RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 CDK5RAP2Q96SN8 1893 aa18.57■□□□□ 0.56
CTNS-209ENST00000574776 SGPL1O95470 568 aa18.57■□□□□ 0.56
CTNS-209ENST00000574776 AACSQ86V21 672 aa18.57■□□□□ 0.56
CTNS-209ENST00000574776 MAGEB6Q8N7X4 407 aa18.57■□□□□ 0.56
CTNS-209ENST00000574776 TMOD4Q9NZQ9 345 aa18.57■□□□□ 0.56
CTNS-209ENST00000574776 MAST2Q6P0Q8 1798 aa18.56■□□□□ 0.56
CTNS-209ENST00000574776 TFRCP02786 760 aaKnown RBP18.56■□□□□ 0.56
CTNS-209ENST00000574776 HLA-DOAP06340 250 aa18.56■□□□□ 0.56
CTNS-209ENST00000574776 UBE2Q1Q7Z7E8 422 aa18.56■□□□□ 0.56
CTNS-209ENST00000574776 ERC1Q8IUD2 1116 aa18.56■□□□□ 0.56
CTNS-209ENST00000574776 P2RX7Q99572 595 aaKnown RBP18.56■□□□□ 0.56
CTNS-209ENST00000574776 LOC285556D6RIA3 1793 aa18.55■□□□□ 0.56
CTNS-209ENST00000574776 C19orf81C9J6K1 198 aa18.55■□□□□ 0.56
CTNS-209ENST00000574776 USP17L10C9JJH3 530 aa18.55■□□□□ 0.56
CTNS-209ENST00000574776 USP5P45974 858 aa18.55■□□□□ 0.56
CTNS-209ENST00000574776 IRX3P78415 501 aaPredicted RBP18.55■□□□□ 0.56
CTNS-209ENST00000574776 DEFB118Q96PH6 123 aa18.55■□□□□ 0.56
CTNS-209ENST00000574776 IL1RAPL2Q9NP60 686 aa18.55■□□□□ 0.56
CTNS-209ENST00000574776 GJD2Q9UKL4 321 aa18.55■□□□□ 0.56
CTNS-209ENST00000574776 ZBTB21Q9ULJ3 1066 aa18.55■□□□□ 0.56
CTNS-209ENST00000574776 ZBED9Q6R2W3 1325 aa18.54■□□□□ 0.56
CTNS-209ENST00000574776 FOCADQ5VW36 1801 aa18.54■□□□□ 0.56
CTNS-209ENST00000574776 PEX10O60683 326 aa18.54■□□□□ 0.56
CTNS-209ENST00000574776 HOXA7P31268 230 aaPredicted RBP18.54■□□□□ 0.56
CTNS-209ENST00000574776 MAP3K12Q12852 859 aa18.54■□□□□ 0.56
CTNS-209ENST00000574776 GINM1Q9NU53 330 aa18.54■□□□□ 0.56
CTNS-209ENST00000574776 FARP2O94887 1054 aaPredicted RBP18.53■□□□□ 0.56
CTNS-209ENST00000574776 RHPN1Q8TCX5 695 aa18.53■□□□□ 0.56
CTNS-209ENST00000574776 HTATIP2Q9BUP3 242 aa18.53■□□□□ 0.56
CTNS-209ENST00000574776 MORF4L1Q9UBU8 362 aa18.53■□□□□ 0.56
CTNS-209ENST00000574776 APBB1O00213 710 aa18.52■□□□□ 0.56
CTNS-209ENST00000574776 GH2P01242 217 aa18.52■□□□□ 0.56
CTNS-209ENST00000574776 FXR1P51114 621 aaKnown RBP eCLIP18.52■□□□□ 0.56
CTNS-209ENST00000574776 HSP90AB4PQ58FF6 505 aa18.52■□□□□ 0.56
CTNS-209ENST00000574776 CERS3Q8IU89 383 aa18.52■□□□□ 0.56
CTNS-209ENST00000574776 BCL11AQ9H165 835 aa18.52■□□□□ 0.56
CTNS-209ENST00000574776 TXNRD2Q9NNW7 524 aa18.52■□□□□ 0.56
CTNS-209ENST00000574776 PAK6Q9NQU5 681 aaPredicted RBP18.52■□□□□ 0.56
CTNS-209ENST00000574776 EMILIN3Q9NT22 766 aa18.52■□□□□ 0.56
CTNS-209ENST00000574776 MYH1P12882 1939 aa18.52■□□□□ 0.56
CTNS-209ENST00000574776 TRIOBPQ9H2D6 2365 aa18.51■□□□□ 0.55
CTNS-209ENST00000574776 MS4A1P11836 297 aa18.51■□□□□ 0.55
CTNS-209ENST00000574776 HERVK_113P62684 666 aa18.51■□□□□ 0.55
CTNS-209ENST00000574776 TATDN1Q6P1N9 297 aa18.51■□□□□ 0.55
CTNS-209ENST00000574776 CHRDL2Q6WN34 429 aa18.51■□□□□ 0.55
CTNS-209ENST00000574776 GPRC5AQ8NFJ5 357 aa18.51■□□□□ 0.55
CTNS-209ENST00000574776 RBPJLQ9UBG7 517 aa18.51■□□□□ 0.55
CTNS-209ENST00000574776 TRIM32Q13049 653 aa18.5■□□□□ 0.55
CTNS-209ENST00000574776 Q3C1V9 767 aa18.5■□□□□ 0.55
CTNS-209ENST00000574776 USP17L2Q6R6M4 530 aa18.5■□□□□ 0.55
CTNS-209ENST00000574776 TTC6Q86TZ1 520 aa18.5■□□□□ 0.55
CTNS-209ENST00000574776 CRISPLD2Q9H0B8 497 aa18.5■□□□□ 0.55
CTNS-209ENST00000574776 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.5■□□□□ 0.55
CTNS-209ENST00000574776 SERPINB13Q9UIV8 391 aa18.5■□□□□ 0.55
CTNS-209ENST00000574776 COG6Q9Y2V7 657 aa18.5■□□□□ 0.55
CTNS-209ENST00000574776 MAGEB6P1A0A0J9YX57 407 aa18.49■□□□□ 0.55
CTNS-209ENST00000574776 HMGCRP04035 888 aa18.49■□□□□ 0.55
CTNS-209ENST00000574776 CYP2B6P20813 491 aa18.49■□□□□ 0.55
CTNS-209ENST00000574776 PLCD1P51178 756 aa18.49■□□□□ 0.55
CTNS-209ENST00000574776 TTF1Q15361 905 aaPredicted RBP18.49■□□□□ 0.55
CTNS-209ENST00000574776 ZYXQ15942 572 aaKnown RBP18.49■□□□□ 0.55
CTNS-209ENST00000574776 CERKLQ49MI3 558 aaPredicted RBP18.49■□□□□ 0.55
CTNS-209ENST00000574776 TMED8Q6PL24 325 aaPredicted RBP18.49■□□□□ 0.55
CTNS-209ENST00000574776 RPAP2Q8IXW5 612 aaPredicted RBP18.49■□□□□ 0.55
CTNS-209ENST00000574776 CLASRPQ8N2M8 674 aaKnown RBP18.49■□□□□ 0.55
CTNS-209ENST00000574776 RIOK1Q9BRS2 568 aaKnown RBP18.49■□□□□ 0.55
CTNS-209ENST00000574776 EHD4Q9H223 541 aa18.49■□□□□ 0.55
CTNS-209ENST00000574776 NR2E3Q9Y5X4 410 aa18.49■□□□□ 0.55
CTNS-209ENST00000574776 CAPN2P17655 700 aa18.48■□□□□ 0.55
CTNS-209ENST00000574776 RAB3GAP1Q15042 981 aa18.48■□□□□ 0.55
CTNS-209ENST00000574776 SLC9C2Q5TAH2 1124 aa18.48■□□□□ 0.55
CTNS-209ENST00000574776 POTEEQ6S8J3 1075 aa18.48■□□□□ 0.55
CTNS-209ENST00000574776 SIRT2Q8IXJ6 389 aa18.48■□□□□ 0.55
CTNS-209ENST00000574776 PAWRQ96IZ0 340 aaKnown RBP18.48■□□□□ 0.55
CTNS-209ENST00000574776 PAGR1Q9BTK6 254 aa18.48■□□□□ 0.55
CTNS-209ENST00000574776 HMX1Q9NP08 348 aaPredicted RBP18.48■□□□□ 0.55
CTNS-209ENST00000574776 RPTORQ8N122 1335 aa18.48■□□□□ 0.55
CTNS-209ENST00000574776 GOLIM4O00461 696 aa18.47■□□□□ 0.55
CTNS-209ENST00000574776 POLR3DP05423 398 aaPredicted RBP18.47■□□□□ 0.55
CTNS-209ENST00000574776 IFIT2P09913 472 aaKnown RBP18.47■□□□□ 0.55
CTNS-209ENST00000574776 PDE6AP16499 860 aa18.47■□□□□ 0.55
CTNS-209ENST00000574776 ERVK-9P63128 1117 aa18.47■□□□□ 0.55
CTNS-209ENST00000574776 ERVK-24P63145 666 aa18.47■□□□□ 0.55
CTNS-209ENST00000574776 ABCB5Q2M3G0 1257 aa18.47■□□□□ 0.55
CTNS-209ENST00000574776 CCAR1Q8IX12 1150 aaKnown RBP18.47■□□□□ 0.55
CTNS-209ENST00000574776 TRIB2Q92519 343 aa18.47■□□□□ 0.55
CTNS-209ENST00000574776 KIF1BPQ96EK5 621 aa18.47■□□□□ 0.55
CTNS-209ENST00000574776 DNAJC2Q99543 621 aaKnown RBP18.47■□□□□ 0.55
CTNS-209ENST00000574776 FEZ1Q99689 392 aa18.47■□□□□ 0.55
CTNS-209ENST00000574776 NUDT12Q9BQG2 462 aa18.47■□□□□ 0.55
CTNS-209ENST00000574776 ZBTB40Q9NUA8 1239 aa18.47■□□□□ 0.55
CTNS-209ENST00000574776 RBM27Q9P2N5 1060 aaKnown RBP18.47■□□□□ 0.55
CTNS-209ENST00000574776 PLXNB2O15031 1838 aa18.46■□□□□ 0.55
CTNS-209ENST00000574776 EVI5O60447 810 aa18.46■□□□□ 0.55
CTNS-209ENST00000574776 HMMRO75330 724 aa18.46■□□□□ 0.55
CTNS-209ENST00000574776 SHMT1P34896 483 aa18.46■□□□□ 0.55
CTNS-209ENST00000574776 ACER1Q8TDN7 264 aa18.46■□□□□ 0.55
CTNS-209ENST00000574776 PORCNQ9H237 461 aa18.46■□□□□ 0.55
CTNS-209ENST00000574776 CABP5Q9NP86 173 aa18.46■□□□□ 0.55
CTNS-209ENST00000574776 DDX19BQ9UMR2 479 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms