RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 MIPEPQ99797 713 aa8.12□□□□□ -1.11
CDC27-216ENST00000574304 BSDC1Q9NW68 430 aaPredicted RBP8.12□□□□□ -1.11
CDC27-216ENST00000574304 GTF2IRD1Q9UHL9 959 aa8.12□□□□□ -1.11
CDC27-216ENST00000574304 POLR3KQ9Y2Y1 108 aaPredicted RBP8.12□□□□□ -1.11
CDC27-216ENST00000574304 U3KQE9 123 aa8.12□□□□□ -1.11
CDC27-216ENST00000574304 GRIN3BO60391 1043 aa8.11□□□□□ -1.11
CDC27-216ENST00000574304 EOMESO95936 686 aa8.11□□□□□ -1.11
CDC27-216ENST00000574304 CWF19L2Q2TBE0 894 aaKnown RBP8.11□□□□□ -1.11
CDC27-216ENST00000574304 USP48Q86UV5 1035 aa8.11□□□□□ -1.11
CDC27-216ENST00000574304 MCATQ8IVS2 390 aaKnown RBP8.11□□□□□ -1.11
CDC27-216ENST00000574304 XAGE3Q8WTP9 111 aa8.11□□□□□ -1.11
CDC27-216ENST00000574304 ACSF2Q96CM8 615 aaPredicted RBP8.11□□□□□ -1.11
CDC27-216ENST00000574304 DPH2Q9BQC3 489 aaPredicted RBP8.11□□□□□ -1.11
CDC27-216ENST00000574304 LRRC3Q9BY71 257 aa8.11□□□□□ -1.11
CDC27-216ENST00000574304 PODXL2Q9NZ53 605 aa8.11□□□□□ -1.11
CDC27-216ENST00000574304 PRR36Q9H6K5 1346 aa8.1□□□□□ -1.11
CDC27-216ENST00000574304 PRNPP04156 253 aa8.1□□□□□ -1.11
CDC27-216ENST00000574304 ZNF394Q53GI3 561 aa8.1□□□□□ -1.11
CDC27-216ENST00000574304 TMEM201Q5SNT2 666 aa8.1□□□□□ -1.11
CDC27-216ENST00000574304 XP32Q5T750 250 aa8.1□□□□□ -1.11
CDC27-216ENST00000574304 PLD6Q8N2A8 252 aaKnown RBP8.1□□□□□ -1.11
CDC27-216ENST00000574304 MKNK2Q9HBH9 465 aa8.1□□□□□ -1.11
CDC27-216ENST00000574304 IGF2BP3O00425 579 aaKnown RBP eCLIP8.09□□□□□ -1.11
CDC27-216ENST00000574304 ADAMTS4O75173 837 aa8.09□□□□□ -1.11
CDC27-216ENST00000574304 HTR3BO95264 441 aa8.09□□□□□ -1.11
CDC27-216ENST00000574304 WNT11O96014 354 aa8.09□□□□□ -1.11
CDC27-216ENST00000574304 CRKP46108 304 aa8.09□□□□□ -1.11
CDC27-216ENST00000574304 OXCT1P55809 520 aa8.09□□□□□ -1.11
CDC27-216ENST00000574304 LETMD1Q6P1Q0 360 aa8.09□□□□□ -1.11
CDC27-216ENST00000574304 KIAA0825Q8IV33 1275 aa8.09□□□□□ -1.11
CDC27-216ENST00000574304 NETO1Q8TDF5 533 aa8.09□□□□□ -1.11
CDC27-216ENST00000574304 SPON2Q9BUD6 331 aa8.09□□□□□ -1.11
CDC27-216ENST00000574304 PRDM5Q9NQX1 630 aaPredicted RBP8.09□□□□□ -1.11
CDC27-216ENST00000574304 UBP1Q9NZI7 540 aa8.09□□□□□ -1.11
CDC27-216ENST00000574304 REV1Q9UBZ9 1251 aa8.09□□□□□ -1.11
CDC27-216ENST00000574304 CCDC39Q9UFE4 941 aa8.09□□□□□ -1.11
CDC27-216ENST00000574304 TPX2Q9ULW0 747 aaKnown RBP8.09□□□□□ -1.11
CDC27-216ENST00000574304 PCDHGB7Q9Y5F8 929 aa8.09□□□□□ -1.11
CDC27-216ENST00000574304 CEACAM5P06731 702 aa8.08□□□□□ -1.12
CDC27-216ENST00000574304 APOBRQ0VD83 1088 aa8.08□□□□□ -1.12
CDC27-216ENST00000574304 FAM13CQ8NE31 585 aa8.08□□□□□ -1.12
CDC27-216ENST00000574304 RIN3Q8TB24 985 aa8.08□□□□□ -1.12
CDC27-216ENST00000574304 BRMS1Q9HCU9 246 aa8.08□□□□□ -1.12
CDC27-216ENST00000574304 ANGEL1Q9UNK9 670 aaKnown RBP8.08□□□□□ -1.12
CDC27-216ENST00000574304 MAPK8IP1Q9UQF2 711 aa8.08□□□□□ -1.12
CDC27-216ENST00000574304 UPK3BL1B0FP48 263 aa8.07□□□□□ -1.12
CDC27-216ENST00000574304 UPK3BL2E5RIL1 263 aa8.07□□□□□ -1.12
CDC27-216ENST00000574304 ITIH2P19823 946 aa8.07□□□□□ -1.12
CDC27-216ENST00000574304 YARSP54577 528 aaKnown RBP8.07□□□□□ -1.12
CDC27-216ENST00000574304 IFI16Q16666 785 aaKnown RBP8.07□□□□□ -1.12
CDC27-216ENST00000574304 SEZ6Q53EL9 994 aa8.07□□□□□ -1.12
CDC27-216ENST00000574304 VSIG10LQ86VR7 867 aa8.07□□□□□ -1.12
CDC27-216ENST00000574304 METTL16Q86W50 562 aaKnown RBP8.07□□□□□ -1.12
CDC27-216ENST00000574304 EAF1Q96JC9 268 aaPredicted RBP8.07□□□□□ -1.12
CDC27-216ENST00000574304 NT5C1AQ9BXI3 368 aa8.07□□□□□ -1.12
CDC27-216ENST00000574304 KLHL3Q9UH77 587 aa8.07□□□□□ -1.12
CDC27-216ENST00000574304 DDX41Q9UJV9 622 aaKnown RBP8.07□□□□□ -1.12
CDC27-216ENST00000574304 PCDHB14Q9Y5E9 798 aa8.07□□□□□ -1.12
CDC27-216ENST00000574304 GNAT3A8MTJ3 354 aa8.06□□□□□ -1.12
CDC27-216ENST00000574304 RACK1P63244 317 aaKnown RBP8.06□□□□□ -1.12
CDC27-216ENST00000574304 ZNF746Q6NUN9 644 aaPredicted RBP8.06□□□□□ -1.12
CDC27-216ENST00000574304 CDH24Q86UP0 819 aa8.06□□□□□ -1.12
CDC27-216ENST00000574304 PLAGL2Q9UPG8 496 aa8.06□□□□□ -1.12
CDC27-216ENST00000574304 CNTNAP4Q9C0A0 1308 aa8.05□□□□□ -1.12
CDC27-216ENST00000574304 GP2P55259 537 aaKnown RBP8.05□□□□□ -1.12
CDC27-216ENST00000574304 HDLBPQ00341 1268 aaKnown RBP8.05□□□□□ -1.12
CDC27-216ENST00000574304 MLECQ14165 292 aa8.05□□□□□ -1.12
CDC27-216ENST00000574304 SFRP5Q5T4F7 317 aa8.05□□□□□ -1.12
CDC27-216ENST00000574304 CYB5D2Q8WUJ1 264 aa8.05□□□□□ -1.12
CDC27-216ENST00000574304 NKD1Q969G9 470 aa8.05□□□□□ -1.12
CDC27-216ENST00000574304 MISP3Q96FF7 219 aa8.05□□□□□ -1.12
CDC27-216ENST00000574304 TMEM265A0A087WTH1 108 aa8.04□□□□□ -1.12
CDC27-216ENST00000574304 CHURC1-FNTBB4DL54 471 aa8.04□□□□□ -1.12
CDC27-216ENST00000574304 DNAJA2O60884 412 aa8.04□□□□□ -1.12
CDC27-216ENST00000574304 MCM4P33991 863 aa8.04□□□□□ -1.12
CDC27-216ENST00000574304 C9orf131Q5VYM1 1079 aa8.04□□□□□ -1.12
CDC27-216ENST00000574304 NFXL1Q6ZNB6 911 aa8.04□□□□□ -1.12
CDC27-216ENST00000574304 NT5DC4Q86YG4 428 aa8.04□□□□□ -1.12
CDC27-216ENST00000574304 SLFN12Q8IYM2 578 aa8.04□□□□□ -1.12
CDC27-216ENST00000574304 ZNF654Q8IZM8 581 aa8.04□□□□□ -1.12
CDC27-216ENST00000574304 STK11IPQ8N1F8 1099 aa8.04□□□□□ -1.12
CDC27-216ENST00000574304 DNAJB8Q8NHS0 232 aa8.04□□□□□ -1.12
CDC27-216ENST00000574304 BCL7CQ8WUZ0 217 aaPredicted RBP8.04□□□□□ -1.12
CDC27-216ENST00000574304 ZNF428Q96B54 188 aa8.04□□□□□ -1.12
CDC27-216ENST00000574304 TNKS2Q9H2K2 1166 aa8.04□□□□□ -1.12
CDC27-216ENST00000574304 SLC5A6Q9Y289 635 aa8.04□□□□□ -1.12
CDC27-216ENST00000574304 PRR33A8MZF0 331 aa8.03□□□□□ -1.12
CDC27-216ENST00000574304 ATE1O95260 518 aa8.03□□□□□ -1.12
CDC27-216ENST00000574304 CYP7A1P22680 504 aa8.03□□□□□ -1.12
CDC27-216ENST00000574304 ETV3P41162 512 aa8.03□□□□□ -1.12
CDC27-216ENST00000574304 ZNF165P49910 485 aa8.03□□□□□ -1.12
CDC27-216ENST00000574304 NKPD1Q17RQ9 610 aa8.03□□□□□ -1.12
CDC27-216ENST00000574304 GK5Q6ZS86 529 aa8.03□□□□□ -1.12
CDC27-216ENST00000574304 C22orf34Q6ZV56 151 aa8.03□□□□□ -1.12
CDC27-216ENST00000574304 SLITRK4Q8IW52 837 aa8.03□□□□□ -1.12
CDC27-216ENST00000574304 SPACA3Q8IXA5 215 aa8.03□□□□□ -1.12
CDC27-216ENST00000574304 REXO1Q8N1G1 1221 aaKnown RBP8.03□□□□□ -1.12
CDC27-216ENST00000574304 FLCNQ8NFG4 579 aa8.03□□□□□ -1.12
CDC27-216ENST00000574304 HRASLS5Q96KN8 279 aa8.03□□□□□ -1.12
CDC27-216ENST00000574304 FBXL18Q96ME1 805 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms