RNA–Protein interactions for RNA: ENST00000571459.5

LITAF-207, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-207ENST00000571459 TAOK2Q9UL54 1235 aa12.24□□□□□ -0.45
LITAF-207ENST00000571459 SPDYE5A6NIY4 337 aa12.23□□□□□ -0.45
LITAF-207ENST00000571459 GH2P01242 217 aa12.23□□□□□ -0.45
LITAF-207ENST00000571459 PTPRAP18433 802 aa12.23□□□□□ -0.45
LITAF-207ENST00000571459 GJA5P36382 358 aa12.23□□□□□ -0.45
LITAF-207ENST00000571459 HAND2P61296 217 aa12.23□□□□□ -0.45
LITAF-207ENST00000571459 CTDSPL2Q05D32 466 aa12.23□□□□□ -0.45
LITAF-207ENST00000571459 NOGQ13253 232 aa12.23□□□□□ -0.45
LITAF-207ENST00000571459 ABCB5Q2M3G0 1257 aa12.23□□□□□ -0.45
LITAF-207ENST00000571459 SHROOM1Q2M3G4 852 aaPredicted RBP12.23□□□□□ -0.45
LITAF-207ENST00000571459 ZIC5Q96T25 663 aa12.23□□□□□ -0.45
LITAF-207ENST00000571459 DSCC1Q9BVC3 393 aa12.23□□□□□ -0.45
LITAF-207ENST00000571459 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.23□□□□□ -0.45
LITAF-207ENST00000571459 ZHX2Q9Y6X8 837 aa12.23□□□□□ -0.45
LITAF-207ENST00000571459 DOCK1Q14185 1865 aa12.23□□□□□ -0.45
LITAF-207ENST00000571459 LAMB1P07942 1786 aa12.23□□□□□ -0.45
LITAF-207ENST00000571459 MPHOSPH10O00566 681 aaKnown RBP12.22□□□□□ -0.45
LITAF-207ENST00000571459 ZNF213O14771 459 aa12.22□□□□□ -0.45
LITAF-207ENST00000571459 PRDM1O75626 825 aa12.22□□□□□ -0.45
LITAF-207ENST00000571459 ASNSP08243 561 aa12.22□□□□□ -0.45
LITAF-207ENST00000571459 ZBTB48P10074 688 aaPredicted RBP12.22□□□□□ -0.45
LITAF-207ENST00000571459 KIF23Q02241 960 aaPredicted RBP12.22□□□□□ -0.45
LITAF-207ENST00000571459 PPATQ06203 517 aa12.22□□□□□ -0.45
LITAF-207ENST00000571459 CCDC84Q86UT8 332 aaPredicted RBP12.22□□□□□ -0.45
LITAF-207ENST00000571459 CABP5Q9NP86 173 aa12.22□□□□□ -0.45
LITAF-207ENST00000571459 INCENPQ9NQS7 918 aa12.22□□□□□ -0.45
LITAF-207ENST00000571459 CTNNA3Q9UI47 895 aa12.22□□□□□ -0.45
LITAF-207ENST00000571459 ANAPC4Q9UJX5 808 aa12.22□□□□□ -0.45
LITAF-207ENST00000571459 ZBTB21Q9ULJ3 1066 aa12.22□□□□□ -0.45
LITAF-207ENST00000571459 ZMYM6O95789 1325 aa12.21□□□□□ -0.45
LITAF-207ENST00000571459 IRF6O14896 467 aa12.21□□□□□ -0.45
LITAF-207ENST00000571459 AKR1B1P15121 316 aa12.21□□□□□ -0.45
LITAF-207ENST00000571459 MAP2K2P36507 400 aa12.21□□□□□ -0.45
LITAF-207ENST00000571459 PDE4BQ07343 736 aa12.21□□□□□ -0.45
LITAF-207ENST00000571459 PPIL2Q13356 520 aa12.21□□□□□ -0.45
LITAF-207ENST00000571459 RAB3GAP1Q15042 981 aa12.21□□□□□ -0.45
LITAF-207ENST00000571459 MAP4K1Q92918 833 aa12.21□□□□□ -0.45
LITAF-207ENST00000571459 ZNF287Q9HBT7 754 aa12.21□□□□□ -0.45
LITAF-207ENST00000571459 ANO2Q9NQ90 1003 aa12.21□□□□□ -0.45
LITAF-207ENST00000571459 GINM1Q9NU53 330 aa12.21□□□□□ -0.45
LITAF-207ENST00000571459 ROBO3Q96MS0 1386 aa12.2□□□□□ -0.46
LITAF-207ENST00000571459 USP17L5A8MUK1 530 aa12.2□□□□□ -0.46
LITAF-207ENST00000571459 RASA1P20936 1047 aa12.2□□□□□ -0.46
LITAF-207ENST00000571459 SPP2Q13103 211 aa12.2□□□□□ -0.46
LITAF-207ENST00000571459 SEPT2Q15019 361 aa12.2□□□□□ -0.46
LITAF-207ENST00000571459 IMMTQ16891 758 aaKnown RBP12.2□□□□□ -0.46
LITAF-207ENST00000571459 ZNF444Q8N0Y2 327 aaPredicted RBP12.2□□□□□ -0.46
LITAF-207ENST00000571459 CCDC17Q96LX7 622 aa12.2□□□□□ -0.46
LITAF-207ENST00000571459 LSG1Q9H089 658 aaKnown RBP12.2□□□□□ -0.46
LITAF-207ENST00000571459 NBPF3Q9H094 633 aa12.2□□□□□ -0.46
LITAF-207ENST00000571459 AFG3L2Q9Y4W6 797 aa12.2□□□□□ -0.46
LITAF-207ENST00000571459 TACC3Q9Y6A5 838 aa12.2□□□□□ -0.46
LITAF-207ENST00000571459 U3KPZ7 1027 aaPredicted RBP12.2□□□□□ -0.46
LITAF-207ENST00000571459 PHIPQ8WWQ0 1821 aa12.2□□□□□ -0.46
LITAF-207ENST00000571459 MANSC4A6NHS7 340 aaPredicted RBP12.19□□□□□ -0.46
LITAF-207ENST00000571459 TRIM75PA6NK02 468 aa12.19□□□□□ -0.46
LITAF-207ENST00000571459 GUCY1A2P33402 732 aa12.19□□□□□ -0.46
LITAF-207ENST00000571459 GTF2A2P52657 109 aa12.19□□□□□ -0.46
LITAF-207ENST00000571459 SNAPC2Q13487 334 aa12.19□□□□□ -0.46
LITAF-207ENST00000571459 FAM47AQ5JRC9 791 aa12.19□□□□□ -0.46
LITAF-207ENST00000571459 RRP12Q5JTH9 1297 aaKnown RBP12.19□□□□□ -0.46
LITAF-207ENST00000571459 AKNAD1Q5T1N1 836 aa12.19□□□□□ -0.46
LITAF-207ENST00000571459 MFSD6Q6ZSS7 791 aa12.19□□□□□ -0.46
LITAF-207ENST00000571459 TMEM179Q6ZVK1 233 aa12.19□□□□□ -0.46
LITAF-207ENST00000571459 TBC1D10CQ8IV04 446 aa12.19□□□□□ -0.46
LITAF-207ENST00000571459 ZNF280CQ8ND82 737 aa12.19□□□□□ -0.46
LITAF-207ENST00000571459 MS4A4AQ96JQ5 239 aa12.19□□□□□ -0.46
LITAF-207ENST00000571459 WDR18Q9BV38 432 aa12.19□□□□□ -0.46
LITAF-207ENST00000571459 AS3MTQ9HBK9 375 aa12.19□□□□□ -0.46
LITAF-207ENST00000571459 TOMM22Q9NS69 142 aa12.19□□□□□ -0.46
LITAF-207ENST00000571459 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.19□□□□□ -0.46
LITAF-207ENST00000571459 CCL15-CCL14A0A0B4J2E2 113 aa12.18□□□□□ -0.46
LITAF-207ENST00000571459 CXCL11O14625 94 aa12.18□□□□□ -0.46
LITAF-207ENST00000571459 ORC4O43929 436 aa12.18□□□□□ -0.46
LITAF-207ENST00000571459 RANBP6O60518 1105 aaKnown RBP12.18□□□□□ -0.46
LITAF-207ENST00000571459 INHBEP58166 350 aa12.18□□□□□ -0.46
LITAF-207ENST00000571459 TFAP4Q01664 338 aa12.18□□□□□ -0.46
LITAF-207ENST00000571459 CCL15Q16663 113 aa12.18□□□□□ -0.46
LITAF-207ENST00000571459 REM2Q8IYK8 340 aaPredicted RBP12.18□□□□□ -0.46
LITAF-207ENST00000571459 KCNH4Q9UQ05 1017 aa12.18□□□□□ -0.46
LITAF-207ENST00000571459 RBM8AQ9Y5S9 174 aaKnown RBP12.18□□□□□ -0.46
LITAF-207ENST00000571459 LAMA4Q16363 1823 aa12.18□□□□□ -0.46
LITAF-207ENST00000571459 CYP21A2P08686 494 aa12.17□□□□□ -0.46
LITAF-207ENST00000571459 FGRP09769 529 aa12.17□□□□□ -0.46
LITAF-207ENST00000571459 TSPY3P0CV98 308 aa12.17□□□□□ -0.46
LITAF-207ENST00000571459 TSPY8P0CW00 308 aa12.17□□□□□ -0.46
LITAF-207ENST00000571459 PCP11498 1178 aaKnown RBP12.17□□□□□ -0.46
LITAF-207ENST00000571459 CETPP11597 493 aa12.17□□□□□ -0.46
LITAF-207ENST00000571459 TM4SF4P48230 202 aa12.17□□□□□ -0.46
LITAF-207ENST00000571459 ATP2B2Q01814 1243 aa12.17□□□□□ -0.46
LITAF-207ENST00000571459 SREBF2Q12772 1141 aa12.17□□□□□ -0.46
LITAF-207ENST00000571459 CLEC10AQ8IUN9 316 aa12.17□□□□□ -0.46
LITAF-207ENST00000571459 JMYQ8N9B5 988 aa12.17□□□□□ -0.46
LITAF-207ENST00000571459 NEDD1Q8NHV4 660 aa12.17□□□□□ -0.46
LITAF-207ENST00000571459 ACER1Q8TDN7 264 aa12.17□□□□□ -0.46
LITAF-207ENST00000571459 STAG1Q8WVM7 1258 aa12.17□□□□□ -0.46
LITAF-207ENST00000571459 BRI3BPQ8WY22 251 aa12.17□□□□□ -0.46
LITAF-207ENST00000571459 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.17□□□□□ -0.46
LITAF-207ENST00000571459 TBC1D2Q9BYX2 928 aa12.17□□□□□ -0.46
LITAF-207ENST00000571459 RNF41Q9H4P4 317 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms