RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 HMGCS2P54868 508 aa17.4■□□□□ 0.38
COMMD4-225ENST00000569245 KBTBD3Q8NAB2 608 aa17.4■□□□□ 0.38
COMMD4-225ENST00000569245 DCP1AQ9NPI6 582 aaPredicted RBP17.4■□□□□ 0.38
COMMD4-225ENST00000569245 GINM1Q9NU53 330 aa17.4■□□□□ 0.38
COMMD4-225ENST00000569245 LAMB1P07942 1786 aa17.4■□□□□ 0.38
COMMD4-225ENST00000569245 GLRX3O76003 335 aaKnown RBP17.39■□□□□ 0.37
COMMD4-225ENST00000569245 GH2P01242 217 aa17.39■□□□□ 0.37
COMMD4-225ENST00000569245 PDE4AP27815 886 aa17.39■□□□□ 0.37
COMMD4-225ENST00000569245 JAG1P78504 1218 aa17.39■□□□□ 0.37
COMMD4-225ENST00000569245 SHROOM1Q2M3G4 852 aaPredicted RBP17.39■□□□□ 0.37
COMMD4-225ENST00000569245 LRRFIP1Q32MZ4 808 aaKnown RBP17.39■□□□□ 0.37
COMMD4-225ENST00000569245 CERKLQ49MI3 558 aaPredicted RBP17.39■□□□□ 0.37
COMMD4-225ENST00000569245 TATDN1Q6P1N9 297 aa17.39■□□□□ 0.37
COMMD4-225ENST00000569245 C17orf99Q6UX52 265 aa17.39■□□□□ 0.37
COMMD4-225ENST00000569245 AMOTL1Q8IY63 956 aa17.39■□□□□ 0.37
COMMD4-225ENST00000569245 SMCR8Q8TEV9 937 aaPredicted RBP17.39■□□□□ 0.37
COMMD4-225ENST00000569245 WDR18Q9BV38 432 aa17.39■□□□□ 0.37
COMMD4-225ENST00000569245 ATP8A2Q9NTI2 1148 aa17.39■□□□□ 0.37
COMMD4-225ENST00000569245 TMOD4Q9NZQ9 345 aa17.39■□□□□ 0.37
COMMD4-225ENST00000569245 ZBTB21Q9ULJ3 1066 aa17.39■□□□□ 0.37
COMMD4-225ENST00000569245 AGTPBP1Q9UPW5 1226 aa17.39■□□□□ 0.37
COMMD4-225ENST00000569245 SLC4A4Q9Y6R1 1079 aa17.39■□□□□ 0.37
COMMD4-225ENST00000569245 RNF113AO15541 343 aaKnown RBP17.38■□□□□ 0.37
COMMD4-225ENST00000569245 LACTBP83111 547 aaPredicted RBP17.38■□□□□ 0.37
COMMD4-225ENST00000569245 MTMR2Q13614 643 aa17.38■□□□□ 0.37
COMMD4-225ENST00000569245 RAB3GAP1Q15042 981 aa17.38■□□□□ 0.37
COMMD4-225ENST00000569245 ABCB5Q2M3G0 1257 aa17.38■□□□□ 0.37
COMMD4-225ENST00000569245 TREML2Q5T2D2 321 aa17.38■□□□□ 0.37
COMMD4-225ENST00000569245 SKAP1Q86WV1 359 aa17.38■□□□□ 0.37
COMMD4-225ENST00000569245 PROCA1Q8NCQ7 364 aaPredicted RBP17.38■□□□□ 0.37
COMMD4-225ENST00000569245 PUS7LQ9H0K6 701 aaKnown RBP17.38■□□□□ 0.37
COMMD4-225ENST00000569245 CABP5Q9NP86 173 aa17.38■□□□□ 0.37
COMMD4-225ENST00000569245 PTPN22Q9Y2R2 807 aa17.38■□□□□ 0.37
COMMD4-225ENST00000569245 SLC45A1Q9Y2W3 748 aa17.38■□□□□ 0.37
COMMD4-225ENST00000569245 ZFYP08048 801 aaPredicted RBP17.37■□□□□ 0.37
COMMD4-225ENST00000569245 CYP2D6P10635 497 aa17.37■□□□□ 0.37
COMMD4-225ENST00000569245 BACE1P56817 501 aa17.37■□□□□ 0.37
COMMD4-225ENST00000569245 PABPC4Q13310 644 aaKnown RBP eCLIP17.37■□□□□ 0.371e-6■■□□□ 13.1
COMMD4-225ENST00000569245 PI4K2BQ8TCG2 481 aa17.37■□□□□ 0.37
COMMD4-225ENST00000569245 FSD1Q9BTV5 496 aa17.37■□□□□ 0.37
COMMD4-225ENST00000569245 ARHGAP39Q9C0H5 1083 aa17.37■□□□□ 0.37
COMMD4-225ENST00000569245 PNMA3Q9UL41 463 aa17.37■□□□□ 0.37
COMMD4-225ENST00000569245 DOCK1Q14185 1865 aa17.37■□□□□ 0.37
COMMD4-225ENST00000569245 USP17L10C9JJH3 530 aa17.36■□□□□ 0.37
COMMD4-225ENST00000569245 MPHOSPH10O00566 681 aaKnown RBP17.36■□□□□ 0.37
COMMD4-225ENST00000569245 FMNL1O95466 1100 aaPredicted RBP17.36■□□□□ 0.37
COMMD4-225ENST00000569245 OSBPP22059 807 aa17.36■□□□□ 0.37
COMMD4-225ENST00000569245 SHMT1P34896 483 aa17.36■□□□□ 0.37
COMMD4-225ENST00000569245 PSMC4P43686 418 aa17.36■□□□□ 0.37
COMMD4-225ENST00000569245 CAP1Q01518 475 aa17.36■□□□□ 0.37
COMMD4-225ENST00000569245 C19orf81C9J6K1 198 aa17.35■□□□□ 0.37
COMMD4-225ENST00000569245 SOX10P56693 466 aa17.35■□□□□ 0.37
COMMD4-225ENST00000569245 EVX2Q03828 476 aa17.35■□□□□ 0.37
COMMD4-225ENST00000569245 SH3D19Q5HYK7 790 aa17.35■□□□□ 0.37
COMMD4-225ENST00000569245 APPBP2Q92624 585 aa17.35■□□□□ 0.37
COMMD4-225ENST00000569245 STRBPQ96SI9 672 aaKnown RBP17.35■□□□□ 0.37
COMMD4-225ENST00000569245 FEZ1Q99689 392 aa17.35■□□□□ 0.37
COMMD4-225ENST00000569245 SALL3Q9BXA9 1300 aa17.35■□□□□ 0.37
COMMD4-225ENST00000569245 CYP2D7A0A087X1C5 515 aa17.34■□□□□ 0.37
COMMD4-225ENST00000569245 USP17L12C9JPN9 530 aa17.34■□□□□ 0.37
COMMD4-225ENST00000569245 USP17L21D6R901 530 aa17.34■□□□□ 0.37
COMMD4-225ENST00000569245 GNRH1P01148 92 aa17.34■□□□□ 0.37
COMMD4-225ENST00000569245 APPP05067 770 aa17.34■□□□□ 0.37
COMMD4-225ENST00000569245 GABPAQ06546 454 aa17.34■□□□□ 0.37
COMMD4-225ENST00000569245 PLEKHM2Q8IWE5 1019 aa17.34■□□□□ 0.37
COMMD4-225ENST00000569245 OSBP2Q969R2 916 aa17.34■□□□□ 0.37
COMMD4-225ENST00000569245 DYNLL2Q96FJ2 89 aa17.34■□□□□ 0.37
COMMD4-225ENST00000569245 ADGRA2Q96PE1 1338 aa17.34■□□□□ 0.37
COMMD4-225ENST00000569245 SWAP70Q9UH65 585 aa17.34■□□□□ 0.37
COMMD4-225ENST00000569245 CDK5RAP2Q96SN8 1893 aa17.33■□□□□ 0.37
COMMD4-225ENST00000569245 FOCADQ5VW36 1801 aa17.33■□□□□ 0.37
COMMD4-225ENST00000569245 BCRP11274 1271 aa17.33■□□□□ 0.36
COMMD4-225ENST00000569245 HOXD10P28358 340 aa17.33■□□□□ 0.36
COMMD4-225ENST00000569245 IRX3P78415 501 aaPredicted RBP17.33■□□□□ 0.36
COMMD4-225ENST00000569245 ZYXQ15942 572 aaKnown RBP17.33■□□□□ 0.36
COMMD4-225ENST00000569245 C12orf60Q5U649 245 aa17.33■□□□□ 0.36
COMMD4-225ENST00000569245 USP17L2Q6R6M4 530 aa17.33■□□□□ 0.36
COMMD4-225ENST00000569245 ANKRD13CQ8N6S4 541 aa17.33■□□□□ 0.36
COMMD4-225ENST00000569245 SLC44A5Q8NCS7 719 aa17.33■□□□□ 0.36
COMMD4-225ENST00000569245 TRIM47Q96LD4 638 aa17.33■□□□□ 0.36
COMMD4-225ENST00000569245 ASCC2Q9H1I8 757 aaPredicted RBP17.33■□□□□ 0.36
COMMD4-225ENST00000569245 OSBPL3Q9H4L5 887 aa17.33■□□□□ 0.36
COMMD4-225ENST00000569245 SIPA1L1O43166 1804 aa17.33■□□□□ 0.36
COMMD4-225ENST00000569245 GPAA1O43292 621 aa17.32■□□□□ 0.36
COMMD4-225ENST00000569245 PDE1AP54750 535 aa17.32■□□□□ 0.36
COMMD4-225ENST00000569245 FCGRTP55899 365 aa17.32■□□□□ 0.36
COMMD4-225ENST00000569245 SLC9C1Q4G0N8 1177 aa17.32■□□□□ 0.36
COMMD4-225ENST00000569245 CTR9Q6PD62 1173 aa17.32■□□□□ 0.36
COMMD4-225ENST00000569245 STAP2Q9UGK3 403 aa17.32■□□□□ 0.36
COMMD4-225ENST00000569245 PTCH2Q9Y6C5 1203 aa17.32■□□□□ 0.36
COMMD4-225ENST00000569245 MYH1P12882 1939 aa17.31■□□□□ 0.36
COMMD4-225ENST00000569245 HTTP42858 3142 aa17.31■□□□□ 0.36
COMMD4-225ENST00000569245 M0R2C6 588 aa17.31■□□□□ 0.36
COMMD4-225ENST00000569245 GNAT2P19087 354 aa17.31■□□□□ 0.36
COMMD4-225ENST00000569245 GCLCP48506 637 aaPredicted RBP17.31■□□□□ 0.36
COMMD4-225ENST00000569245 USP14P54578 494 aa17.31■□□□□ 0.36
COMMD4-225ENST00000569245 SEPT2Q15019 361 aa17.31■□□□□ 0.36
COMMD4-225ENST00000569245 NBPF11Q86T75 865 aa17.31■□□□□ 0.36
COMMD4-225ENST00000569245 EMILIN3Q9NT22 766 aa17.31■□□□□ 0.36
COMMD4-225ENST00000569245 ARPP21Q9UBL0 812 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms