RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 ANKRD23Q86SG2 305 aa16.61■□□□□ 0.25
HERPUD1-218ENST00000569569 EVI5LQ96CN4 794 aa16.61■□□□□ 0.25
HERPUD1-218ENST00000569569 STRBPQ96SI9 672 aaKnown RBP16.61■□□□□ 0.25
HERPUD1-218ENST00000569569 AS3MTQ9HBK9 375 aa16.61■□□□□ 0.25
HERPUD1-218ENST00000569569 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.61■□□□□ 0.25
HERPUD1-218ENST00000569569 GABPAQ06546 454 aa16.6■□□□□ 0.25
HERPUD1-218ENST00000569569 MOGSQ13724 837 aa16.6■□□□□ 0.25
HERPUD1-218ENST00000569569 CCDC84Q86UT8 332 aaPredicted RBP16.6■□□□□ 0.25
HERPUD1-218ENST00000569569 PLEKHM2Q8IWE5 1019 aa16.6■□□□□ 0.25
HERPUD1-218ENST00000569569 AMOTL1Q8IY63 956 aa16.6■□□□□ 0.25
HERPUD1-218ENST00000569569 ZNF280CQ8ND82 737 aa16.6■□□□□ 0.25
HERPUD1-218ENST00000569569 TAOK2Q9UL54 1235 aa16.6■□□□□ 0.25
HERPUD1-218ENST00000569569 TRIM75PA6NK02 468 aa16.59■□□□□ 0.25
HERPUD1-218ENST00000569569 PDHXO00330 501 aa16.59■□□□□ 0.25
HERPUD1-218ENST00000569569 GDF11O95390 407 aa16.59■□□□□ 0.25
HERPUD1-218ENST00000569569 SPP2Q13103 211 aa16.59■□□□□ 0.25
HERPUD1-218ENST00000569569 CERKLQ49MI3 558 aaPredicted RBP16.59■□□□□ 0.25
HERPUD1-218ENST00000569569 WDR18Q9BV38 432 aa16.59■□□□□ 0.25
HERPUD1-218ENST00000569569 OSBPL3Q9H4L5 887 aa16.59■□□□□ 0.25
HERPUD1-218ENST00000569569 USP17L12C9JPN9 530 aa16.58■□□□□ 0.24
HERPUD1-218ENST00000569569 USP17L21D6R901 530 aa16.58■□□□□ 0.24
HERPUD1-218ENST00000569569 GPAA1O43292 621 aa16.58■□□□□ 0.24
HERPUD1-218ENST00000569569 TLR2O60603 784 aa16.58■□□□□ 0.24
HERPUD1-218ENST00000569569 GNAT2P19087 354 aa16.58■□□□□ 0.24
HERPUD1-218ENST00000569569 SHMT1P34896 483 aa16.58■□□□□ 0.24
HERPUD1-218ENST00000569569 JAG1P78504 1218 aa16.58■□□□□ 0.24
HERPUD1-218ENST00000569569 DGKZQ13574 1117 aa16.58■□□□□ 0.24
HERPUD1-218ENST00000569569 ZMYM1Q5SVZ6 1142 aa16.58■□□□□ 0.24
HERPUD1-218ENST00000569569 C12orf60Q5U649 245 aa16.58■□□□□ 0.24
HERPUD1-218ENST00000569569 GPAT2Q6NUI2 795 aa16.58■□□□□ 0.24
HERPUD1-218ENST00000569569 GIMAP6Q6P9H5 292 aa16.58■□□□□ 0.24
HERPUD1-218ENST00000569569 GADL1Q6ZQY3 521 aa16.58■□□□□ 0.24
HERPUD1-218ENST00000569569 CTU1Q7Z7A3 348 aaKnown RBP16.58■□□□□ 0.24
HERPUD1-218ENST00000569569 TICAM2Q86XR7 235 aa16.58■□□□□ 0.24
HERPUD1-218ENST00000569569 ZBTB21Q9ULJ3 1066 aa16.58■□□□□ 0.24
HERPUD1-218ENST00000569569 LOC285556D6RIA3 1793 aa16.57■□□□□ 0.24
HERPUD1-218ENST00000569569 GSG1L2A8MUP6 293 aa16.57■□□□□ 0.24
HERPUD1-218ENST00000569569 M0R2C6 588 aa16.57■□□□□ 0.24
HERPUD1-218ENST00000569569 GH2P01242 217 aa16.57■□□□□ 0.24
HERPUD1-218ENST00000569569 CYP2D6P10635 497 aa16.57■□□□□ 0.24
HERPUD1-218ENST00000569569 SP3Q02447 781 aa16.57■□□□□ 0.24
HERPUD1-218ENST00000569569 IFFO2Q5TF58 517 aa16.57■□□□□ 0.24
HERPUD1-218ENST00000569569 PROCA1Q8NCQ7 364 aaPredicted RBP16.57■□□□□ 0.24
HERPUD1-218ENST00000569569 MCOLN1Q9GZU1 580 aa16.57■□□□□ 0.24
HERPUD1-218ENST00000569569 CABP5Q9NP86 173 aa16.57■□□□□ 0.24
HERPUD1-218ENST00000569569 SWAP70Q9UH65 585 aa16.57■□□□□ 0.24
HERPUD1-218ENST00000569569 SLC45A1Q9Y2W3 748 aa16.57■□□□□ 0.24
HERPUD1-218ENST00000569569 TRIM6-TRIM34B2RNG4 842 aa16.56■□□□□ 0.24
HERPUD1-218ENST00000569569 PATL2C9JE40 543 aaKnown RBP16.56■□□□□ 0.24
HERPUD1-218ENST00000569569 BACE1P56817 501 aa16.56■□□□□ 0.24
HERPUD1-218ENST00000569569 EVX2Q03828 476 aa16.56■□□□□ 0.24
HERPUD1-218ENST00000569569 ABCB5Q2M3G0 1257 aa16.56■□□□□ 0.24
HERPUD1-218ENST00000569569 SHROOM1Q2M3G4 852 aaPredicted RBP16.56■□□□□ 0.24
HERPUD1-218ENST00000569569 SH3D19Q5HYK7 790 aa16.56■□□□□ 0.24
HERPUD1-218ENST00000569569 CTR9Q6PD62 1173 aa16.56■□□□□ 0.24
HERPUD1-218ENST00000569569 ERO1AQ96HE7 468 aa16.56■□□□□ 0.24
HERPUD1-218ENST00000569569 SEC62Q99442 399 aaKnown RBP16.56■□□□□ 0.24
HERPUD1-218ENST00000569569 ARPP21Q9UBL0 812 aaPredicted RBP16.56■□□□□ 0.24
HERPUD1-218ENST00000569569 C19orf81C9J6K1 198 aa16.55■□□□□ 0.24
HERPUD1-218ENST00000569569 USP17L10C9JJH3 530 aa16.55■□□□□ 0.24
HERPUD1-218ENST00000569569 APPP05067 770 aa16.55■□□□□ 0.24
HERPUD1-218ENST00000569569 HMGCS2P54868 508 aa16.55■□□□□ 0.24
HERPUD1-218ENST00000569569 PKN2Q16513 984 aaKnown RBP16.55■□□□□ 0.24
HERPUD1-218ENST00000569569 SBK1Q52WX2 424 aa16.55■□□□□ 0.24
HERPUD1-218ENST00000569569 RILPL2Q969X0 211 aa16.55■□□□□ 0.24
HERPUD1-218ENST00000569569 DYNLL2Q96FJ2 89 aa16.55■□□□□ 0.24
HERPUD1-218ENST00000569569 PARK7Q99497 189 aaKnown RBP16.55■□□□□ 0.24
HERPUD1-218ENST00000569569 AGTPBP1Q9UPW5 1226 aa16.55■□□□□ 0.24
HERPUD1-218ENST00000569569 CYP2D7A0A087X1C5 515 aa16.54■□□□□ 0.24
HERPUD1-218ENST00000569569 RAB3GAP1Q15042 981 aa16.54■□□□□ 0.24
HERPUD1-218ENST00000569569 C17orf99Q6UX52 265 aa16.54■□□□□ 0.24
HERPUD1-218ENST00000569569 C16orf86Q6ZW13 317 aa16.54■□□□□ 0.24
HERPUD1-218ENST00000569569 IFNL3Q8IZI9 196 aa16.54■□□□□ 0.24
HERPUD1-218ENST00000569569 ABHD8Q96I13 439 aa16.54■□□□□ 0.24
HERPUD1-218ENST00000569569 HELLSQ9NRZ9 838 aa16.54■□□□□ 0.24
HERPUD1-218ENST00000569569 MGAMO43451 1857 aa16.54■□□□□ 0.24
HERPUD1-218ENST00000569569 CDK8P49336 464 aa16.53■□□□□ 0.24
HERPUD1-218ENST00000569569 PABPC4Q13310 644 aaKnown RBP eCLIP16.53■□□□□ 0.24
HERPUD1-218ENST00000569569 MTMR2Q13614 643 aa16.53■□□□□ 0.24
HERPUD1-218ENST00000569569 TREML2Q5T2D2 321 aa16.53■□□□□ 0.24
HERPUD1-218ENST00000569569 SLC44A5Q8NCS7 719 aa16.53■□□□□ 0.24
HERPUD1-218ENST00000569569 CD99L2Q8TCZ2 262 aa16.53■□□□□ 0.24
HERPUD1-218ENST00000569569 CCDC17Q96LX7 622 aa16.53■□□□□ 0.24
HERPUD1-218ENST00000569569 NACAP1Q9BZK3 213 aa16.53■□□□□ 0.24
HERPUD1-218ENST00000569569 TMOD4Q9NZQ9 345 aa16.53■□□□□ 0.24
HERPUD1-218ENST00000569569 PNMA3Q9UL41 463 aa16.53■□□□□ 0.24
HERPUD1-218ENST00000569569 DOCK3Q8IZD9 2030 aa16.52■□□□□ 0.24
HERPUD1-218ENST00000569569 MINDY4BA8MYZ0 360 aa16.52■□□□□ 0.24
HERPUD1-218ENST00000569569 SMIM22K7EJ46 135 aa16.52■□□□□ 0.24
HERPUD1-218ENST00000569569 MPHOSPH10O00566 681 aaKnown RBP16.52■□□□□ 0.24
HERPUD1-218ENST00000569569 CYP2C8P10632 490 aa16.52■□□□□ 0.24
HERPUD1-218ENST00000569569 TDO2P48775 406 aa16.52■□□□□ 0.24
HERPUD1-218ENST00000569569 ARHGEF6Q15052 776 aa16.52■□□□□ 0.24
HERPUD1-218ENST00000569569 EPB41L4AQ9HCS5 686 aaPredicted RBP16.52■□□□□ 0.24
HERPUD1-218ENST00000569569 CPA4Q9UI42 421 aa16.52■□□□□ 0.24
HERPUD1-218ENST00000569569 ADGRA2Q96PE1 1338 aa16.51■□□□□ 0.23
HERPUD1-218ENST00000569569 PDE4AP27815 886 aa16.51■□□□□ 0.23
HERPUD1-218ENST00000569569 GUCY1A2P33402 732 aa16.51■□□□□ 0.23
HERPUD1-218ENST00000569569 KIF22Q14807 665 aa16.51■□□□□ 0.23
HERPUD1-218ENST00000569569 SEPT2Q15019 361 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms