RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 KLHL6Q8WZ60 621 aa8.42□□□□□ -1.06
UBR1-208ENST00000569066 PLVAPQ9BX97 442 aa8.42□□□□□ -1.06
UBR1-208ENST00000569066 ENPP3O14638 875 aa8.42□□□□□ -1.06
UBR1-208ENST00000569066 TNFRSF10CO14798 259 aa8.42□□□□□ -1.06
UBR1-208ENST00000569066 RAG1P15918 1043 aa8.42□□□□□ -1.06
UBR1-208ENST00000569066 TDRD10Q5VZ19 366 aaKnown RBP8.42□□□□□ -1.06
UBR1-208ENST00000569066 XAGE3Q8WTP9 111 aa8.42□□□□□ -1.06
UBR1-208ENST00000569066 MLECQ14165 292 aa8.41□□□□□ -1.06
UBR1-208ENST00000569066 LINC00114Q6XXX2 140 aa8.41□□□□□ -1.06
UBR1-208ENST00000569066 MCATQ8IVS2 390 aaKnown RBP8.41□□□□□ -1.06
UBR1-208ENST00000569066 TMEM87BQ96K49 555 aa8.41□□□□□ -1.06
UBR1-208ENST00000569066 FAM105AQ9NUU6 356 aa8.41□□□□□ -1.06
UBR1-208ENST00000569066 EIF4EBP3O60516 100 aaPredicted RBP8.41□□□□□ -1.06
UBR1-208ENST00000569066 GRIK4Q16099 956 aa8.41□□□□□ -1.06
UBR1-208ENST00000569066 NUTM2GQ5VZR2 741 aa8.41□□□□□ -1.06
UBR1-208ENST00000569066 KIAA1211LQ6NV74 962 aa8.41□□□□□ -1.06
UBR1-208ENST00000569066 PPFIBP1Q86W92 1011 aa8.41□□□□□ -1.06
UBR1-208ENST00000569066 PHACTR4Q8IZ21 702 aa8.41□□□□□ -1.06
UBR1-208ENST00000569066 DTWD1Q8N5C7 304 aa8.41□□□□□ -1.06
UBR1-208ENST00000569066 TAB3Q8N5C8 712 aaPredicted RBP8.41□□□□□ -1.06
UBR1-208ENST00000569066 KIF2CQ99661 725 aa8.41□□□□□ -1.06
UBR1-208ENST00000569066 ADAM30Q9UKF2 790 aa8.41□□□□□ -1.06
UBR1-208ENST00000569066 KDM2BQ8NHM5 1336 aa8.4□□□□□ -1.06
UBR1-208ENST00000569066 FANCGO15287 622 aa8.4□□□□□ -1.06
UBR1-208ENST00000569066 ALX3O95076 343 aa8.4□□□□□ -1.06
UBR1-208ENST00000569066 TKFCQ3LXA3 575 aa8.4□□□□□ -1.06
UBR1-208ENST00000569066 TMEM192Q8IY95 271 aa8.4□□□□□ -1.06
UBR1-208ENST00000569066 ISL2Q96A47 359 aa8.4□□□□□ -1.06
UBR1-208ENST00000569066 LGR4Q9BXB1 951 aa8.4□□□□□ -1.06
UBR1-208ENST00000569066 ZMYM5Q9UJ78 669 aa8.4□□□□□ -1.06
UBR1-208ENST00000569066 CDC45O75419 566 aa8.4□□□□□ -1.07
UBR1-208ENST00000569066 WFS1O76024 890 aa8.4□□□□□ -1.07
UBR1-208ENST00000569066 UBOX5O94941 541 aa8.4□□□□□ -1.07
UBR1-208ENST00000569066 DYMQ7RTS9 669 aa8.4□□□□□ -1.07
UBR1-208ENST00000569066 SLFN12Q8IYM2 578 aa8.4□□□□□ -1.07
UBR1-208ENST00000569066 SLC6A18Q96N87 628 aa8.4□□□□□ -1.07
UBR1-208ENST00000569066 ACTL7BQ9Y614 415 aa8.4□□□□□ -1.07
UBR1-208ENST00000569066 TACC3Q9Y6A5 838 aa8.4□□□□□ -1.07
UBR1-208ENST00000569066 SSRP1Q08945 709 aaKnown RBP8.39□□□□□ -1.07
UBR1-208ENST00000569066 SLBPQ14493 270 aaKnown RBP eCLIP8.39□□□□□ -1.07
UBR1-208ENST00000569066 PRAMEF13Q5VWM6 474 aa8.39□□□□□ -1.07
UBR1-208ENST00000569066 INTS3Q68E01 1043 aaKnown RBP8.39□□□□□ -1.07
UBR1-208ENST00000569066 C12orf50Q8NA57 414 aaPredicted RBP8.39□□□□□ -1.07
UBR1-208ENST00000569066 RNF214Q8ND24 703 aa8.39□□□□□ -1.07
UBR1-208ENST00000569066 ZNF512BQ96KM6 892 aaPredicted RBP8.39□□□□□ -1.07
UBR1-208ENST00000569066 C9IYK1 514 aa8.38□□□□□ -1.07
UBR1-208ENST00000569066 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.38□□□□□ -1.07
UBR1-208ENST00000569066 BAHD1Q8TBE0 780 aaPredicted RBP8.38□□□□□ -1.07
UBR1-208ENST00000569066 RNF208Q9H0X6 261 aa8.38□□□□□ -1.07
UBR1-208ENST00000569066 TIAF1O95411 115 aa8.38□□□□□ -1.07
UBR1-208ENST00000569066 TP53P04637 393 aaPredicted RBP8.38□□□□□ -1.07
UBR1-208ENST00000569066 RAC1P63000 192 aa8.38□□□□□ -1.07
UBR1-208ENST00000569066 SOX4Q06945 474 aaPredicted RBP8.38□□□□□ -1.07
UBR1-208ENST00000569066 SLC10A6Q3KNW5 377 aa8.38□□□□□ -1.07
UBR1-208ENST00000569066 GNPTABQ3T906 1256 aa8.38□□□□□ -1.07
UBR1-208ENST00000569066 HP1BP3Q5SSJ5 553 aaPredicted RBP8.38□□□□□ -1.07
UBR1-208ENST00000569066 MRPL41Q8IXM3 137 aaKnown RBP8.38□□□□□ -1.07
UBR1-208ENST00000569066 PHAXQ9H814 394 aaKnown RBP8.38□□□□□ -1.07
UBR1-208ENST00000569066 PTCH2Q9Y6C5 1203 aa8.38□□□□□ -1.07
UBR1-208ENST00000569066 C2orf27AQ580R0 203 aa8.37□□□□□ -1.07
UBR1-208ENST00000569066 HID1Q8IV36 788 aa8.37□□□□□ -1.07
UBR1-208ENST00000569066 ZNF775Q96BV0 537 aaPredicted RBP8.37□□□□□ -1.07
UBR1-208ENST00000569066 TMEM260Q9NX78 707 aa8.37□□□□□ -1.07
UBR1-208ENST00000569066 ZNF214Q9UL59 606 aaPredicted RBP8.37□□□□□ -1.07
UBR1-208ENST00000569066 SUSD5O60279 629 aa8.37□□□□□ -1.07
UBR1-208ENST00000569066 HNRNPUQ00839 825 aaKnown RBP eCLIP8.37□□□□□ -1.07
UBR1-208ENST00000569066 SUGCTQ9HAC7 445 aa8.37□□□□□ -1.07
UBR1-208ENST00000569066 LGR6Q9HBX8 967 aa8.37□□□□□ -1.07
UBR1-208ENST00000569066 RNGTTO60942 597 aaKnown RBP8.36□□□□□ -1.07
UBR1-208ENST00000569066 NCLP19338 710 aaKnown RBP8.36□□□□□ -1.07
UBR1-208ENST00000569066 ASPAP45381 313 aa8.36□□□□□ -1.07
UBR1-208ENST00000569066 YARSP54577 528 aaKnown RBP8.36□□□□□ -1.07
UBR1-208ENST00000569066 PLEKHG4Q58EX7 1191 aa8.36□□□□□ -1.07
UBR1-208ENST00000569066 EEPD1Q7L9B9 569 aa8.36□□□□□ -1.07
UBR1-208ENST00000569066 C2CD4AQ8NCU7 369 aaPredicted RBP8.36□□□□□ -1.07
UBR1-208ENST00000569066 CYP4F12Q9HCS2 524 aa8.36□□□□□ -1.07
UBR1-208ENST00000569066 SLC12A7Q9Y666 1083 aa8.36□□□□□ -1.07
UBR1-208ENST00000569066 PREPP48147 710 aa8.36□□□□□ -1.07
UBR1-208ENST00000569066 SLC7A5Q01650 507 aa8.36□□□□□ -1.07
UBR1-208ENST00000569066 SMG8Q8ND04 991 aaKnown RBP8.36□□□□□ -1.07
UBR1-208ENST00000569066 ST13P5Q8NFI4 369 aaPredicted RBP8.36□□□□□ -1.07
UBR1-208ENST00000569066 SYNGAP1Q96PV0 1343 aa8.35□□□□□ -1.07
UBR1-208ENST00000569066 MEGF11A6BM72 1044 aa8.35□□□□□ -1.07
UBR1-208ENST00000569066 DCAF15Q66K64 600 aa8.35□□□□□ -1.07
UBR1-208ENST00000569066 ZNF507Q8TCN5 953 aa8.35□□□□□ -1.07
UBR1-208ENST00000569066 APPBP2Q92624 585 aa8.35□□□□□ -1.07
UBR1-208ENST00000569066 ATXN3LQ9H3M9 355 aa8.35□□□□□ -1.07
UBR1-208ENST00000569066 PIDD1Q9HB75 910 aa8.35□□□□□ -1.07
UBR1-208ENST00000569066 RGS13O14921 159 aa8.34□□□□□ -1.07
UBR1-208ENST00000569066 PPP1R12AO14974 1030 aaPredicted RBP8.34□□□□□ -1.07
UBR1-208ENST00000569066 ARHGEF15O94989 841 aa8.34□□□□□ -1.07
UBR1-208ENST00000569066 FAM153BP0C7A2 387 aa8.34□□□□□ -1.07
UBR1-208ENST00000569066 ELNP15502 786 aa8.34□□□□□ -1.07
UBR1-208ENST00000569066 RAB6AP20340 208 aa8.34□□□□□ -1.07
UBR1-208ENST00000569066 C21orf62-AS1Q17RA5 79 aa8.34□□□□□ -1.07
UBR1-208ENST00000569066 FDX2Q6P4F2 183 aa8.34□□□□□ -1.07
UBR1-208ENST00000569066 IGF2-ASQ6U949 168 aa8.34□□□□□ -1.07
UBR1-208ENST00000569066 GNB5O14775 395 aa8.34□□□□□ -1.07
UBR1-208ENST00000569066 ADCY3O60266 1144 aa8.34□□□□□ -1.07
UBR1-208ENST00000569066 EPHX1P07099 455 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms