RNA–Protein interactions for RNA: ENST00000571058.5

RPA1-203, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-203ENST00000571058 CAP1Q01518 475 aa20.84■□□□□ 0.93
RPA1-203ENST00000571058 DDX60LQ5H9U9 1706 aaKnown RBP20.84■□□□□ 0.93
RPA1-203ENST00000571058 PSMC4P43686 418 aa20.83■□□□□ 0.93
RPA1-203ENST00000571058 HMGCS2P54868 508 aa20.83■□□□□ 0.93
RPA1-203ENST00000571058 ATP8A2Q9NTI2 1148 aa20.83■□□□□ 0.93
RPA1-203ENST00000571058 MCM9Q9NXL9 1143 aa20.83■□□□□ 0.93
RPA1-203ENST00000571058 TMOD4Q9NZQ9 345 aa20.83■□□□□ 0.93
RPA1-203ENST00000571058 TTC41PQ6P2S7 1318 aa20.82■□□□□ 0.92
RPA1-203ENST00000571058 USP17L10C9JJH3 530 aa20.82■□□□□ 0.92
RPA1-203ENST00000571058 OSBPP22059 807 aa20.82■□□□□ 0.92
RPA1-203ENST00000571058 GCLCP48506 637 aaPredicted RBP20.82■□□□□ 0.92
RPA1-203ENST00000571058 FCGRTP55899 365 aa20.82■□□□□ 0.92
RPA1-203ENST00000571058 SLC4A8Q2Y0W8 1093 aa20.82■□□□□ 0.92
RPA1-203ENST00000571058 SLC9C1Q4G0N8 1177 aa20.82■□□□□ 0.92
RPA1-203ENST00000571058 LCORLQ8N3X6 602 aa20.82■□□□□ 0.92
RPA1-203ENST00000571058 DDRGK1Q96HY6 314 aa20.82■□□□□ 0.92
RPA1-203ENST00000571058 ARHGAP39Q9C0H5 1083 aa20.82■□□□□ 0.92
RPA1-203ENST00000571058 DCP1AQ9NPI6 582 aaPredicted RBP20.82■□□□□ 0.92
RPA1-203ENST00000571058 PTCH2Q9Y6C5 1203 aa20.82■□□□□ 0.92
RPA1-203ENST00000571058 ERC2O15083 957 aa20.81■□□□□ 0.92
RPA1-203ENST00000571058 GDF11O95390 407 aa20.81■□□□□ 0.92
RPA1-203ENST00000571058 FMNL1O95466 1100 aaPredicted RBP20.81■□□□□ 0.92
RPA1-203ENST00000571058 MTMR2Q13614 643 aa20.81■□□□□ 0.92
RPA1-203ENST00000571058 LRRFIP1Q32MZ4 808 aaKnown RBP20.81■□□□□ 0.92
RPA1-203ENST00000571058 CERKLQ49MI3 558 aaPredicted RBP20.81■□□□□ 0.92
RPA1-203ENST00000571058 TREML2Q5T2D2 321 aa20.81■□□□□ 0.92
RPA1-203ENST00000571058 AMOTL1Q8IY63 956 aa20.81■□□□□ 0.92
RPA1-203ENST00000571058 TRIM47Q96LD4 638 aa20.81■□□□□ 0.92
RPA1-203ENST00000571058 CABP5Q9NP86 173 aa20.81■□□□□ 0.92
RPA1-203ENST00000571058 ZBTB47Q9UFB7 747 aaPredicted RBP20.81■□□□□ 0.92
RPA1-203ENST00000571058 SRRDQ9UH36 339 aa20.81■□□□□ 0.92
RPA1-203ENST00000571058 MBD4O95243 580 aa20.8■□□□□ 0.92
RPA1-203ENST00000571058 GH2P01242 217 aa20.8■□□□□ 0.92
RPA1-203ENST00000571058 PLCD1P51178 756 aa20.8■□□□□ 0.92
RPA1-203ENST00000571058 FAM110CQ1W6H9 321 aa20.8■□□□□ 0.92
RPA1-203ENST00000571058 KBTBD3Q8NAB2 608 aa20.8■□□□□ 0.92
RPA1-203ENST00000571058 CRBNQ96SW2 442 aa20.8■□□□□ 0.92
RPA1-203ENST00000571058 ARMT1Q9H993 441 aa20.8■□□□□ 0.92
RPA1-203ENST00000571058 ZFYP08048 801 aaPredicted RBP20.79■□□□□ 0.92
RPA1-203ENST00000571058 HOXA7P31268 230 aaPredicted RBP20.79■□□□□ 0.92
RPA1-203ENST00000571058 JAG1P78504 1218 aa20.79■□□□□ 0.92
RPA1-203ENST00000571058 GABPAQ06546 454 aa20.79■□□□□ 0.92
RPA1-203ENST00000571058 ABCB5Q2M3G0 1257 aa20.79■□□□□ 0.92
RPA1-203ENST00000571058 SDR42E1Q8WUS8 393 aa20.79■□□□□ 0.92
RPA1-203ENST00000571058 ZNF333Q96JL9 665 aa20.79■□□□□ 0.92
RPA1-203ENST00000571058 SWAP70Q9UH65 585 aa20.79■□□□□ 0.92
RPA1-203ENST00000571058 RBBP6Q7Z6E9 1792 aaKnown RBP20.79■□□□□ 0.92
RPA1-203ENST00000571058 MGAMO43451 1857 aa20.79■□□□□ 0.92
RPA1-203ENST00000571058 ZSWIM8A7E2V4 1837 aa20.78■□□□□ 0.92
RPA1-203ENST00000571058 SHMT1P34896 483 aa20.78■□□□□ 0.92
RPA1-203ENST00000571058 USP14P54578 494 aa20.78■□□□□ 0.92
RPA1-203ENST00000571058 HDAC1Q13547 482 aaPredicted RBP20.78■□□□□ 0.92
RPA1-203ENST00000571058 USP17L2Q6R6M4 530 aa20.78■□□□□ 0.92
RPA1-203ENST00000571058 GCC1Q96CN9 775 aa20.78■□□□□ 0.92
RPA1-203ENST00000571058 ASCC2Q9H1I8 757 aaPredicted RBP20.78■□□□□ 0.92
RPA1-203ENST00000571058 GLRX3O76003 335 aaKnown RBP20.77■□□□□ 0.92
RPA1-203ENST00000571058 CTGFP29279 349 aa20.77■□□□□ 0.92
RPA1-203ENST00000571058 IRX3P78415 501 aaPredicted RBP20.77■□□□□ 0.92
RPA1-203ENST00000571058 RAET1EQ8TD07 263 aa20.77■□□□□ 0.92
RPA1-203ENST00000571058 TMEM106CQ9BVX2 250 aa20.77■□□□□ 0.92
RPA1-203ENST00000571058 KIAA0100Q14667 2235 aaKnown RBP20.77■□□□□ 0.91
RPA1-203ENST00000571058 MYPNQ86TC9 1320 aa20.77■□□□□ 0.91
RPA1-203ENST00000571058 RAB3GAP1Q15042 981 aa20.76■□□□□ 0.91
RPA1-203ENST00000571058 ANKRD13CQ8N6S4 541 aa20.76■□□□□ 0.91
RPA1-203ENST00000571058 GTF3C2Q8WUA4 911 aaPredicted RBP20.76■□□□□ 0.91
RPA1-203ENST00000571058 C12orf42Q96LP6 360 aa20.76■□□□□ 0.91
RPA1-203ENST00000571058 FEZ1Q99689 392 aa20.76■□□□□ 0.91
RPA1-203ENST00000571058 TNPO2O14787 897 aaKnown RBP20.75■□□□□ 0.91
RPA1-203ENST00000571058 SHROOM1Q2M3G4 852 aaPredicted RBP20.75■□□□□ 0.91
RPA1-203ENST00000571058 APPBP2Q92624 585 aa20.75■□□□□ 0.91
RPA1-203ENST00000571058 KIAA1683Q9H0B3 1180 aa20.75■□□□□ 0.91
RPA1-203ENST00000571058 PUS7LQ9H0K6 701 aaKnown RBP20.75■□□□□ 0.91
RPA1-203ENST00000571058 SLC4A4Q9Y6R1 1079 aa20.75■□□□□ 0.91
RPA1-203ENST00000571058 CENPFP49454 3210 aa20.75■□□□□ 0.91
RPA1-203ENST00000571058 BAZ2AQ9UIF9 1905 aaKnown RBP20.74■□□□□ 0.91
RPA1-203ENST00000571058 RNF113AO15541 343 aaKnown RBP20.74■□□□□ 0.91
RPA1-203ENST00000571058 PRKAB2O43741 272 aa20.74■□□□□ 0.91
RPA1-203ENST00000571058 MX1P20591 662 aa20.74■□□□□ 0.91
RPA1-203ENST00000571058 SLFNL1Q499Z3 407 aa20.74■□□□□ 0.91
RPA1-203ENST00000571058 C12orf60Q5U649 245 aa20.74■□□□□ 0.91
RPA1-203ENST00000571058 GIMAP6Q6P9H5 292 aa20.74■□□□□ 0.91
RPA1-203ENST00000571058 COA7Q96BR5 231 aa20.74■□□□□ 0.91
RPA1-203ENST00000571058 CCDC17Q96LX7 622 aa20.74■□□□□ 0.91
RPA1-203ENST00000571058 MYH8P13535 1937 aa20.74■□□□□ 0.91
RPA1-203ENST00000571058 GRK4P32298 578 aa20.73■□□□□ 0.91
RPA1-203ENST00000571058 TSHZ3Q63HK5 1081 aa20.73■□□□□ 0.91
RPA1-203ENST00000571058 TMEM179Q6ZVK1 233 aa20.73■□□□□ 0.91
RPA1-203ENST00000571058 SLAIN1Q8ND83 568 aa20.73■□□□□ 0.91
RPA1-203ENST00000571058 PI4K2BQ8TCG2 481 aa20.73■□□□□ 0.91
RPA1-203ENST00000571058 EMILIN3Q9NT22 766 aa20.73■□□□□ 0.91
RPA1-203ENST00000571058 ARPP21Q9UBL0 812 aaPredicted RBP20.73■□□□□ 0.91
RPA1-203ENST00000571058 MORF4L1Q9UBU8 362 aa20.73■□□□□ 0.91
RPA1-203ENST00000571058 USP17L12C9JPN9 530 aa20.72■□□□□ 0.91
RPA1-203ENST00000571058 USP17L21D6R901 530 aa20.72■□□□□ 0.91
RPA1-203ENST00000571058 ECM2O94769 699 aaPredicted RBP20.72■□□□□ 0.91
RPA1-203ENST00000571058 GNAT2P19087 354 aa20.72■□□□□ 0.91
RPA1-203ENST00000571058 HERVK_113P62684 666 aa20.72■□□□□ 0.91
RPA1-203ENST00000571058 PRKCZQ05513 592 aa20.72■□□□□ 0.91
RPA1-203ENST00000571058 IRF5Q13568 498 aa20.72■□□□□ 0.91
RPA1-203ENST00000571058 ANKRD45Q5TZF3 282 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms