RNA–Protein interactions for RNA: ENST00000573095.1

HCFC1R1-204, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3

Gene HCFC1R1, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-204ENST00000573095 RHPN1Q8TCX5 695 aa23.56■■□□□ 1.36
HCFC1R1-204ENST00000573095 RNF208Q9H0X6 261 aa23.56■■□□□ 1.36
HCFC1R1-204ENST00000573095 ASCC2Q9H1I8 757 aaPredicted RBP23.56■■□□□ 1.36
HCFC1R1-204ENST00000573095 BIN2Q9UBW5 565 aaPredicted RBP23.56■■□□□ 1.36
HCFC1R1-204ENST00000573095 SAP30BPQ9UHR5 308 aaKnown RBP23.56■■□□□ 1.36
HCFC1R1-204ENST00000573095 ZBTB21Q9ULJ3 1066 aa23.56■■□□□ 1.36
HCFC1R1-204ENST00000573095 GDF11O95390 407 aa23.55■■□□□ 1.36
HCFC1R1-204ENST00000573095 COA7Q96BR5 231 aa23.55■■□□□ 1.36
HCFC1R1-204ENST00000573095 IL1RAPL2Q9NP60 686 aa23.55■■□□□ 1.36
HCFC1R1-204ENST00000573095 DDX19BQ9UMR2 479 aa23.55■■□□□ 1.36
HCFC1R1-204ENST00000573095 SHROOM1Q2M3G4 852 aaPredicted RBP23.54■■□□□ 1.36
HCFC1R1-204ENST00000573095 RPAP2Q8IXW5 612 aaPredicted RBP23.54■■□□□ 1.36
HCFC1R1-204ENST00000573095 TMOD4Q9NZQ9 345 aa23.54■■□□□ 1.36
HCFC1R1-204ENST00000573095 PLXNB2O15031 1838 aa23.54■■□□□ 1.36
HCFC1R1-204ENST00000573095 C19orf81C9J6K1 198 aa23.53■■□□□ 1.36
HCFC1R1-204ENST00000573095 INHAP05111 366 aa23.53■■□□□ 1.36
HCFC1R1-204ENST00000573095 ELNP15502 786 aa23.53■■□□□ 1.36
HCFC1R1-204ENST00000573095 HOXA7P31268 230 aaPredicted RBP23.53■■□□□ 1.36
HCFC1R1-204ENST00000573095 USP5P45974 858 aa23.53■■□□□ 1.36
HCFC1R1-204ENST00000573095 UBE2Q1Q7Z7E8 422 aa23.53■■□□□ 1.36
HCFC1R1-204ENST00000573095 KIF1BPQ96EK5 621 aa23.53■■□□□ 1.36
HCFC1R1-204ENST00000573095 UNC93B1Q9H1C4 597 aa23.53■■□□□ 1.36
HCFC1R1-204ENST00000573095 EHD4Q9H223 541 aa23.53■■□□□ 1.36
HCFC1R1-204ENST00000573095 ZBTB40Q9NUA8 1239 aa23.53■■□□□ 1.36
HCFC1R1-204ENST00000573095 MORF4L1Q9UBU8 362 aa23.53■■□□□ 1.36
HCFC1R1-204ENST00000573095 USP17L10C9JJH3 530 aa23.52■■□□□ 1.36
HCFC1R1-204ENST00000573095 HMMRO75330 724 aa23.52■■□□□ 1.36
HCFC1R1-204ENST00000573095 IRX3P78415 501 aaPredicted RBP23.52■■□□□ 1.36
HCFC1R1-204ENST00000573095 TTF1Q15361 905 aaPredicted RBP23.52■■□□□ 1.36
HCFC1R1-204ENST00000573095 CLASRPQ8N2M8 674 aaKnown RBP23.52■■□□□ 1.36
HCFC1R1-204ENST00000573095 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.52■■□□□ 1.36
HCFC1R1-204ENST00000573095 RIOK1Q9BRS2 568 aaKnown RBP23.52■■□□□ 1.36
HCFC1R1-204ENST00000573095 HABP4Q5JVS0 413 aaKnown RBP23.51■■□□□ 1.35
HCFC1R1-204ENST00000573095 U2AF1L4Q8WU68 220 aaKnown RBP23.51■■□□□ 1.35
HCFC1R1-204ENST00000573095 SERPINB13Q9UIV8 391 aa23.51■■□□□ 1.35
HCFC1R1-204ENST00000573095 COG6Q9Y2V7 657 aa23.51■■□□□ 1.35
HCFC1R1-204ENST00000573095 TATDN1Q6P1N9 297 aa23.5■■□□□ 1.35
HCFC1R1-204ENST00000573095 SIRT2Q8IXJ6 389 aa23.5■■□□□ 1.35
HCFC1R1-204ENST00000573095 PCDH10Q9P2E7 1040 aa23.5■■□□□ 1.35
HCFC1R1-204ENST00000573095 TTC6Q86TZ1 520 aa23.49■■□□□ 1.35
HCFC1R1-204ENST00000573095 CHMP4BQ9H444 224 aaKnown RBP23.49■■□□□ 1.35
HCFC1R1-204ENST00000573095 PAK6Q9NQU5 681 aaPredicted RBP23.49■■□□□ 1.35
HCFC1R1-204ENST00000573095 SGPL1O95470 568 aa23.48■■□□□ 1.35
HCFC1R1-204ENST00000573095 GH2P01242 217 aa23.48■■□□□ 1.35
HCFC1R1-204ENST00000573095 PDE6AP16499 860 aa23.48■■□□□ 1.35
HCFC1R1-204ENST00000573095 CAPN2P17655 700 aa23.48■■□□□ 1.35
HCFC1R1-204ENST00000573095 HERVK_113P62684 666 aa23.48■■□□□ 1.35
HCFC1R1-204ENST00000573095 TAOK2Q9UL54 1235 aa23.48■■□□□ 1.35
HCFC1R1-204ENST00000573095 MYH7P12883 1935 aa23.48■■□□□ 1.35
HCFC1R1-204ENST00000573095 MAGEB6P1A0A0J9YX57 407 aa23.47■■□□□ 1.35
HCFC1R1-204ENST00000573095 APBB1O00213 710 aa23.47■■□□□ 1.35
HCFC1R1-204ENST00000573095 RAB11FIP3O75154 756 aa23.47■■□□□ 1.35
HCFC1R1-204ENST00000573095 FARP2O94887 1054 aaPredicted RBP23.47■■□□□ 1.35
HCFC1R1-204ENST00000573095 IFIT2P09913 472 aaKnown RBP23.47■■□□□ 1.35
HCFC1R1-204ENST00000573095 USP17L2Q6R6M4 530 aa23.47■■□□□ 1.35
HCFC1R1-204ENST00000573095 GTF3C2Q8WUA4 911 aaPredicted RBP23.47■■□□□ 1.35
HCFC1R1-204ENST00000573095 C12orf42Q96LP6 360 aa23.47■■□□□ 1.35
HCFC1R1-204ENST00000573095 P2RX7Q99572 595 aaKnown RBP23.47■■□□□ 1.35
HCFC1R1-204ENST00000573095 RCAN3Q9UKA8 241 aa23.47■■□□□ 1.35
HCFC1R1-204ENST00000573095 GJD2Q9UKL4 321 aa23.47■■□□□ 1.35
HCFC1R1-204ENST00000573095 HMGCRP04035 888 aa23.46■■□□□ 1.35
HCFC1R1-204ENST00000573095 MYH8P13535 1937 aa23.46■■□□□ 1.35
HCFC1R1-204ENST00000573095 SLC9C2Q5TAH2 1124 aa23.46■■□□□ 1.35
HCFC1R1-204ENST00000573095 HTATIP2Q9BUP3 242 aa23.46■■□□□ 1.35
HCFC1R1-204ENST00000573095 EMILIN3Q9NT22 766 aa23.46■■□□□ 1.35
HCFC1R1-204ENST00000573095 H0YGN5 161 aa23.45■■□□□ 1.34
HCFC1R1-204ENST00000573095 GOLIM4O00461 696 aa23.45■■□□□ 1.34
HCFC1R1-204ENST00000573095 SHMT1P34896 483 aa23.45■■□□□ 1.34
HCFC1R1-204ENST00000573095 DEFB118Q96PH6 123 aa23.45■■□□□ 1.34
HCFC1R1-204ENST00000573095 DNAJC2Q99543 621 aaKnown RBP23.45■■□□□ 1.34
HCFC1R1-204ENST00000573095 CRNKL1Q9BZJ0 848 aaKnown RBP23.45■■□□□ 1.34
HCFC1R1-204ENST00000573095 TXNRD2Q9NNW7 524 aa23.45■■□□□ 1.34
HCFC1R1-204ENST00000573095 ZNF532Q9HCE3 1301 aa23.44■■□□□ 1.34
HCFC1R1-204ENST00000573095 TCRBV5S4A2TA0A5A2 114 aa23.44■■□□□ 1.34
HCFC1R1-204ENST00000573095 PLCD1P51178 756 aa23.44■■□□□ 1.34
HCFC1R1-204ENST00000573095 CERKLQ49MI3 558 aaPredicted RBP23.44■■□□□ 1.34
HCFC1R1-204ENST00000573095 GPRC5AQ8NFJ5 357 aa23.44■■□□□ 1.34
HCFC1R1-204ENST00000573095 FEZ1Q99689 392 aa23.44■■□□□ 1.34
HCFC1R1-204ENST00000573095 CRISPLD2Q9H0B8 497 aa23.44■■□□□ 1.34
HCFC1R1-204ENST00000573095 GABPAQ06546 454 aa23.43■■□□□ 1.34
HCFC1R1-204ENST00000573095 ABCB5Q2M3G0 1257 aa23.43■■□□□ 1.34
HCFC1R1-204ENST00000573095 SOCS4Q8WXH5 440 aa23.43■■□□□ 1.34
HCFC1R1-204ENST00000573095 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.43■■□□□ 1.34
HCFC1R1-204ENST00000573095 RBPJLQ9UBG7 517 aa23.43■■□□□ 1.34
HCFC1R1-204ENST00000573095 USP14P54578 494 aa23.42■■□□□ 1.34
HCFC1R1-204ENST00000573095 ERVK-9P63128 1117 aa23.42■■□□□ 1.34
HCFC1R1-204ENST00000573095 ERVK-24P63145 666 aa23.42■■□□□ 1.34
HCFC1R1-204ENST00000573095 RAB3GAP1Q15042 981 aa23.42■■□□□ 1.34
HCFC1R1-204ENST00000573095 DPF3Q92784 378 aa23.42■■□□□ 1.34
HCFC1R1-204ENST00000573095 KIAA1683Q9H0B3 1180 aa23.42■■□□□ 1.34
HCFC1R1-204ENST00000573095 COLQQ9Y215 455 aaPredicted RBP23.42■■□□□ 1.34
HCFC1R1-204ENST00000573095 ALPK3Q96L96 1907 aa23.41■■□□□ 1.34
HCFC1R1-204ENST00000573095 PEX10O60683 326 aa23.41■■□□□ 1.34
HCFC1R1-204ENST00000573095 POLR3DP05423 398 aaPredicted RBP23.41■■□□□ 1.34
HCFC1R1-204ENST00000573095 MAPK4P31152 587 aa23.41■■□□□ 1.34
HCFC1R1-204ENST00000573095 LCORLQ8N3X6 602 aa23.41■■□□□ 1.34
HCFC1R1-204ENST00000573095 EDC3Q96F86 508 aaKnown RBP23.41■■□□□ 1.34
HCFC1R1-204ENST00000573095 CABP5Q9NP86 173 aa23.41■■□□□ 1.34
HCFC1R1-204ENST00000573095 PAG1Q9NWQ8 432 aa23.41■■□□□ 1.34
HCFC1R1-204ENST00000573095 BAZ2AQ9UIF9 1905 aaKnown RBP23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms