.72□□□□□ -0.85
RPAIN-215ENST00000575112 CCDC87Q9NVE4 849 aa9.72□□□□□ -0.85
RPAIN-215ENST00000575112 UQCRFS1P1P0C7P4 283 aa9.72□□□□□ -0.85
RPAIN-215ENST00000575112 ADD2P35612 726 aa9.72□□□□□ -0.85
RPAIN-215ENST00000575112 MCM6Q14566 821 aa9.72□□□□□ -0.85
RPAIN-215ENST00000575112 TAF3Q5VWG9 929 aa9.72□□□□□ -0.85
RPAIN-215ENST00000575112 SHC4Q6S5L8 630 aa9.72□□□□□ -0.85
RPAIN-215ENST00000575112 CTCFLQ8NI51 663 aaPredicted RBP9.72□□□□□ -0.85
RPAIN-215ENST00000575112 SETDB2Q96T68 719 aa9.72□□□□□ -0.85
RPAIN-215ENST00000575112 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.72□□□□□ -0.852e-8■□□□□ 9.4
RPAIN-215ENST00000575112 HPS5Q9UPZ3 1129 aa9.72□□□□□ -0.85
RPAIN-215ENST00000575112 PCDHA5Q9Y5H7 936 aa9.72□□□□□ -0.85
RPAIN-215ENST00000575112 MARF1Q9Y4F3 1742 aaKnown RBP9.71□□□□□ -0.85
RPAIN-215ENST00000575112 CTAGE5O15320 804 aa9.71□□□□□ -0.85
RPAIN-215ENST00000575112 LMAN1P49257 510 aa9.71□□□□□ -0.85
RPAIN-215ENST00000575112 GSDMDP57764 484 aa9.71□□□□□ -0.85
RPAIN-215ENST00000575112 DIXDC1Q155Q3 683 aa9.71□□□□□ -0.85
RPAIN-215ENST00000575112 HEATR3Q7Z4Q2 680 aa9.71□□□□□ -0.85
RPAIN-215ENST00000575112 SLC4A9Q96Q91 983 aa9.71□□□□□ -0.85
RPAIN-215ENST00000575112 PPP2R2CQ9Y2T4 447 aa9.71□□□□□ -0.85
RPAIN-215ENST00000575112 KLRK1P26718 216 aa9.71□□□□□ -0.86
RPAIN-215ENST00000575112 FMR1Q06787 632 aaKnown RBP eCLIP9.71□□□□□ -0.86
RPAIN-215ENST00000575112 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.71□□□□□ -0.86
RPAIN-215ENST00000575112 MAPKAPK5Q8IW41 473 aa9.71□□□□□ -0.86
RPAIN-215ENST00000575112 ZSCAN29Q8IWY8 852 aaPredicted RBP9.71□□□□□ -0.86
RPAIN-215ENST00000575112 DYNLL2Q96FJ2 89 aa9.71□□□□□ -0.86
RPAIN-215ENST00000575112 MED15Q96RN5 788 aa9.71□□□□□ -0.86
RPAIN-215ENST00000575112 CDC5LQ99459 802 aaKnown RBP9.71□□□□□ -0.86
RPAIN-215ENST00000575112 CALCOCO1Q9P1Z2 691 aa9.71□□□□□ -0.86
RPAIN-215ENST00000575112 PCDHB6Q9Y5E3 794 aa9.71□□□□□ -0.86
RPAIN-215ENST00000575112 AKNAD1Q5T1N1 836 aa9.71□□□□□ -0.86
RPAIN-215ENST00000575112 CELF1Q92879 486 aaKnown RBP9.71□□□□□ -0.86
RPAIN-215ENST00000575112 BRMS1Q9HCU9 246 aa9.71□□□□□ -0.86
RPAIN-215ENST00000575112 RTEL1Q9NZ71 1219 aa9.71□□□□□ -0.86
RPAIN-215ENST00000575112 PRR29P0C7W0 189 aa9.7□□□□□ -0.86
RPAIN-215ENST00000575112 CYP19A1P11511 503 aaPredicted RBP9.7□□□□□ -0.86
RPAIN-215ENST00000575112 NLRP12P59046 1061 aa9.7□□□□□ -0.86
RPAIN-215ENST00000575112 KIF23Q02241 960 aaPredicted RBP9.7□□□□□ -0.86
RPAIN-215ENST00000575112 METTL16Q86W50 562 aaKnown RBP9.7□□□□□ -0.86
RPAIN-215ENST00000575112 ZNF274Q96GC6 653 aaPredicted RBP9.7□□□□□ -0.86
RPAIN-215ENST00000575112 EPSTI1Q96J88 318 aa9.7□□□□□ -0.86
RPAIN-215ENST00000575112 NLRP3Q96P20 1036 aa9.7□□□□□ -0.86
RPAIN-215ENST00000575112 FUT8Q9BYC5 575 aa9.7□□□□□ -0.86
RPAIN-215ENST00000575112 VPS16Q9H269 839 aa9.7□□□□□ -0.86
RPAIN-215ENST00000575112 PSDA5PKW4 1024 aaPredicted RBP9.7□□□□□ -0.86
RPAIN-215ENST00000575112 SOWAHDA6NJG2 315 aa9.7□□□□□ -0.86
RPAIN-215ENST00000575112 CASP7P55210 303 aa9.7□□□□□ -0.86
RPAIN-215ENST00000575112 SLC44A5Q8NCS7 719 aa9.7□□□□□ -0.86
RPAIN-215ENST00000575112 ESR2Q92731 530 aa9.7□□□□□ -0.86
RPAIN-215ENST00000575112 STRBPQ96SI9 672 aaKnown RBP9.7□□□□□ -0.86
RPAIN-215ENST00000575112 PNKPQ96T60 521 aa9.7□□□□□ -0.86
RPAIN-215ENST00000575112 ISCA1Q9BUE6 129 aa9.7□□□□□ -0.86
RPAIN-215ENST00000575112 RSPH14Q9UHP6 348 aa9.7□□□□□ -0.86
RPAIN-215ENST00000575112 RIPOR2Q9Y4F9 1068 aa9.7□□□□□ -0.86
RPAIN-215ENST00000575112 TNKSO95271 1327 aa9.7□□□□□ -0.86
RPAIN-215ENST00000575112 KDM3BQ7LBC6 1761 aa9.7□□□□□ -0.86
RPAIN-215ENST00000575112 PLEKHA8P1O95397 391 aa9.7□□□□□ -0.86
RPAIN-215ENST00000575112 PRDX5P30044 214 aa9.7□□□□□ -0.86
RPAIN-215ENST00000575112 RFC4P35249 363 aa9.7□□□□□ -0.86
RPAIN-215ENST00000575112 NAP1L1P55209 391 aaKnown RBP9.7□□□□□ -0.86
RPAIN-215ENST00000575112 ZSCAN26Q16670 478 aa9.7□□□□□ -0.86
RPAIN-215ENST00000575112 NOM1Q5C9Z4 860 aaKnown RBP9.7□□□□□ -0.86
RPAIN-215ENST00000575112 GDAP1L1Q96MZ0 367 aa9.7□□□□□ -0.86
RPAIN-215ENST00000575112 SAMSN1Q9NSI8 373 aaKnown RBP9.7□□□□□ -0.86
RPAIN-215ENST00000575112 HOOK1Q9UJC3 728 aaKnown RBP9.7□□□□□ -0.86
RPAIN-215ENST00000575112 ADAM21Q9UKJ8 722 aa9.7□□□□□ -0.86
RPAIN-215ENST00000575112 TFR2Q9UP52 801 aa9.7□□□□□ -0.86
RPAIN-215ENST00000575112 NFE2L3Q9Y4A8 694 aa9.7□□□□□ -0.86
RPAIN-215ENST00000575112 PATL2C9JE40 543 aaKnown RBP9.69□□□□□ -0.86
RPAIN-215ENST00000575112 UBAP1LF5GYI3 381 aa9.69□□□□□ -0.86
RPAIN-215ENST00000575112 PPP2R3AQ06190 1150 aa9.69□□□□□ -0.86
RPAIN-215ENST00000575112 PPFIBP1Q86W92 1011 aa9.69□□□□□ -0.86
RPAIN-215ENST00000575112 ZNF654Q8IZM8 581 aa9.69□□□□□ -0.86
RPAIN-215ENST00000575112 LLPHQ9BRT6 129 aaKnown RBP9.69□□□□□ -0.86
RPAIN-215ENST00000575112 PDE11AQ9HCR9 933 aa9.69□□□□□ -0.86
RPAIN-215ENST00000575112 PPP1R1BQ9UD71 204 aaPredicted RBP9.69□□□□□ -0.86
RPAIN-215ENST00000575112 TEX33O43247 280 aa9.69□□□□□ -0.86
RPAIN-215ENST00000575112 LTN1O94822 1766 aa9.69□□□□□ -0.86
RPAIN-215ENST00000575112 ABCC6O95255 1503 aa9.69□□□□□ -0.86
RPAIN-215ENST00000575112 CAVIN2O95810 425 aa9.69□□□□□ -0.86
RPAIN-215ENST00000575112 IDEP14735 1019 aa9.69□□□□□ -0.86
RPAIN-215ENST00000575112 ZNF444Q8N0Y2 327 aaPredicted RBP9.69□□□□□ -0.86
RPAIN-215ENST00000575112 CCDC150Q8NCX0 1101 aa9.69□□□□□ -0.86
RPAIN-215ENST00000575112 USP17L8P0C7I0 530 aa9.69□□□□□ -0.86
RPAIN-215ENST00000575112 PPARAQ07869 468 aa9.69□□□□□ -0.86
RPAIN-215ENST00000575112 RRAGBQ5VZM2 374 aa9.69□□□□□ -0.86
RPAIN-215ENST00000575112 C3orf67Q6ZVT6 689 aa9.69□□□□□ -0.86
RPAIN-215ENST00000575112 ZNF622Q969S3 477 aaKnown RBP eCLIP9.69□□□□□ -0.86
RPAIN-215ENST00000575112 DRC1Q96MC2 740 aa9.69□□□□□ -0.86
RPAIN-215ENST00000575112 UBXN6Q9BZV1 441 aa9.69□□□□□ -0.86
RPAIN-215ENST00000575112 RABEP2Q9H5N1 569 aa9.69□□□□□ -0.86
RPAIN-215ENST00000575112 IMPACTQ9P2X3 320 aa9.69□□□□□ -0.86
RPAIN-215ENST00000575112 ZNF652Q9Y2D9 606 aa9.69□□□□□ -0.86
RPAIN-215ENST00000575112 UBN2Q6ZU65 1347 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms