RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 INTS5Q6P9B9 1019 aaKnown RBP18.49■□□□□ 0.55
RAB40B-206ENST00000571995 LRRC8AQ8IWT6 810 aa18.49■□□□□ 0.55
RAB40B-206ENST00000571995 FMR1NBQ8N0W7 255 aaPredicted RBP18.49■□□□□ 0.55
RAB40B-206ENST00000571995 TDRD7Q8NHU6 1098 aaKnown RBP18.49■□□□□ 0.55
RAB40B-206ENST00000571995 CEP131Q9UPN4 1083 aa18.49■□□□□ 0.55
RAB40B-206ENST00000571995 CACNB3P54284 484 aa18.49■□□□□ 0.55
RAB40B-206ENST00000571995 CCDC178Q5BJE1 867 aa18.49■□□□□ 0.55
RAB40B-206ENST00000571995 ZSCAN10Q96SZ4 725 aaPredicted RBP18.49■□□□□ 0.55
RAB40B-206ENST00000571995 FUCA2Q9BTY2 467 aa18.49■□□□□ 0.55
RAB40B-206ENST00000571995 ZC3H12CQ9C0D7 883 aaKnown RBP18.49■□□□□ 0.55
RAB40B-206ENST00000571995 VPS16Q9H269 839 aa18.49■□□□□ 0.55
RAB40B-206ENST00000571995 ZNF804BA4D1E1 1349 aa18.49■□□□□ 0.55
RAB40B-206ENST00000571995 KRT18P05783 430 aaKnown RBP18.49■□□□□ 0.55
RAB40B-206ENST00000571995 FILIP1LQ4L180 1135 aa18.49■□□□□ 0.55
RAB40B-206ENST00000571995 TEX35Q5T0J7 233 aa18.49■□□□□ 0.55
RAB40B-206ENST00000571995 FRMPD2Q68DX3 1309 aaPredicted RBP18.48■□□□□ 0.55
RAB40B-206ENST00000571995 TMEM232C9JQI7 657 aa18.48■□□□□ 0.55
RAB40B-206ENST00000571995 ARHGEF1Q92888 912 aaKnown RBP18.48■□□□□ 0.55
RAB40B-206ENST00000571995 FMN2Q9NZ56 1722 aa18.48■□□□□ 0.55
RAB40B-206ENST00000571995 CAMTA2O94983 1202 aa18.48■□□□□ 0.55
RAB40B-206ENST00000571995 NFIXQ14938 502 aa18.48■□□□□ 0.55
RAB40B-206ENST00000571995 ZNF34Q8IZ26 560 aa18.48■□□□□ 0.55
RAB40B-206ENST00000571995 TMTC2Q8N394 836 aa18.48■□□□□ 0.55
RAB40B-206ENST00000571995 FAM196BA6NMK8 535 aa18.48■□□□□ 0.55
RAB40B-206ENST00000571995 NLRP12P59046 1061 aa18.48■□□□□ 0.55
RAB40B-206ENST00000571995 SHC4Q6S5L8 630 aa18.48■□□□□ 0.55
RAB40B-206ENST00000571995 CLEC10AQ8IUN9 316 aa18.48■□□□□ 0.55
RAB40B-206ENST00000571995 MYRIPQ8NFW9 859 aa18.48■□□□□ 0.55
RAB40B-206ENST00000571995 N4BP3O15049 544 aa18.47■□□□□ 0.55
RAB40B-206ENST00000571995 CMA1P23946 247 aa18.47■□□□□ 0.55
RAB40B-206ENST00000571995 TNNI2P48788 182 aa18.47■□□□□ 0.55
RAB40B-206ENST00000571995 NYXQ9GZU5 481 aa18.47■□□□□ 0.55
RAB40B-206ENST00000571995 MROH7-TTC4A0A0A0MT08 1334 aa18.47■□□□□ 0.55
RAB40B-206ENST00000571995 ERVV-1B6SEH8 477 aa18.47■□□□□ 0.55
RAB40B-206ENST00000571995 FOXP2O15409 715 aa18.47■□□□□ 0.55
RAB40B-206ENST00000571995 PRR29P0C7W0 189 aa18.47■□□□□ 0.55
RAB40B-206ENST00000571995 LRRC47Q8N1G4 583 aaKnown RBP18.47■□□□□ 0.55
RAB40B-206ENST00000571995 IGDCC4Q8TDY8 1250 aa18.47■□□□□ 0.55
RAB40B-206ENST00000571995 COL5A2P05997 1499 aaPredicted RBP18.47■□□□□ 0.55
RAB40B-206ENST00000571995 POSTNQ15063 836 aa18.47■□□□□ 0.55
RAB40B-206ENST00000571995 FAM84BQ96KN1 310 aaPredicted RBP18.47■□□□□ 0.55
RAB40B-206ENST00000571995 PRIMPOLQ96LW4 560 aa18.47■□□□□ 0.55
RAB40B-206ENST00000571995 NUP88Q99567 741 aaPredicted RBP18.47■□□□□ 0.55
RAB40B-206ENST00000571995 ST5P78524 1137 aa18.46■□□□□ 0.55
RAB40B-206ENST00000571995 ZYXQ15942 572 aaKnown RBP18.46■□□□□ 0.55
RAB40B-206ENST00000571995 DPF2Q92785 391 aa18.46■□□□□ 0.55
RAB40B-206ENST00000571995 NBPF3Q9H094 633 aa18.46■□□□□ 0.55
RAB40B-206ENST00000571995 CBFA2T2O43439 604 aa18.46■□□□□ 0.54
RAB40B-206ENST00000571995 KIF5BP33176 963 aa18.46■□□□□ 0.54
RAB40B-206ENST00000571995 SAMSN1Q9NSI8 373 aaKnown RBP18.46■□□□□ 0.54
RAB40B-206ENST00000571995 POLR3EQ9NVU0 708 aa18.46■□□□□ 0.54
RAB40B-206ENST00000571995 STAT6P42226 847 aa18.45■□□□□ 0.54
RAB40B-206ENST00000571995 INF2Q27J81 1249 aa18.45■□□□□ 0.54
RAB40B-206ENST00000571995 KIAA0825Q8IV33 1275 aa18.45■□□□□ 0.54
RAB40B-206ENST00000571995 ENAHQ8N8S7 591 aaPredicted RBP18.45■□□□□ 0.54
RAB40B-206ENST00000571995 PTGDRQ13258 359 aa18.45■□□□□ 0.54
RAB40B-206ENST00000571995 FBXO3Q9UK99 471 aa18.45■□□□□ 0.54
RAB40B-206ENST00000571995 ZNF215Q9UL58 517 aaPredicted RBP18.45■□□□□ 0.54
RAB40B-206ENST00000571995 CTNND2Q9UQB3 1225 aa18.45■□□□□ 0.54
RAB40B-206ENST00000571995 ELF2Q15723 593 aa18.45■□□□□ 0.54
RAB40B-206ENST00000571995 RILPL1Q5EBL4 403 aa18.45■□□□□ 0.54
RAB40B-206ENST00000571995 TTC38Q5R3I4 469 aa18.45■□□□□ 0.54
RAB40B-206ENST00000571995 RASGRP2Q7LDG7 609 aa18.45■□□□□ 0.54
RAB40B-206ENST00000571995 ZNF804AQ7Z570 1209 aa18.45■□□□□ 0.54
RAB40B-206ENST00000571995 KRBA2Q6ZNG9 492 aa18.44■□□□□ 0.54
RAB40B-206ENST00000571995 ERICH4A6NGS2 130 aa18.44■□□□□ 0.54
RAB40B-206ENST00000571995 DHX40Q8IX18 779 aaKnown RBP18.44■□□□□ 0.54
RAB40B-206ENST00000571995 PNMA1Q8ND90 353 aa18.44■□□□□ 0.54
RAB40B-206ENST00000571995 MXD3Q9BW11 206 aa18.44■□□□□ 0.54
RAB40B-206ENST00000571995 MED1Q15648 1581 aaPredicted RBP18.44■□□□□ 0.54
RAB40B-206ENST00000571995 IPO7O95373 1038 aaKnown RBP18.44■□□□□ 0.54
RAB40B-206ENST00000571995 IQCB1Q15051 598 aa18.44■□□□□ 0.54
RAB40B-206ENST00000571995 RBM26Q5T8P6 1007 aaKnown RBP18.44■□□□□ 0.54
RAB40B-206ENST00000571995 SYMPKQ92797 1274 aaKnown RBP18.44■□□□□ 0.54
RAB40B-206ENST00000571995 MAGEC2Q9UBF1 373 aaPredicted RBP18.44■□□□□ 0.54
RAB40B-206ENST00000571995 TOPAZ1Q8N9V7 1692 aa18.43■□□□□ 0.54
RAB40B-206ENST00000571995 CUTAO60888 179 aa18.43■□□□□ 0.54
RAB40B-206ENST00000571995 SPTY2D1Q68D10 685 aaPredicted RBP18.43■□□□□ 0.54
RAB40B-206ENST00000571995 USP17L2Q6R6M4 530 aa18.43■□□□□ 0.54
RAB40B-206ENST00000571995 UBXN4Q92575 508 aa18.43■□□□□ 0.54
RAB40B-206ENST00000571995 CCDC47Q96A33 483 aaKnown RBP18.43■□□□□ 0.54
RAB40B-206ENST00000571995 HINFPQ9BQA5 517 aa18.43■□□□□ 0.54
RAB40B-206ENST00000571995 ZMYND15Q9H091 742 aa18.43■□□□□ 0.54
RAB40B-206ENST00000571995 CAVIN2O95810 425 aa18.43■□□□□ 0.54
RAB40B-206ENST00000571995 RGPD1P0DJD0 1748 aa18.43■□□□□ 0.54
RAB40B-206ENST00000571995 TXKP42681 527 aa18.43■□□□□ 0.54
RAB40B-206ENST00000571995 GSDMDP57764 484 aa18.43■□□□□ 0.54
RAB40B-206ENST00000571995 CDCA7Q9BWT1 371 aaPredicted RBP18.43■□□□□ 0.54
RAB40B-206ENST00000571995 BIN2Q9UBW5 565 aaPredicted RBP18.43■□□□□ 0.54
RAB40B-206ENST00000571995 POLR3GO15318 223 aaPredicted RBP18.42■□□□□ 0.54
RAB40B-206ENST00000571995 MMP1P03956 469 aa18.42■□□□□ 0.54
RAB40B-206ENST00000571995 SH3RF3Q8TEJ3 882 aaPredicted RBP18.42■□□□□ 0.54
RAB40B-206ENST00000571995 CDHR2Q9BYE9 1310 aa18.42■□□□□ 0.54
RAB40B-206ENST00000571995 NTSR2O95665 410 aa18.42■□□□□ 0.54
RAB40B-206ENST00000571995 LDHCP07864 332 aa18.42■□□□□ 0.54
RAB40B-206ENST00000571995 ARHGAP29Q52LW3 1261 aa18.42■□□□□ 0.54
RAB40B-206ENST00000571995 DRC1Q96MC2 740 aa18.42■□□□□ 0.54
RAB40B-206ENST00000571995 GGA1Q9UJY5 639 aa18.42■□□□□ 0.54
RAB40B-206ENST00000571995 FMNL1O95466 1100 aaPredicted RBP18.42■□□□□ 0.54
RAB40B-206ENST00000571995 VEGFAP15692 232 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms