RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 DNAH12Q6ZR08 3092 aa17.57■□□□□ 0.4
CIITA-205ENST00000571186 DLL1O00548 723 aa17.56■□□□□ 0.4
CIITA-205ENST00000571186 PEX10O60683 326 aa17.56■□□□□ 0.4
CIITA-205ENST00000571186 PLCG2P16885 1265 aa17.56■□□□□ 0.4
CIITA-205ENST00000571186 BMP8BP34820 402 aa17.56■□□□□ 0.4
CIITA-205ENST00000571186 MAPKAPK5Q8IW41 473 aa17.56■□□□□ 0.4
CIITA-205ENST00000571186 CRACR2BQ8N4Y2 399 aaPredicted RBP17.56■□□□□ 0.4
CIITA-205ENST00000571186 TMEM57Q8N5G2 664 aa17.56■□□□□ 0.4
CIITA-205ENST00000571186 GPRC5AQ8NFJ5 357 aa17.56■□□□□ 0.4
CIITA-205ENST00000571186 TRIB2Q92519 343 aa17.56■□□□□ 0.4
CIITA-205ENST00000571186 GDF15Q99988 308 aa17.56■□□□□ 0.4
CIITA-205ENST00000571186 NUDT12Q9BQG2 462 aa17.56■□□□□ 0.4
CIITA-205ENST00000571186 TRIM34Q9BYJ4 488 aa17.56■□□□□ 0.4
CIITA-205ENST00000571186 C11orf49Q9H6J7 331 aa17.56■□□□□ 0.4
CIITA-205ENST00000571186 FOCADQ5VW36 1801 aa17.56■□□□□ 0.4
CIITA-205ENST00000571186 MYH1P12882 1939 aa17.55■□□□□ 0.4
CIITA-205ENST00000571186 PNMA6EA0A0J9YXQ4 647 aa17.55■□□□□ 0.4
CIITA-205ENST00000571186 C19orf81C9J6K1 198 aa17.55■□□□□ 0.4
CIITA-205ENST00000571186 SYN1P17600 705 aa17.55■□□□□ 0.4
CIITA-205ENST00000571186 HOXA7P31268 230 aaPredicted RBP17.55■□□□□ 0.4
CIITA-205ENST00000571186 JAG1P78504 1218 aa17.55■□□□□ 0.4
CIITA-205ENST00000571186 TTC39AQ5SRH9 613 aa17.55■□□□□ 0.4
CIITA-205ENST00000571186 FOXP4Q8IVH2 680 aaPredicted RBP17.55■□□□□ 0.4
CIITA-205ENST00000571186 CCAR1Q8IX12 1150 aaKnown RBP17.55■□□□□ 0.4
CIITA-205ENST00000571186 USP17L10C9JJH3 530 aa17.54■□□□□ 0.4
CIITA-205ENST00000571186 RLBP1P12271 317 aa17.54■□□□□ 0.4
CIITA-205ENST00000571186 PRKAR2AP13861 404 aaKnown RBP17.54■□□□□ 0.4
CIITA-205ENST00000571186 MNX1P50219 401 aaPredicted RBP17.54■□□□□ 0.4
CIITA-205ENST00000571186 PPP4CP60510 307 aa17.54■□□□□ 0.4
CIITA-205ENST00000571186 HERVK_113P62684 666 aa17.54■□□□□ 0.4
CIITA-205ENST00000571186 TXNRD2Q9NNW7 524 aa17.54■□□□□ 0.4
CIITA-205ENST00000571186 OGDHLQ9ULD0 1010 aa17.54■□□□□ 0.4
CIITA-205ENST00000571186 PALD1Q9ULE6 856 aa17.54■□□□□ 0.4
CIITA-205ENST00000571186 GDF11O95390 407 aa17.53■□□□□ 0.4
CIITA-205ENST00000571186 XRCC5P13010 732 aaKnown RBP17.53■□□□□ 0.4
CIITA-205ENST00000571186 PDE3AQ14432 1141 aa17.53■□□□□ 0.4
CIITA-205ENST00000571186 SHROOM1Q2M3G4 852 aaPredicted RBP17.53■□□□□ 0.4
CIITA-205ENST00000571186 CCDC158Q5M9N0 1113 aa17.53■□□□□ 0.4
CIITA-205ENST00000571186 RBPJLQ9UBG7 517 aa17.53■□□□□ 0.4
CIITA-205ENST00000571186 SAP30BPQ9UHR5 308 aaKnown RBP17.53■□□□□ 0.4
CIITA-205ENST00000571186 FLT1P17948 1338 aa17.52■□□□□ 0.4
CIITA-205ENST00000571186 MAPK4P31152 587 aa17.52■□□□□ 0.4
CIITA-205ENST00000571186 MAGEA10P43363 369 aaPredicted RBP17.52■□□□□ 0.4
CIITA-205ENST00000571186 OS9Q13438 667 aaPredicted RBP17.52■□□□□ 0.4
CIITA-205ENST00000571186 Q3C1V9 767 aa17.52■□□□□ 0.4
CIITA-205ENST00000571186 MAP3K21Q5TCX8 1036 aa17.52■□□□□ 0.4
CIITA-205ENST00000571186 SOCS4Q8WXH5 440 aa17.52■□□□□ 0.4
CIITA-205ENST00000571186 PAGR1Q9BTK6 254 aa17.52■□□□□ 0.4
CIITA-205ENST00000571186 DNAJC18Q9H819 358 aa17.52■□□□□ 0.4
CIITA-205ENST00000571186 CUL9Q8IWT3 2517 aa17.52■□□□□ 0.39
CIITA-205ENST00000571186 MAST2Q6P0Q8 1798 aa17.51■□□□□ 0.39
CIITA-205ENST00000571186 CYP2E1P05181 493 aaPredicted RBP17.51■□□□□ 0.39
CIITA-205ENST00000571186 ZKSCAN1P17029 563 aaPredicted RBP17.51■□□□□ 0.39
CIITA-205ENST00000571186 ERVK-9P63128 1117 aa17.51■□□□□ 0.39
CIITA-205ENST00000571186 ERVK-24P63145 666 aa17.51■□□□□ 0.39
CIITA-205ENST00000571186 CACNB2Q08289 660 aaPredicted RBP17.51■□□□□ 0.39
CIITA-205ENST00000571186 ADGRA1Q86SQ6 560 aa17.51■□□□□ 0.39
CIITA-205ENST00000571186 METTL16Q86W50 562 aaKnown RBP17.51■□□□□ 0.39
CIITA-205ENST00000571186 FTSJ3Q8IY81 847 aaKnown RBP17.51■□□□□ 0.39
CIITA-205ENST00000571186 TRMT44Q8IYL2 757 aaKnown RBP17.51■□□□□ 0.39
CIITA-205ENST00000571186 DEFB123Q8N688 67 aa17.51■□□□□ 0.39
CIITA-205ENST00000571186 DBNDD2Q9BQY9 259 aa17.51■□□□□ 0.39
CIITA-205ENST00000571186 CWC22Q9HCG8 908 aaKnown RBP17.51■□□□□ 0.39
CIITA-205ENST00000571186 GINM1Q9NU53 330 aa17.51■□□□□ 0.39
CIITA-205ENST00000571186 RCAN3Q9UKA8 241 aa17.51■□□□□ 0.39
CIITA-205ENST00000571186 ZBTB21Q9ULJ3 1066 aa17.51■□□□□ 0.39
CIITA-205ENST00000571186 HLA-DOAP06340 250 aa17.5■□□□□ 0.39
CIITA-205ENST00000571186 TNNI3KQ59H18 835 aa17.5■□□□□ 0.39
CIITA-205ENST00000571186 USP17L2Q6R6M4 530 aa17.5■□□□□ 0.39
CIITA-205ENST00000571186 PLEKHH3Q7Z736 793 aa17.5■□□□□ 0.39
CIITA-205ENST00000571186 PANK1Q8TE04 598 aa17.5■□□□□ 0.39
CIITA-205ENST00000571186 UBE2OQ9C0C9 1292 aaKnown RBP17.5■□□□□ 0.39
CIITA-205ENST00000571186 PORCNQ9H237 461 aa17.5■□□□□ 0.39
CIITA-205ENST00000571186 GPR108Q9NPR9 543 aa17.5■□□□□ 0.39
CIITA-205ENST00000571186 FPGT-TNNI3KV9GXZ4 949 aa17.5■□□□□ 0.39
CIITA-205ENST00000571186 LAMA2P24043 3122 aaKnown RBP17.5■□□□□ 0.39
CIITA-205ENST00000571186 PFASO15067 1338 aa17.49■□□□□ 0.39
CIITA-205ENST00000571186 RGS2P41220 211 aa17.49■□□□□ 0.39
CIITA-205ENST00000571186 ZAP70P43403 619 aa17.49■□□□□ 0.39
CIITA-205ENST00000571186 DYNLL1P63167 89 aaKnown RBP17.49■□□□□ 0.39
CIITA-205ENST00000571186 CCL14Q16627 93 aa17.49■□□□□ 0.39
CIITA-205ENST00000571186 GPR153Q6NV75 609 aa17.49■□□□□ 0.39
CIITA-205ENST00000571186 GPR142Q7Z601 462 aa17.49■□□□□ 0.39
CIITA-205ENST00000571186 ITPRIPQ8IWB1 547 aa17.49■□□□□ 0.39
CIITA-205ENST00000571186 TDHQ8IZJ6 230 aa17.49■□□□□ 0.39
CIITA-205ENST00000571186 GTF3C2Q8WUA4 911 aaPredicted RBP17.49■□□□□ 0.39
CIITA-205ENST00000571186 USP6NLQ92738 828 aa17.49■□□□□ 0.39
CIITA-205ENST00000571186 EMILIN3Q9NT22 766 aa17.49■□□□□ 0.39
CIITA-205ENST00000571186 GH2P01242 217 aa17.48■□□□□ 0.39
CIITA-205ENST00000571186 CYP7A1P22680 504 aa17.48■□□□□ 0.39
CIITA-205ENST00000571186 CCND3P30281 292 aaPredicted RBP17.48■□□□□ 0.39
CIITA-205ENST00000571186 ZYXQ15942 572 aaKnown RBP17.48■□□□□ 0.39
CIITA-205ENST00000571186 MORN1Q5T089 497 aa17.48■□□□□ 0.39
CIITA-205ENST00000571186 Q7L0L9 218 aa17.48■□□□□ 0.39
CIITA-205ENST00000571186 PIH1D3Q9NQM4 214 aaKnown RBP17.48■□□□□ 0.39
CIITA-205ENST00000571186 SURF6O75683 361 aaKnown RBP17.47■□□□□ 0.39
CIITA-205ENST00000571186 LRIT3Q3SXY7 679 aa17.47■□□□□ 0.39
CIITA-205ENST00000571186 LHX8Q68G74 356 aa17.47■□□□□ 0.39
CIITA-205ENST00000571186 FEZ1Q99689 392 aa17.47■□□□□ 0.39
CIITA-205ENST00000571186 C1orf115Q9H7X2 142 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms