RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 USP17L10C9JJH3 530 aa10.82□□□□□ -0.68
NPLOC4-204ENST00000570324 PDE3AQ14432 1141 aa10.82□□□□□ -0.68
NPLOC4-204ENST00000570324 SH3D19Q5HYK7 790 aa10.82□□□□□ -0.68
NPLOC4-204ENST00000570324 CCAR1Q8IX12 1150 aaKnown RBP10.82□□□□□ -0.68
NPLOC4-204ENST00000570324 SLAIN1Q8ND83 568 aa10.82□□□□□ -0.68
NPLOC4-204ENST00000570324 NKX2-3Q8TAU0 364 aa10.82□□□□□ -0.68
NPLOC4-204ENST00000570324 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.82□□□□□ -0.68
NPLOC4-204ENST00000570324 FEZ1Q99689 392 aa10.82□□□□□ -0.68
NPLOC4-204ENST00000570324 ASCC2Q9H1I8 757 aaPredicted RBP10.82□□□□□ -0.68
NPLOC4-204ENST00000570324 SERPINB13Q9UIV8 391 aa10.82□□□□□ -0.68
NPLOC4-204ENST00000570324 MGAMO43451 1857 aa10.82□□□□□ -0.68
NPLOC4-204ENST00000570324 CDK5RAP2Q96SN8 1893 aa10.82□□□□□ -0.68
NPLOC4-204ENST00000570324 FOCADQ5VW36 1801 aa10.81□□□□□ -0.68
NPLOC4-204ENST00000570324 ADCY3O60266 1144 aa10.81□□□□□ -0.68
NPLOC4-204ENST00000570324 GH2P01242 217 aa10.81□□□□□ -0.68
NPLOC4-204ENST00000570324 CCL5P13501 91 aa10.81□□□□□ -0.68
NPLOC4-204ENST00000570324 PDE6AP16499 860 aa10.81□□□□□ -0.68
NPLOC4-204ENST00000570324 FLT3LGP49771 235 aa10.81□□□□□ -0.68
NPLOC4-204ENST00000570324 RAB3GAP1Q15042 981 aa10.81□□□□□ -0.68
NPLOC4-204ENST00000570324 MTFR1Q15390 333 aa10.81□□□□□ -0.68
NPLOC4-204ENST00000570324 FAM110CQ1W6H9 321 aa10.81□□□□□ -0.68
NPLOC4-204ENST00000570324 CERKLQ49MI3 558 aaPredicted RBP10.81□□□□□ -0.68
NPLOC4-204ENST00000570324 SIRT2Q8IXJ6 389 aa10.81□□□□□ -0.68
NPLOC4-204ENST00000570324 LRRCC1Q9C099 1032 aa10.81□□□□□ -0.68
NPLOC4-204ENST00000570324 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.81□□□□□ -0.683e-9■■■□□ 15.1
NPLOC4-204ENST00000570324 RNF208Q9H0X6 261 aa10.81□□□□□ -0.68
NPLOC4-204ENST00000570324 BOLA2Q9H3K6 86 aa10.81□□□□□ -0.68
NPLOC4-204ENST00000570324 DNAJC18Q9H819 358 aa10.81□□□□□ -0.68
NPLOC4-204ENST00000570324 CWC22Q9HCG8 908 aaKnown RBP10.81□□□□□ -0.68
NPLOC4-204ENST00000570324 PAG1Q9NWQ8 432 aa10.81□□□□□ -0.68
NPLOC4-204ENST00000570324 GABRQQ9UN88 632 aa10.81□□□□□ -0.68
NPLOC4-204ENST00000570324 ZNF532Q9HCE3 1301 aa10.81□□□□□ -0.68
NPLOC4-204ENST00000570324 MPHOSPH10O00566 681 aaKnown RBP10.8□□□□□ -0.68
NPLOC4-204ENST00000570324 ABCB5Q2M3G0 1257 aa10.8□□□□□ -0.68
NPLOC4-204ENST00000570324 USP17L2Q6R6M4 530 aa10.8□□□□□ -0.68
NPLOC4-204ENST00000570324 METTL16Q86W50 562 aaKnown RBP10.8□□□□□ -0.68
NPLOC4-204ENST00000570324 AMOTL1Q8IY63 956 aa10.8□□□□□ -0.68
NPLOC4-204ENST00000570324 GCC1Q96CN9 775 aa10.8□□□□□ -0.68
NPLOC4-204ENST00000570324 DDRGK1Q96HY6 314 aa10.8□□□□□ -0.68
NPLOC4-204ENST00000570324 EHD4Q9H223 541 aa10.8□□□□□ -0.68
NPLOC4-204ENST00000570324 MCM9Q9NXL9 1143 aa10.8□□□□□ -0.68
NPLOC4-204ENST00000570324 PDE4DIPQ5VU43 2346 aa10.8□□□□□ -0.68
NPLOC4-204ENST00000570324 SIPA1L1O43166 1804 aa10.79□□□□□ -0.68
NPLOC4-204ENST00000570324 GJB1P08034 283 aa10.79□□□□□ -0.68
NPLOC4-204ENST00000570324 ELNP15502 786 aa10.79□□□□□ -0.68
NPLOC4-204ENST00000570324 ATP5JP18859 108 aa10.79□□□□□ -0.68
NPLOC4-204ENST00000570324 HOXA7P31268 230 aaPredicted RBP10.79□□□□□ -0.68
NPLOC4-204ENST00000570324 USP14P54578 494 aa10.79□□□□□ -0.68
NPLOC4-204ENST00000570324 JAG1P78504 1218 aa10.79□□□□□ -0.68
NPLOC4-204ENST00000570324 ZYXQ15942 572 aaKnown RBP10.79□□□□□ -0.68
NPLOC4-204ENST00000570324 C20orf194Q5TEA3 1177 aa10.79□□□□□ -0.68
NPLOC4-204ENST00000570324 ZSCAN25Q6NSZ9 544 aa10.79□□□□□ -0.68
NPLOC4-204ENST00000570324 TATDN1Q6P1N9 297 aa10.79□□□□□ -0.68
NPLOC4-204ENST00000570324 PXYLP1Q8TE99 480 aa10.79□□□□□ -0.68
NPLOC4-204ENST00000570324 GPATCH3Q96I76 525 aa10.79□□□□□ -0.68
NPLOC4-204ENST00000570324 P2RX7Q99572 595 aaKnown RBP10.79□□□□□ -0.68
NPLOC4-204ENST00000570324 RIOK1Q9BRS2 568 aaKnown RBP10.79□□□□□ -0.68
NPLOC4-204ENST00000570324 LOC285556D6RIA3 1793 aa10.79□□□□□ -0.68
NPLOC4-204ENST00000570324 KIAA0100Q14667 2235 aaKnown RBP10.78□□□□□ -0.68
NPLOC4-204ENST00000570324 PLCD1P51178 756 aa10.78□□□□□ -0.68
NPLOC4-204ENST00000570324 HERVK_113P62684 666 aa10.78□□□□□ -0.68
NPLOC4-204ENST00000570324 IRF5Q13568 498 aa10.78□□□□□ -0.68
NPLOC4-204ENST00000570324 SHROOM1Q2M3G4 852 aaPredicted RBP10.78□□□□□ -0.68
NPLOC4-204ENST00000570324 LCORLQ8N3X6 602 aa10.78□□□□□ -0.68
NPLOC4-204ENST00000570324 GPRC5AQ8NFJ5 357 aa10.78□□□□□ -0.68
NPLOC4-204ENST00000570324 GTF3C2Q8WUA4 911 aaPredicted RBP10.78□□□□□ -0.68
NPLOC4-204ENST00000570324 SDR42E1Q8WUS8 393 aa10.78□□□□□ -0.68
NPLOC4-204ENST00000570324 EDC3Q96F86 508 aaKnown RBP10.78□□□□□ -0.68
NPLOC4-204ENST00000570324 PAGR1Q9BTK6 254 aa10.78□□□□□ -0.68
NPLOC4-204ENST00000570324 ARMT1Q9H993 441 aa10.78□□□□□ -0.68
NPLOC4-204ENST00000570324 USP17L15C9J2P7 530 aa10.77□□□□□ -0.69
NPLOC4-204ENST00000570324 USP17L13C9JLJ4 530 aa10.77□□□□□ -0.69
NPLOC4-204ENST00000570324 USP17L11C9JVI0 530 aa10.77□□□□□ -0.69
NPLOC4-204ENST00000570324 USP17L18D6R9N7 530 aa10.77□□□□□ -0.69
NPLOC4-204ENST00000570324 USP17L22D6RA61 530 aa10.77□□□□□ -0.69
NPLOC4-204ENST00000570324 USP17L17D6RBQ6 530 aa10.77□□□□□ -0.69
NPLOC4-204ENST00000570324 USP17L19D6RCP7 530 aa10.77□□□□□ -0.69
NPLOC4-204ENST00000570324 USP17L20D6RJB6 530 aa10.77□□□□□ -0.69
NPLOC4-204ENST00000570324 SMARCA5O60264 1052 aaPredicted RBP10.77□□□□□ -0.69
NPLOC4-204ENST00000570324 MBD4O95243 580 aa10.77□□□□□ -0.69
NPLOC4-204ENST00000570324 TFRCP02786 760 aaKnown RBP10.77□□□□□ -0.69
NPLOC4-204ENST00000570324 INHAP05111 366 aa10.77□□□□□ -0.69
NPLOC4-204ENST00000570324 ADD2P35612 726 aa10.77□□□□□ -0.69
NPLOC4-204ENST00000570324 GJA8P48165 433 aa10.77□□□□□ -0.69
NPLOC4-204ENST00000570324 USP17L24Q0WX57 530 aa10.77□□□□□ -0.69
NPLOC4-204ENST00000570324 U2AF1L4Q8WU68 220 aaKnown RBP10.77□□□□□ -0.69
NPLOC4-204ENST00000570324 DPF3Q92784 378 aa10.77□□□□□ -0.69
NPLOC4-204ENST00000570324 HAUS7Q99871 368 aa10.77□□□□□ -0.69
NPLOC4-204ENST00000570324 HTATIP2Q9BUP3 242 aa10.77□□□□□ -0.69
NPLOC4-204ENST00000570324 UNC93B1Q9H1C4 597 aa10.77□□□□□ -0.69
NPLOC4-204ENST00000570324 EMILIN3Q9NT22 766 aa10.77□□□□□ -0.69
NPLOC4-204ENST00000570324 MORF4L1Q9UBU8 362 aa10.77□□□□□ -0.69
NPLOC4-204ENST00000570324 NAV1Q8NEY1 1877 aa10.76□□□□□ -0.69
NPLOC4-204ENST00000570324 TCRBV5S4A2TA0A5A2 114 aa10.76□□□□□ -0.69
NPLOC4-204ENST00000570324 SGPL1O95470 568 aa10.76□□□□□ -0.69
NPLOC4-204ENST00000570324 CAPN2P17655 700 aa10.76□□□□□ -0.69
NPLOC4-204ENST00000570324 MAPK4P31152 587 aa10.76□□□□□ -0.69
NPLOC4-204ENST00000570324 SHMT1P34896 483 aa10.76□□□□□ -0.69
NPLOC4-204ENST00000570324 CCNA1P78396 465 aa10.76□□□□□ -0.69
NPLOC4-204ENST00000570324 DEFB118Q96PH6 123 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 283.7 ms