RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 INTS6LQ5JSJ4 861 aaKnown RBP7.62□□□□□ -1.19
CDH13-212ENST00000569144 TTLL5Q6EMB2 1281 aa7.62□□□□□ -1.19
CDH13-212ENST00000569144 CCDC116Q8IYX3 515 aa7.62□□□□□ -1.19
CDH13-212ENST00000569144 CRIPAKQ8N1N5 446 aa7.62□□□□□ -1.19
CDH13-212ENST00000569144 BRI3BPQ8WY22 251 aa7.62□□□□□ -1.19
CDH13-212ENST00000569144 OPTNQ96CV9 577 aa7.62□□□□□ -1.19
CDH13-212ENST00000569144 CDC5LQ99459 802 aaKnown RBP7.62□□□□□ -1.19
CDH13-212ENST00000569144 COL25A1Q9BXS0 654 aaPredicted RBP7.62□□□□□ -1.19
CDH13-212ENST00000569144 PNNQ9H307 717 aaKnown RBP7.62□□□□□ -1.19
CDH13-212ENST00000569144 STXBP5LQ9Y2K9 1186 aa7.62□□□□□ -1.19
CDH13-212ENST00000569144 CCL15-CCL14A0A0B4J2E2 113 aa7.61□□□□□ -1.19
CDH13-212ENST00000569144 CAPN5O15484 640 aaPredicted RBP7.61□□□□□ -1.19
CDH13-212ENST00000569144 MYO1BO43795 1136 aa7.61□□□□□ -1.19
CDH13-212ENST00000569144 TLR2O60603 784 aa7.61□□□□□ -1.19
CDH13-212ENST00000569144 WDHD1O75717 1129 aaPredicted RBP7.61□□□□□ -1.19
CDH13-212ENST00000569144 PCCAP05165 728 aaPredicted RBP7.61□□□□□ -1.19
CDH13-212ENST00000569144 GJB1P08034 283 aa7.61□□□□□ -1.19
CDH13-212ENST00000569144 HOXB7P09629 217 aa7.61□□□□□ -1.19
CDH13-212ENST00000569144 TIMP2P16035 220 aa7.61□□□□□ -1.19
CDH13-212ENST00000569144 GTF2A2P52657 109 aa7.61□□□□□ -1.19
CDH13-212ENST00000569144 CCL15Q16663 113 aa7.61□□□□□ -1.19
CDH13-212ENST00000569144 NBPF12Q5TAG4 269 aaPredicted RBP7.61□□□□□ -1.19
CDH13-212ENST00000569144 HDGFL1Q5TGJ6 251 aa7.61□□□□□ -1.19
CDH13-212ENST00000569144 FAM43AQ8N2R8 423 aa7.61□□□□□ -1.19
CDH13-212ENST00000569144 ZNF592Q92610 1267 aa7.61□□□□□ -1.19
CDH13-212ENST00000569144 CCDC85AQ96PX6 553 aaPredicted RBP7.61□□□□□ -1.19
CDH13-212ENST00000569144 ARHGAP39Q9C0H5 1083 aa7.61□□□□□ -1.19
CDH13-212ENST00000569144 ELP3Q9H9T3 547 aa7.61□□□□□ -1.19
CDH13-212ENST00000569144 BSDC1Q9NW68 430 aaPredicted RBP7.61□□□□□ -1.19
CDH13-212ENST00000569144 DBF4Q9UBU7 674 aaPredicted RBP7.61□□□□□ -1.19
CDH13-212ENST00000569144 MINPP1Q9UNW1 487 aa7.61□□□□□ -1.19
CDH13-212ENST00000569144 LEMD3Q9Y2U8 911 aa7.61□□□□□ -1.19
CDH13-212ENST00000569144 CLRN2A0PK11 232 aa7.6□□□□□ -1.19
CDH13-212ENST00000569144 ESPNB1AK53 854 aa7.6□□□□□ -1.19
CDH13-212ENST00000569144 FARP2O94887 1054 aaPredicted RBP7.6□□□□□ -1.19
CDH13-212ENST00000569144 ZIC2O95409 532 aaPredicted RBP7.6□□□□□ -1.19
CDH13-212ENST00000569144 GTF2IP78347 998 aa7.6□□□□□ -1.19
CDH13-212ENST00000569144 KRT24Q2M2I5 525 aa7.6□□□□□ -1.19
CDH13-212ENST00000569144 PPP1R26Q5T8A7 1209 aaPredicted RBP7.6□□□□□ -1.19
CDH13-212ENST00000569144 TXNRD3Q86VQ6 643 aa7.6□□□□□ -1.19
CDH13-212ENST00000569144 DEFB123Q8N688 67 aa7.6□□□□□ -1.19
CDH13-212ENST00000569144 CCDC191Q8NCU4 936 aa7.6□□□□□ -1.19
CDH13-212ENST00000569144 ITPKCQ96DU7 683 aa7.6□□□□□ -1.19
CDH13-212ENST00000569144 KLF16Q9BXK1 252 aaPredicted RBP7.6□□□□□ -1.19
CDH13-212ENST00000569144 ZFAND3Q9H8U3 227 aa7.6□□□□□ -1.19
CDH13-212ENST00000569144 VEZTQ9HBM0 779 aa7.6□□□□□ -1.19
CDH13-212ENST00000569144 ZCCHC17Q9NP64 241 aaKnown RBP7.6□□□□□ -1.19
CDH13-212ENST00000569144 HYPKQ9NX55 129 aa7.6□□□□□ -1.19
CDH13-212ENST00000569144 CEP290O15078 2479 aa7.59□□□□□ -1.19
CDH13-212ENST00000569144 CCL5P13501 91 aa7.59□□□□□ -1.19
CDH13-212ENST00000569144 GRK4P32298 578 aa7.59□□□□□ -1.19
CDH13-212ENST00000569144 CTSWP56202 376 aa7.59□□□□□ -1.19
CDH13-212ENST00000569144 RIPK4P57078 832 aa7.59□□□□□ -1.19
CDH13-212ENST00000569144 UBXN2AP68543 259 aa7.59□□□□□ -1.19
CDH13-212ENST00000569144 DHX9Q08211 1270 aaKnown RBP7.59□□□□□ -1.19
CDH13-212ENST00000569144 LMOD3Q0VAK6 560 aa7.59□□□□□ -1.19
CDH13-212ENST00000569144 RASA3Q14644 834 aa7.59□□□□□ -1.19
CDH13-212ENST00000569144 CFAP100Q494V2 611 aa7.59□□□□□ -1.19
CDH13-212ENST00000569144 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.59□□□□□ -1.19
CDH13-212ENST00000569144 STAP2Q9UGK3 403 aa7.59□□□□□ -1.19
CDH13-212ENST00000569144 SRRDQ9UH36 339 aa7.59□□□□□ -1.19
CDH13-212ENST00000569144 DACH1Q9UI36 760 aa7.59□□□□□ -1.19
CDH13-212ENST00000569144 CUL9Q8IWT3 2517 aa7.59□□□□□ -1.19
CDH13-212ENST00000569144 LAMA3Q16787 3333 aa7.59□□□□□ -1.19
CDH13-212ENST00000569144 ERVH48-1M5A8F1 160 aa7.58□□□□□ -1.2
CDH13-212ENST00000569144 CHL1O00533 1208 aa7.58□□□□□ -1.2
CDH13-212ENST00000569144 CETPP11597 493 aa7.58□□□□□ -1.2
CDH13-212ENST00000569144 CAPN2P17655 700 aa7.58□□□□□ -1.2
CDH13-212ENST00000569144 HOXD10P28358 340 aa7.58□□□□□ -1.2
CDH13-212ENST00000569144 BMP8BP34820 402 aa7.58□□□□□ -1.2
CDH13-212ENST00000569144 TNFAIP1Q13829 316 aa7.58□□□□□ -1.2
CDH13-212ENST00000569144 VGLL4Q14135 290 aa7.58□□□□□ -1.2
CDH13-212ENST00000569144 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.58□□□□□ -1.2
CDH13-212ENST00000569144 CERS5Q8N5B7 392 aa7.58□□□□□ -1.2
CDH13-212ENST00000569144 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.58□□□□□ -1.2
CDH13-212ENST00000569144 RAET1EQ8TD07 263 aa7.58□□□□□ -1.2
CDH13-212ENST00000569144 U2AF1L4Q8WU68 220 aaKnown RBP7.58□□□□□ -1.2
CDH13-212ENST00000569144 PRMT6Q96LA8 375 aaPredicted RBP7.58□□□□□ -1.2
CDH13-212ENST00000569144 TRIM47Q96LD4 638 aa7.58□□□□□ -1.2
CDH13-212ENST00000569144 MYD88Q99836 296 aa7.58□□□□□ -1.2
CDH13-212ENST00000569144 GDF15Q99988 308 aa7.58□□□□□ -1.2
CDH13-212ENST00000569144 RNF208Q9H0X6 261 aa7.58□□□□□ -1.2
CDH13-212ENST00000569144 CD209Q9NNX6 404 aa7.58□□□□□ -1.2
CDH13-212ENST00000569144 TMPRSS4Q9NRS4 437 aa7.58□□□□□ -1.2
CDH13-212ENST00000569144 MTMR10Q9NXD2 777 aa7.58□□□□□ -1.2
CDH13-212ENST00000569144 CWC25Q9NXE8 425 aaPredicted RBP7.58□□□□□ -1.2
CDH13-212ENST00000569144 PGPEP1Q9NXJ5 209 aa7.58□□□□□ -1.2
CDH13-212ENST00000569144 CEP126Q9P2H0 1117 aa7.58□□□□□ -1.2
CDH13-212ENST00000569144 RIPOR2Q9Y4F9 1068 aa7.58□□□□□ -1.2
CDH13-212ENST00000569144 PCDHAC2Q9Y5I4 1007 aa7.58□□□□□ -1.2
CDH13-212ENST00000569144 OTOFQ9HC10 1997 aa7.58□□□□□ -1.2
CDH13-212ENST00000569144 ZSWIM8A7E2V4 1837 aa7.57□□□□□ -1.2
CDH13-212ENST00000569144 ECM29Q5VYK3 1845 aa7.57□□□□□ -1.2
CDH13-212ENST00000569144 AOX1Q06278 1338 aa7.57□□□□□ -1.2
CDH13-212ENST00000569144 MYPNQ86TC9 1320 aa7.57□□□□□ -1.2
CDH13-212ENST00000569144 BTBD19C9JJ37 291 aa7.57□□□□□ -1.2
CDH13-212ENST00000569144 SGPL1O95470 568 aa7.57□□□□□ -1.2
CDH13-212ENST00000569144 KLRK1P26718 216 aa7.57□□□□□ -1.2
CDH13-212ENST00000569144 CTGFP29279 349 aa7.57□□□□□ -1.2
CDH13-212ENST00000569144 PSMC4P43686 418 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms