RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 NFKBIBQ15653 356 aa11.34□□□□□ -0.59
NDE1-208ENST00000573694 MOB2Q70IA6 237 aa11.34□□□□□ -0.59
NDE1-208ENST00000573694 ZNF296Q8WUU4 475 aaPredicted RBP11.34□□□□□ -0.59
NDE1-208ENST00000573694 ZNF341Q9BYN7 854 aa11.34□□□□□ -0.59
NDE1-208ENST00000573694 NBPF3Q9H094 633 aa11.34□□□□□ -0.59
NDE1-208ENST00000573694 ZNF112Q9UJU3 913 aa11.34□□□□□ -0.59
NDE1-208ENST00000573694 CIZ1Q9ULV3 898 aaPredicted RBP11.34□□□□□ -0.59
NDE1-208ENST00000573694 CCDC85CA6NKD9 419 aa11.33□□□□□ -0.6
NDE1-208ENST00000573694 E7EWF7 191 aa11.33□□□□□ -0.6
NDE1-208ENST00000573694 PRKAB2O43741 272 aa11.33□□□□□ -0.6
NDE1-208ENST00000573694 SLC34A2O95436 690 aa11.33□□□□□ -0.6
NDE1-208ENST00000573694 PRDX5P30044 214 aa11.33□□□□□ -0.6
NDE1-208ENST00000573694 PRMT2P55345 433 aa11.33□□□□□ -0.6
NDE1-208ENST00000573694 GRIK5Q16478 980 aa11.33□□□□□ -0.6
NDE1-208ENST00000573694 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.33□□□□□ -0.6
NDE1-208ENST00000573694 TBC1D10CQ8IV04 446 aa11.33□□□□□ -0.6
NDE1-208ENST00000573694 MS4A4AQ96JQ5 239 aa11.33□□□□□ -0.6
NDE1-208ENST00000573694 NEK1Q96PY6 1258 aa11.33□□□□□ -0.6
NDE1-208ENST00000573694 LRRC2Q9BYS8 371 aa11.33□□□□□ -0.6
NDE1-208ENST00000573694 GAKO14976 1311 aa11.33□□□□□ -0.6
NDE1-208ENST00000573694 TCP10L2B9ZVM9 353 aa11.32□□□□□ -0.6
NDE1-208ENST00000573694 CXCL11O14625 94 aa11.32□□□□□ -0.6
NDE1-208ENST00000573694 TBC1D12O60347 775 aa11.32□□□□□ -0.6
NDE1-208ENST00000573694 DTNBO60941 627 aa11.32□□□□□ -0.6
NDE1-208ENST00000573694 APPP05067 770 aa11.32□□□□□ -0.6
NDE1-208ENST00000573694 DYNLL1P63167 89 aaKnown RBP11.32□□□□□ -0.6
NDE1-208ENST00000573694 MECOMQ03112 1051 aa11.32□□□□□ -0.6
NDE1-208ENST00000573694 PPIL2Q13356 520 aa11.32□□□□□ -0.6
NDE1-208ENST00000573694 SNAPC2Q13487 334 aa11.32□□□□□ -0.6
NDE1-208ENST00000573694 PKP1Q13835 747 aa11.32□□□□□ -0.6
NDE1-208ENST00000573694 RAB3GAP1Q15042 981 aa11.32□□□□□ -0.6
NDE1-208ENST00000573694 IMMTQ16891 758 aaKnown RBP11.32□□□□□ -0.6
NDE1-208ENST00000573694 NOL9Q5SY16 702 aaKnown RBP11.32□□□□□ -0.6
NDE1-208ENST00000573694 NAA16Q6N069 864 aaPredicted RBP11.32□□□□□ -0.6
NDE1-208ENST00000573694 NSUN4Q96CB9 384 aaKnown RBP11.32□□□□□ -0.6
NDE1-208ENST00000573694 ZFYVE28Q9HCC9 887 aa11.32□□□□□ -0.6
NDE1-208ENST00000573694 CTNNA3Q9UI47 895 aa11.32□□□□□ -0.6
NDE1-208ENST00000573694 TSKSQ9UJT2 592 aa11.32□□□□□ -0.6
NDE1-208ENST00000573694 TAOK2Q9UL54 1235 aa11.32□□□□□ -0.6
NDE1-208ENST00000573694 TPCN1Q9ULQ1 816 aa11.32□□□□□ -0.6
NDE1-208ENST00000573694 LIMCH1Q9UPQ0 1083 aa11.32□□□□□ -0.6
NDE1-208ENST00000573694 SSC5DA1L4H1 1573 aa11.32□□□□□ -0.6
NDE1-208ENST00000573694 ZMYM6O95789 1325 aa11.32□□□□□ -0.6
NDE1-208ENST00000573694 MYH1P12882 1939 aa11.31□□□□□ -0.6
NDE1-208ENST00000573694 MAGEB6P1A0A0J9YX57 407 aa11.31□□□□□ -0.6
NDE1-208ENST00000573694 GSG1L2A8MUP6 293 aa11.31□□□□□ -0.6
NDE1-208ENST00000573694 TBC1D8O95759 1140 aa11.31□□□□□ -0.6
NDE1-208ENST00000573694 PLCG2P16885 1265 aa11.31□□□□□ -0.6
NDE1-208ENST00000573694 ME3Q16798 604 aa11.31□□□□□ -0.6
NDE1-208ENST00000573694 CCDC83Q8IWF9 413 aa11.31□□□□□ -0.6
NDE1-208ENST00000573694 IL27Q8NEV9 243 aa11.31□□□□□ -0.6
NDE1-208ENST00000573694 NKX2-3Q8TAU0 364 aa11.31□□□□□ -0.6
NDE1-208ENST00000573694 OPTNQ96CV9 577 aa11.31□□□□□ -0.6
NDE1-208ENST00000573694 RIOK1Q9BRS2 568 aaKnown RBP11.31□□□□□ -0.6
NDE1-208ENST00000573694 TMEM39BQ9GZU3 492 aa11.31□□□□□ -0.6
NDE1-208ENST00000573694 GINM1Q9NU53 330 aa11.31□□□□□ -0.6
NDE1-208ENST00000573694 DAGLAQ9Y4D2 1042 aa11.31□□□□□ -0.6
NDE1-208ENST00000573694 TACC3Q9Y6A5 838 aa11.31□□□□□ -0.6
NDE1-208ENST00000573694 SLC4A4Q9Y6R1 1079 aa11.31□□□□□ -0.6
NDE1-208ENST00000573694 TCHHQ07283 1943 aa11.31□□□□□ -0.6
NDE1-208ENST00000573694 MYH15Q9Y2K3 1946 aa11.31□□□□□ -0.6
NDE1-208ENST00000573694 GPR75-ASB3A0A0A6YYF3 556 aa11.3□□□□□ -0.6
NDE1-208ENST00000573694 PATL2C9JE40 543 aaKnown RBP11.3□□□□□ -0.6
NDE1-208ENST00000573694 SP3Q02447 781 aa11.3□□□□□ -0.6
NDE1-208ENST00000573694 PRKG1Q13976 671 aa11.3□□□□□ -0.6
NDE1-208ENST00000573694 VGLL4Q14135 290 aa11.3□□□□□ -0.6
NDE1-208ENST00000573694 ALX1Q15699 326 aa11.3□□□□□ -0.6
NDE1-208ENST00000573694 CDC42EP5Q6NZY7 148 aa11.3□□□□□ -0.6
NDE1-208ENST00000573694 Q6ZUG5 572 aa11.3□□□□□ -0.6
NDE1-208ENST00000573694 CHST3Q7LGC8 479 aa11.3□□□□□ -0.6
NDE1-208ENST00000573694 MB21D2Q8IYB1 491 aaPredicted RBP11.3□□□□□ -0.6
NDE1-208ENST00000573694 IFNL3Q8IZI9 196 aa11.3□□□□□ -0.6
NDE1-208ENST00000573694 NECAB1Q8N987 351 aa11.3□□□□□ -0.6
NDE1-208ENST00000573694 SDR42E1Q8WUS8 393 aa11.3□□□□□ -0.6
NDE1-208ENST00000573694 INTS4Q96HW7 963 aaKnown RBP11.3□□□□□ -0.6
NDE1-208ENST00000573694 CLMNQ96JQ2 1002 aa11.3□□□□□ -0.6
NDE1-208ENST00000573694 NAPBQ9H115 298 aa11.3□□□□□ -0.6
NDE1-208ENST00000573694 ALDH8A1Q9H2A2 487 aaPredicted RBP11.3□□□□□ -0.6
NDE1-208ENST00000573694 KCNH4Q9UQ05 1017 aa11.3□□□□□ -0.6
NDE1-208ENST00000573694 SLC45A1Q9Y2W3 748 aa11.3□□□□□ -0.6
NDE1-208ENST00000573694 PCDHAC2Q9Y5I4 1007 aa11.3□□□□□ -0.6
NDE1-208ENST00000573694 NEDD4P46934 1319 aa11.3□□□□□ -0.6
NDE1-208ENST00000573694 ZNF213O14771 459 aa11.29□□□□□ -0.6
NDE1-208ENST00000573694 CTNND1O60716 968 aaKnown RBP11.29□□□□□ -0.6
NDE1-208ENST00000573694 GNAT2P19087 354 aa11.29□□□□□ -0.6
NDE1-208ENST00000573694 TDO2P48775 406 aa11.29□□□□□ -0.6
NDE1-208ENST00000573694 ANTXR2P58335 489 aa11.29□□□□□ -0.6
NDE1-208ENST00000573694 EXOSC10Q01780 885 aaKnown RBP11.29□□□□□ -0.6
NDE1-208ENST00000573694 CTDSPL2Q05D32 466 aa11.29□□□□□ -0.6
NDE1-208ENST00000573694 DHX32Q7L7V1 743 aaKnown RBP11.29□□□□□ -0.6
NDE1-208ENST00000573694 DZIP1Q86YF9 867 aaKnown RBP11.29□□□□□ -0.6
NDE1-208ENST00000573694 TNPO1Q92973 898 aaKnown RBP11.29□□□□□ -0.6
NDE1-208ENST00000573694 ZSCAN31Q96LW9 406 aaPredicted RBP11.29□□□□□ -0.6
NDE1-208ENST00000573694 WRNIP1Q96S55 665 aa11.29□□□□□ -0.6
NDE1-208ENST00000573694 DHX36Q9H2U1 1008 aaKnown RBP11.29□□□□□ -0.6
NDE1-208ENST00000573694 CWC22Q9HCG8 908 aaKnown RBP11.29□□□□□ -0.6
NDE1-208ENST00000573694 GPHNQ9NQX3 736 aaPredicted RBP11.29□□□□□ -0.6
NDE1-208ENST00000573694 SH2B1Q9NRF2 756 aaPredicted RBP11.29□□□□□ -0.6
NDE1-208ENST00000573694 USP40Q9NVE5 1235 aa11.29□□□□□ -0.6
NDE1-208ENST00000573694 SCAF8Q9UPN6 1271 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms