RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 PUS7LQ9H0K6 701 aaKnown RBP10.54□□□□□ -0.72
SMG6-210ENST00000572205 EHD4Q9H223 541 aa10.54□□□□□ -0.72
SMG6-210ENST00000572205 PALD1Q9ULE6 856 aa10.54□□□□□ -0.72
SMG6-210ENST00000572205 DOCK3Q8IZD9 2030 aa10.53□□□□□ -0.72
SMG6-210ENST00000572205 PITPNM1O00562 1244 aa10.53□□□□□ -0.72
SMG6-210ENST00000572205 PRKAB2O43741 272 aa10.53□□□□□ -0.72
SMG6-210ENST00000572205 MBD4O95243 580 aa10.53□□□□□ -0.72
SMG6-210ENST00000572205 PLCG2P16885 1265 aa10.53□□□□□ -0.72
SMG6-210ENST00000572205 SHMT1P34896 483 aa10.53□□□□□ -0.72
SMG6-210ENST00000572205 PLCD1P51178 756 aa10.53□□□□□ -0.72
SMG6-210ENST00000572205 PDE1AP54750 535 aa10.53□□□□□ -0.72
SMG6-210ENST00000572205 NUCB1Q02818 461 aa10.53□□□□□ -0.72
SMG6-210ENST00000572205 SREBF2Q12772 1141 aa10.53□□□□□ -0.72
SMG6-210ENST00000572205 CRHR2Q13324 411 aa10.53□□□□□ -0.72
SMG6-210ENST00000572205 GPAT2Q6NUI2 795 aa10.53□□□□□ -0.72
SMG6-210ENST00000572205 SDR42E1Q8WUS8 393 aa10.53□□□□□ -0.72
SMG6-210ENST00000572205 OSBP2Q969R2 916 aa10.53□□□□□ -0.72
SMG6-210ENST00000572205 HOOK2Q96ED9 719 aa10.53□□□□□ -0.72
SMG6-210ENST00000572205 ARMT1Q9H993 441 aa10.53□□□□□ -0.72
SMG6-210ENST00000572205 EPB41L4AQ9HCS5 686 aaPredicted RBP10.53□□□□□ -0.72
SMG6-210ENST00000572205 DCP1AQ9NPI6 582 aaPredicted RBP10.53□□□□□ -0.72
SMG6-210ENST00000572205 HERC5Q9UII4 1024 aaKnown RBP10.53□□□□□ -0.72
SMG6-210ENST00000572205 AFG3L2Q9Y4W6 797 aa10.53□□□□□ -0.72
SMG6-210ENST00000572205 CSADQ9Y600 493 aa10.53□□□□□ -0.72
SMG6-210ENST00000572205 A0A0G2JLL6 359 aaPredicted RBP10.52□□□□□ -0.73
SMG6-210ENST00000572205 MAGEB6P1A0A0J9YX57 407 aa10.52□□□□□ -0.73
SMG6-210ENST00000572205 BTBD19C9JJ37 291 aa10.52□□□□□ -0.73
SMG6-210ENST00000572205 M0R2C6 588 aa10.52□□□□□ -0.73
SMG6-210ENST00000572205 CTNND1O60716 968 aaKnown RBP10.52□□□□□ -0.73
SMG6-210ENST00000572205 TBC1D8O95759 1140 aa10.52□□□□□ -0.73
SMG6-210ENST00000572205 BAG3O95817 575 aa10.52□□□□□ -0.73
SMG6-210ENST00000572205 CYP2D6P10635 497 aa10.52□□□□□ -0.73
SMG6-210ENST00000572205 PDE4AP27815 886 aa10.52□□□□□ -0.73
SMG6-210ENST00000572205 GUCY1A2P33402 732 aa10.52□□□□□ -0.73
SMG6-210ENST00000572205 CAP2P40123 477 aa10.52□□□□□ -0.73
SMG6-210ENST00000572205 DGKZQ13574 1117 aa10.52□□□□□ -0.73
SMG6-210ENST00000572205 SLC4A8Q2Y0W8 1093 aa10.52□□□□□ -0.73
SMG6-210ENST00000572205 TATDN1Q6P1N9 297 aa10.52□□□□□ -0.73
SMG6-210ENST00000572205 PRRT2Q7Z6L0 340 aaPredicted RBP10.52□□□□□ -0.73
SMG6-210ENST00000572205 CERS3Q8IU89 383 aa10.52□□□□□ -0.73
SMG6-210ENST00000572205 ZNF296Q8WUU4 475 aaPredicted RBP10.52□□□□□ -0.73
SMG6-210ENST00000572205 DHX36Q9H2U1 1008 aaKnown RBP10.52□□□□□ -0.73
SMG6-210ENST00000572205 SAP30BPQ9UHR5 308 aaKnown RBP10.52□□□□□ -0.73
SMG6-210ENST00000572205 CCL15-CCL14A0A0B4J2E2 113 aa10.51□□□□□ -0.73
SMG6-210ENST00000572205 GPR25O00155 361 aa10.51□□□□□ -0.73
SMG6-210ENST00000572205 PSEN1P49768 467 aa10.51□□□□□ -0.73
SMG6-210ENST00000572205 GTF2A2P52657 109 aa10.51□□□□□ -0.73
SMG6-210ENST00000572205 E2F4Q16254 413 aa10.51□□□□□ -0.73
SMG6-210ENST00000572205 CCL15Q16663 113 aa10.51□□□□□ -0.73
SMG6-210ENST00000572205 LNPKQ9C0E8 428 aa10.51□□□□□ -0.73
SMG6-210ENST00000572205 OSBPL3Q9H4L5 887 aa10.51□□□□□ -0.73
SMG6-210ENST00000572205 PI4KBQ9UBF8 816 aa10.51□□□□□ -0.73
SMG6-210ENST00000572205 ZNF236Q9UL36 1845 aa10.51□□□□□ -0.73
SMG6-210ENST00000572205 FRMPD3Q5JV73 1810 aa10.5□□□□□ -0.73
SMG6-210ENST00000572205 CYP2D7A0A087X1C5 515 aa10.5□□□□□ -0.73
SMG6-210ENST00000572205 GLRX3O76003 335 aaKnown RBP10.5□□□□□ -0.73
SMG6-210ENST00000572205 CTGFP29279 349 aa10.5□□□□□ -0.73
SMG6-210ENST00000572205 INHBEP58166 350 aa10.5□□□□□ -0.73
SMG6-210ENST00000572205 ANKRD45Q5TZF3 282 aa10.5□□□□□ -0.73
SMG6-210ENST00000572205 POTEEQ6S8J3 1075 aa10.5□□□□□ -0.73
SMG6-210ENST00000572205 PLEKHM2Q8IWE5 1019 aa10.5□□□□□ -0.73
SMG6-210ENST00000572205 ZSCAN29Q8IWY8 852 aaPredicted RBP10.5□□□□□ -0.73
SMG6-210ENST00000572205 SLC44A5Q8NCS7 719 aa10.5□□□□□ -0.73
SMG6-210ENST00000572205 APPBP2Q92624 585 aa10.5□□□□□ -0.73
SMG6-210ENST00000572205 STRBPQ96SI9 672 aaKnown RBP10.5□□□□□ -0.73
SMG6-210ENST00000572205 SEC62Q99442 399 aaKnown RBP10.5□□□□□ -0.73
SMG6-210ENST00000572205 BCL11AQ9H165 835 aa10.5□□□□□ -0.73
SMG6-210ENST00000572205 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.5□□□□□ -0.73
SMG6-210ENST00000572205 ZCCHC17Q9NP64 241 aaKnown RBP10.5□□□□□ -0.73
SMG6-210ENST00000572205 ZBTB21Q9ULJ3 1066 aa10.5□□□□□ -0.73
SMG6-210ENST00000572205 GSG1L2A8MUP6 293 aa10.49□□□□□ -0.73
SMG6-210ENST00000572205 GDF11O95390 407 aa10.49□□□□□ -0.73
SMG6-210ENST00000572205 SNAPC2Q13487 334 aa10.49□□□□□ -0.73
SMG6-210ENST00000572205 ZMYM1Q5SVZ6 1142 aa10.49□□□□□ -0.73
SMG6-210ENST00000572205 TREML2Q5T2D2 321 aa10.49□□□□□ -0.73
SMG6-210ENST00000572205 ANKRD23Q86SG2 305 aa10.49□□□□□ -0.73
SMG6-210ENST00000572205 CHD1LQ86WJ1 897 aa10.49□□□□□ -0.73
SMG6-210ENST00000572205 FBXO22Q8NEZ5 403 aa10.49□□□□□ -0.73
SMG6-210ENST00000572205 SERPINB13Q9UIV8 391 aa10.49□□□□□ -0.73
SMG6-210ENST00000572205 CXCL11O14625 94 aa10.48□□□□□ -0.73
SMG6-210ENST00000572205 RNF113AO15541 343 aaKnown RBP10.48□□□□□ -0.73
SMG6-210ENST00000572205 GPAA1O43292 621 aa10.48□□□□□ -0.73
SMG6-210ENST00000572205 ALDH1A1P00352 501 aa10.48□□□□□ -0.73
SMG6-210ENST00000572205 BCRP11274 1271 aa10.48□□□□□ -0.73
SMG6-210ENST00000572205 CETPP11597 493 aa10.48□□□□□ -0.73
SMG6-210ENST00000572205 GSPT1P15170 499 aaKnown RBP10.48□□□□□ -0.73
SMG6-210ENST00000572205 SH3D19Q5HYK7 790 aa10.48□□□□□ -0.73
SMG6-210ENST00000572205 C12orf60Q5U649 245 aa10.48□□□□□ -0.73
SMG6-210ENST00000572205 NOL10Q9BSC4 688 aaKnown RBP10.48□□□□□ -0.73
SMG6-210ENST00000572205 BEGAINQ9BUH8 593 aa10.48□□□□□ -0.73
SMG6-210ENST00000572205 WDR18Q9BV38 432 aa10.48□□□□□ -0.73
SMG6-210ENST00000572205 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.48□□□□□ -0.73
SMG6-210ENST00000572205 CRNKL1Q9BZJ0 848 aaKnown RBP10.48□□□□□ -0.73
SMG6-210ENST00000572205 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.48□□□□□ -0.73
SMG6-210ENST00000572205 MCOLN1Q9GZU1 580 aa10.48□□□□□ -0.73
SMG6-210ENST00000572205 IL25Q9H293 177 aa10.48□□□□□ -0.73
SMG6-210ENST00000572205 TACC3Q9Y6A5 838 aa10.48□□□□□ -0.73
SMG6-210ENST00000572205 ZHX2Q9Y6X8 837 aa10.48□□□□□ -0.73
SMG6-210ENST00000572205 LCTP09848 1927 aa10.47□□□□□ -0.73
SMG6-210ENST00000572205 A0A0D9SFI3 127 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms