RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 ERVK-9P63128 1117 aa12.61□□□□□ -0.39
CHMP6-203ENST00000572525 ERVK-24P63145 666 aa12.61□□□□□ -0.39
CHMP6-203ENST00000572525 SNX17Q15036 470 aa12.61□□□□□ -0.39
CHMP6-203ENST00000572525 GPR142Q7Z601 462 aa12.61□□□□□ -0.39
CHMP6-203ENST00000572525 PLEKHH3Q7Z736 793 aa12.61□□□□□ -0.39
CHMP6-203ENST00000572525 KLHDC4Q8TBB5 520 aa12.61□□□□□ -0.39
CHMP6-203ENST00000572525 MYLIPQ8WY64 445 aa12.61□□□□□ -0.39
CHMP6-203ENST00000572525 SENP6Q9GZR1 1112 aaPredicted RBP12.61□□□□□ -0.39
CHMP6-203ENST00000572525 CHD7Q9P2D1 2997 aa12.61□□□□□ -0.39
CHMP6-203ENST00000572525 REV3LO60673 3130 aa12.6□□□□□ -0.39
CHMP6-203ENST00000572525 ZNF316A6NFI3 1004 aaPredicted RBP12.6□□□□□ -0.39
CHMP6-203ENST00000572525 GLRX3O76003 335 aaKnown RBP12.6□□□□□ -0.39
CHMP6-203ENST00000572525 MAP2K5Q13163 448 aa12.6□□□□□ -0.39
CHMP6-203ENST00000572525 SHHQ15465 462 aa12.6□□□□□ -0.39
CHMP6-203ENST00000572525 C1orf53Q5VUE5 145 aa12.6□□□□□ -0.39
CHMP6-203ENST00000572525 MFSD14CQ5VZR4 134 aa12.6□□□□□ -0.39
CHMP6-203ENST00000572525 P2RX7Q99572 595 aaKnown RBP12.6□□□□□ -0.39
CHMP6-203ENST00000572525 TXNRD2Q9NNW7 524 aa12.6□□□□□ -0.39
CHMP6-203ENST00000572525 TMOD4Q9NZQ9 345 aa12.6□□□□□ -0.39
CHMP6-203ENST00000572525 RBPJLQ9UBG7 517 aa12.6□□□□□ -0.39
CHMP6-203ENST00000572525 DDX20Q9UHI6 824 aaKnown RBP12.6□□□□□ -0.39
CHMP6-203ENST00000572525 PTPRCP08575 1304 aa12.6□□□□□ -0.39
CHMP6-203ENST00000572525 IGHA2P01877 340 aa12.59□□□□□ -0.39
CHMP6-203ENST00000572525 SLURP2P0DP57 97 aa12.59□□□□□ -0.39
CHMP6-203ENST00000572525 PHKA1P46020 1223 aa12.59□□□□□ -0.39
CHMP6-203ENST00000572525 RTP1P59025 263 aa12.59□□□□□ -0.39
CHMP6-203ENST00000572525 CCNA1P78396 465 aa12.59□□□□□ -0.39
CHMP6-203ENST00000572525 PICALMQ13492 652 aa12.59□□□□□ -0.39
CHMP6-203ENST00000572525 CCL14Q16627 93 aa12.59□□□□□ -0.39
CHMP6-203ENST00000572525 USP44Q9H0E7 712 aa12.59□□□□□ -0.39
CHMP6-203ENST00000572525 CEP126Q9P2H0 1117 aa12.59□□□□□ -0.39
CHMP6-203ENST00000572525 PLXNA1Q9UIW2 1896 aa12.59□□□□□ -0.39
CHMP6-203ENST00000572525 A0A0G2JMZ2 1700 aa12.58□□□□□ -0.4
CHMP6-203ENST00000572525 USP17L10C9JJH3 530 aa12.58□□□□□ -0.4
CHMP6-203ENST00000572525 LDHCP07864 332 aa12.58□□□□□ -0.4
CHMP6-203ENST00000572525 MTMR2Q13614 643 aa12.58□□□□□ -0.4
CHMP6-203ENST00000572525 C9orf50Q5SZB4 431 aa12.58□□□□□ -0.4
CHMP6-203ENST00000572525 METTL16Q86W50 562 aaKnown RBP12.58□□□□□ -0.4
CHMP6-203ENST00000572525 CCAR1Q8IX12 1150 aaKnown RBP12.58□□□□□ -0.4
CHMP6-203ENST00000572525 EDC3Q96F86 508 aaKnown RBP12.58□□□□□ -0.4
CHMP6-203ENST00000572525 PORCNQ9H237 461 aa12.58□□□□□ -0.4
CHMP6-203ENST00000572525 DHX36Q9H2U1 1008 aaKnown RBP12.58□□□□□ -0.4
CHMP6-203ENST00000572525 RABGAP1Q9Y3P9 1069 aa12.58□□□□□ -0.4
CHMP6-203ENST00000572525 MYO5AQ9Y4I1 1855 aaKnown RBP12.58□□□□□ -0.4
CHMP6-203ENST00000572525 ARIH1Q9Y4X5 557 aaPredicted RBP12.58□□□□□ -0.4
CHMP6-203ENST00000572525 SLC15A5A6NIM6 579 aa12.57□□□□□ -0.4
CHMP6-203ENST00000572525 IL15P40933 162 aaPredicted RBP12.57□□□□□ -0.4
CHMP6-203ENST00000572525 GSTO1P78417 241 aa12.57□□□□□ -0.4
CHMP6-203ENST00000572525 RASGRF1Q13972 1273 aa12.57□□□□□ -0.4
CHMP6-203ENST00000572525 CCDC102BQ68D86 513 aa12.57□□□□□ -0.4
CHMP6-203ENST00000572525 LBX2Q6XYB7 198 aa12.57□□□□□ -0.4
CHMP6-203ENST00000572525 ERICH6Q7L0X2 663 aa12.57□□□□□ -0.4
CHMP6-203ENST00000572525 ARRDC4Q8NCT1 418 aa12.57□□□□□ -0.4
CHMP6-203ENST00000572525 ATXN2LQ8WWM7 1075 aaKnown RBP12.57□□□□□ -0.4
CHMP6-203ENST00000572525 PI4KBQ9UBF8 816 aa12.57□□□□□ -0.4
CHMP6-203ENST00000572525 PARP14Q460N5 1801 aa12.57□□□□□ -0.4
CHMP6-203ENST00000572525 FAM196BA6NMK8 535 aa12.56□□□□□ -0.4
CHMP6-203ENST00000572525 MECOMQ03112 1051 aa12.56□□□□□ -0.4
CHMP6-203ENST00000572525 GRB14Q14449 540 aa12.56□□□□□ -0.4
CHMP6-203ENST00000572525 RRP1BQ14684 758 aaKnown RBP12.56□□□□□ -0.4
CHMP6-203ENST00000572525 Q3C1V9 767 aa12.56□□□□□ -0.4
CHMP6-203ENST00000572525 SLC39A5Q6ZMH5 540 aa12.56□□□□□ -0.4
CHMP6-203ENST00000572525 C12orf42Q96LP6 360 aa12.56□□□□□ -0.4
CHMP6-203ENST00000572525 PDLIM7Q9NR12 457 aa12.56□□□□□ -0.4
CHMP6-203ENST00000572525 ABCF2Q9UG63 623 aa12.56□□□□□ -0.4
CHMP6-203ENST00000572525 GBF1Q92538 1859 aa12.56□□□□□ -0.4
CHMP6-203ENST00000572525 IGSF3O75054 1194 aa12.55□□□□□ -0.4
CHMP6-203ENST00000572525 CYBAP13498 195 aa12.55□□□□□ -0.4
CHMP6-203ENST00000572525 PTPREP23469 700 aa12.55□□□□□ -0.4
CHMP6-203ENST00000572525 HOXD11P31277 338 aaPredicted RBP12.55□□□□□ -0.4
CHMP6-203ENST00000572525 ATN1P54259 1190 aaPredicted RBP12.55□□□□□ -0.4
CHMP6-203ENST00000572525 ZNF384Q8TF68 577 aa12.55□□□□□ -0.4
CHMP6-203ENST00000572525 BADQ92934 168 aa12.55□□□□□ -0.4
CHMP6-203ENST00000572525 FAM122AQ96E09 287 aa12.55□□□□□ -0.4
CHMP6-203ENST00000572525 ATP11BQ9Y2G3 1177 aa12.55□□□□□ -0.4
CHMP6-203ENST00000572525 KBTBD13C9JR72 458 aa12.54□□□□□ -0.4
CHMP6-203ENST00000572525 AKNAD1Q5T1N1 836 aa12.54□□□□□ -0.4
CHMP6-203ENST00000572525 OLFML2BQ68BL8 750 aa12.54□□□□□ -0.4
CHMP6-203ENST00000572525 USP17L2Q6R6M4 530 aa12.54□□□□□ -0.4
CHMP6-203ENST00000572525 POTEEQ6S8J3 1075 aa12.54□□□□□ -0.4
CHMP6-203ENST00000572525 FOXP4Q8IVH2 680 aaPredicted RBP12.54□□□□□ -0.4
CHMP6-203ENST00000572525 NSUN4Q96CB9 384 aaKnown RBP12.54□□□□□ -0.4
CHMP6-203ENST00000572525 FLRT1Q9NZU1 646 aa12.54□□□□□ -0.4
CHMP6-203ENST00000572525 HDAC5Q9UQL6 1122 aa12.54□□□□□ -0.4
CHMP6-203ENST00000572525 IVNS1ABPQ9Y6Y0 642 aa12.54□□□□□ -0.4
CHMP6-203ENST00000572525 SYNGAP1Q96PV0 1343 aa12.54□□□□□ -0.4
CHMP6-203ENST00000572525 MYH8P13535 1937 aa12.54□□□□□ -0.4
CHMP6-203ENST00000572525 TCF20Q9UGU0 1960 aaKnown RBP12.54□□□□□ -0.4
CHMP6-203ENST00000572525 PLCG2P16885 1265 aa12.53□□□□□ -0.4
CHMP6-203ENST00000572525 ATP2B2Q01814 1243 aa12.53□□□□□ -0.4
CHMP6-203ENST00000572525 MVPQ14764 893 aaKnown RBP12.53□□□□□ -0.4
CHMP6-203ENST00000572525 USP38Q8NB14 1042 aa12.53□□□□□ -0.4
CHMP6-203ENST00000572525 RNPC3Q96LT9 517 aaKnown RBP12.53□□□□□ -0.4
CHMP6-203ENST00000572525 PAGR1Q9BTK6 254 aa12.53□□□□□ -0.4
CHMP6-203ENST00000572525 CWC22Q9HCG8 908 aaKnown RBP12.53□□□□□ -0.4
CHMP6-203ENST00000572525 COPRSQ9NQ92 184 aa12.53□□□□□ -0.4
CHMP6-203ENST00000572525 TACC3Q9Y6A5 838 aa12.53□□□□□ -0.4
CHMP6-203ENST00000572525 MUC6Q6W4X9 2439 aa12.52□□□□□ -0.4
CHMP6-203ENST00000572525 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.52□□□□□ -0.41
CHMP6-203ENST00000572525 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms