RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 CFAP100Q494V2 611 aa20.2■□□□□ 0.82
RPAIN-208ENST00000571043 SBK1Q52WX2 424 aa20.2■□□□□ 0.82
RPAIN-208ENST00000571043 RRP12Q5JTH9 1297 aaKnown RBP20.2■□□□□ 0.82
RPAIN-208ENST00000571043 CTR9Q6PD62 1173 aa20.2■□□□□ 0.82
RPAIN-208ENST00000571043 SYNE3Q6ZMZ3 975 aa20.2■□□□□ 0.82
RPAIN-208ENST00000571043 CERS3Q8IU89 383 aa20.2■□□□□ 0.82
RPAIN-208ENST00000571043 TOMM22Q9NS69 142 aa20.2■□□□□ 0.82
RPAIN-208ENST00000571043 SLC12A7Q9Y666 1083 aa20.2■□□□□ 0.82
RPAIN-208ENST00000571043 SHTN1A0MZ66 631 aa20.19■□□□□ 0.82
RPAIN-208ENST00000571043 BTDP43251 543 aa20.19■□□□□ 0.82
RPAIN-208ENST00000571043 NT5C2P49902 561 aa20.19■□□□□ 0.82
RPAIN-208ENST00000571043 WTAPQ15007 396 aa20.19■□□□□ 0.82
RPAIN-208ENST00000571043 MICALL2Q8IY33 904 aa20.19■□□□□ 0.82
RPAIN-208ENST00000571043 L3MBTL3Q96JM7 780 aaPredicted RBP20.19■□□□□ 0.82
RPAIN-208ENST00000571043 NOL10Q9BSC4 688 aaKnown RBP20.19■□□□□ 0.82
RPAIN-208ENST00000571043 DCP1AQ9NPI6 582 aaPredicted RBP20.19■□□□□ 0.82
RPAIN-208ENST00000571043 ARPP21Q9UBL0 812 aaPredicted RBP20.19■□□□□ 0.82
RPAIN-208ENST00000571043 ADAMTSL1Q8N6G6 1762 aa20.18■□□□□ 0.82
RPAIN-208ENST00000571043 H7C1D1 291 aa20.18■□□□□ 0.82
RPAIN-208ENST00000571043 RBM5P52756 815 aaKnown RBP eCLIP20.18■□□□□ 0.82
RPAIN-208ENST00000571043 FAM173BQ6P4H8 233 aa20.18■□□□□ 0.82
RPAIN-208ENST00000571043 TTC6Q86TZ1 520 aa20.18■□□□□ 0.82
RPAIN-208ENST00000571043 ZBED3Q96IU2 234 aaPredicted RBP20.18■□□□□ 0.82
RPAIN-208ENST00000571043 PRMT6Q96LA8 375 aaPredicted RBP20.18■□□□□ 0.82
RPAIN-208ENST00000571043 SENP2Q9HC62 589 aa20.18■□□□□ 0.82
RPAIN-208ENST00000571043 MYOZ2Q9NPC6 264 aa20.18■□□□□ 0.82
RPAIN-208ENST00000571043 CFAP45Q9UL16 551 aa20.18■□□□□ 0.82
RPAIN-208ENST00000571043 PCDHAC2Q9Y5I4 1007 aa20.18■□□□□ 0.82
RPAIN-208ENST00000571043 GOLGA8AA7E2F4 631 aa20.17■□□□□ 0.82
RPAIN-208ENST00000571043 USP17L12C9JPN9 530 aa20.17■□□□□ 0.82
RPAIN-208ENST00000571043 USP17L21D6R901 530 aa20.17■□□□□ 0.82
RPAIN-208ENST00000571043 SLC3A2P08195 630 aaKnown RBP20.17■□□□□ 0.82
RPAIN-208ENST00000571043 DLGAP5Q15398 846 aa20.17■□□□□ 0.82
RPAIN-208ENST00000571043 LRSAM1Q6UWE0 723 aa20.17■□□□□ 0.82
RPAIN-208ENST00000571043 C8orf76Q96K31 380 aa20.17■□□□□ 0.82
RPAIN-208ENST00000571043 UBAC1Q9BSL1 405 aa20.17■□□□□ 0.82
RPAIN-208ENST00000571043 SPDYE2BA6NHP3 402 aa20.17■□□□□ 0.82
RPAIN-208ENST00000571043 ORC4O43929 436 aa20.17■□□□□ 0.82
RPAIN-208ENST00000571043 LETM1O95202 739 aaPredicted RBP20.17■□□□□ 0.82
RPAIN-208ENST00000571043 SPDYE6P0CI01 402 aa20.17■□□□□ 0.82
RPAIN-208ENST00000571043 PLCG2P16885 1265 aa20.17■□□□□ 0.82
RPAIN-208ENST00000571043 ADD1P35611 737 aaKnown RBP20.17■□□□□ 0.82
RPAIN-208ENST00000571043 EPS15P42566 896 aa20.17■□□□□ 0.82
RPAIN-208ENST00000571043 RHBDL3P58872 404 aa20.17■□□□□ 0.82
RPAIN-208ENST00000571043 CCDC183Q5T5S1 534 aa20.17■□□□□ 0.82
RPAIN-208ENST00000571043 MICU3Q86XE3 530 aa20.17■□□□□ 0.82
RPAIN-208ENST00000571043 RAB11FIP4Q86YS3 637 aa20.17■□□□□ 0.82
RPAIN-208ENST00000571043 LEO1Q8WVC0 666 aaPredicted RBP20.17■□□□□ 0.82
RPAIN-208ENST00000571043 SPATA32Q96LK8 384 aa20.17■□□□□ 0.82
RPAIN-208ENST00000571043 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.17■□□□□ 0.82
RPAIN-208ENST00000571043 CDK5RAP2Q96SN8 1893 aa20.17■□□□□ 0.82
RPAIN-208ENST00000571043 CDC27P30260 824 aa20.16■□□□□ 0.82
RPAIN-208ENST00000571043 CDC42EP5Q6NZY7 148 aa20.16■□□□□ 0.82
RPAIN-208ENST00000571043 SAMD7Q7Z3H4 446 aa20.16■□□□□ 0.82
RPAIN-208ENST00000571043 FBXO18Q8NFZ0 1043 aa20.16■□□□□ 0.82
RPAIN-208ENST00000571043 ZNF396Q96N95 335 aaPredicted RBP20.16■□□□□ 0.82
RPAIN-208ENST00000571043 FAM217BQ9NTX9 383 aaPredicted RBP20.16■□□□□ 0.82
RPAIN-208ENST00000571043 ECM29Q5VYK3 1845 aa20.16■□□□□ 0.82
RPAIN-208ENST00000571043 STK36Q9NRP7 1315 aa20.15■□□□□ 0.82
RPAIN-208ENST00000571043 SCN4AP35499 1836 aa20.15■□□□□ 0.82
RPAIN-208ENST00000571043 WNT10BO00744 389 aa20.15■□□□□ 0.82
RPAIN-208ENST00000571043 LMOD1P29536 600 aaPredicted RBP20.15■□□□□ 0.82
RPAIN-208ENST00000571043 PPP2R5BQ15173 497 aa20.15■□□□□ 0.82
RPAIN-208ENST00000571043 SEC23AQ15436 765 aa20.15■□□□□ 0.82
RPAIN-208ENST00000571043 NTRK3Q16288 839 aa20.15■□□□□ 0.82
RPAIN-208ENST00000571043 SH3RF3Q8TEJ3 882 aaPredicted RBP20.15■□□□□ 0.82
RPAIN-208ENST00000571043 USP40Q9NVE5 1235 aa20.15■□□□□ 0.82
RPAIN-208ENST00000571043 TFIP11Q9UBB9 837 aaKnown RBP20.15■□□□□ 0.82
RPAIN-208ENST00000571043 CCDC196A0A1B0GTZ2 297 aa20.14■□□□□ 0.81
RPAIN-208ENST00000571043 SYCE3A1L190 88 aa20.14■□□□□ 0.81
RPAIN-208ENST00000571043 EGFRP00533 1210 aa20.14■□□□□ 0.81
RPAIN-208ENST00000571043 ZSCAN10Q96SZ4 725 aaPredicted RBP20.14■□□□□ 0.81
RPAIN-208ENST00000571043 MKRN1Q9UHC7 482 aaKnown RBP20.14■□□□□ 0.81
RPAIN-208ENST00000571043 WDR90Q96KV7 1748 aa20.13■□□□□ 0.81
RPAIN-208ENST00000571043 CYP2D7A0A087X1C5 515 aa20.13■□□□□ 0.81
RPAIN-208ENST00000571043 IFNAR1P17181 557 aa20.13■□□□□ 0.81
RPAIN-208ENST00000571043 FOSBP53539 338 aa20.13■□□□□ 0.81
RPAIN-208ENST00000571043 NBPF9Q3BBW0 867 aa20.13■□□□□ 0.81
RPAIN-208ENST00000571043 TBC1D10BQ4KMP7 808 aaPredicted RBP20.13■□□□□ 0.81
RPAIN-208ENST00000571043 RBM26Q5T8P6 1007 aaKnown RBP20.13■□□□□ 0.81
RPAIN-208ENST00000571043 IQCA1Q86XH1 822 aa20.13■□□□□ 0.81
RPAIN-208ENST00000571043 STK11IPQ8N1F8 1099 aa20.13■□□□□ 0.81
RPAIN-208ENST00000571043 TDRD3Q9H7E2 651 aaKnown RBP20.13■□□□□ 0.81
RPAIN-208ENST00000571043 ADARB2Q9NS39 739 aaKnown RBP20.13■□□□□ 0.81
RPAIN-208ENST00000571043 POLR2AP24928 1970 aaKnown RBP20.13■□□□□ 0.81
RPAIN-208ENST00000571043 TNKSO95271 1327 aa20.13■□□□□ 0.81
RPAIN-208ENST00000571043 FOCADQ5VW36 1801 aa20.13■□□□□ 0.81
RPAIN-208ENST00000571043 POTECB2RU33 542 aa20.12■□□□□ 0.81
RPAIN-208ENST00000571043 PPFIA3O75145 1194 aa20.12■□□□□ 0.81
RPAIN-208ENST00000571043 RXRAP19793 462 aa20.12■□□□□ 0.81
RPAIN-208ENST00000571043 RTN1Q16799 776 aa20.12■□□□□ 0.81
RPAIN-208ENST00000571043 KIF4BQ2VIQ3 1234 aa20.12■□□□□ 0.81
RPAIN-208ENST00000571043 BRAPQ7Z569 592 aa20.12■□□□□ 0.81
RPAIN-208ENST00000571043 TEX11Q8IYF3 940 aa20.12■□□□□ 0.81
RPAIN-208ENST00000571043 ZKSCAN3Q9BRR0 538 aa20.12■□□□□ 0.81
RPAIN-208ENST00000571043 HACL1Q9UJ83 578 aa20.12■□□□□ 0.81
RPAIN-208ENST00000571043 RCOR1Q9UKL0 485 aa20.12■□□□□ 0.81
RPAIN-208ENST00000571043 BAZ2AQ9UIF9 1905 aaKnown RBP20.12■□□□□ 0.81
RPAIN-208ENST00000571043 WDHD1O75717 1129 aaPredicted RBP20.12■□□□□ 0.81
RPAIN-208ENST00000571043 FMNL1O95466 1100 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms